Ggra8794.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra8794.t1 vs. uniprot
Match: A0A2V3IX96 (RRM domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX96_9FLOR) HSP 1 Score: 435 bits (1119), Expect = 3.640e-148 Identity = 249/421 (59.14%), Postives = 298/421 (70.78%), Query Frame = 0
Query: 1 MDDDWASDGEEEGLGDLSDIPDIDIPPQQRQNPTPPQKPLPSAAHHRPPXXRQNAWTKPIQSQHVRSAVQQP------PNPRGHHRRQNSFPSSFGSKLDRFDSDPGRQQQRAPSAPSITLYVTNLPYETNEQAIGDFFSVNTIQVFGIRLMRHSDTGNIKAALVTIAADHVTKALDTDGKLFGGRTIHVKVDGTDGKRGGRDRDRGERGHNRTPSFGSSFGSRVAA-NGSSRSGAGWNNRGPGHXXXXXXXXXXXXXXXXXXXXXXXXXXKDPTIPTGPPPAGRKKLQLMPRTKPPPGLHVDQRGANAPKAPQTAMPAPGRQENDSFSDQKGSAAPRRVNSTGGDRFN-RNDSNTDKFDLVERRDRGGKPSDESASKWTNMKETNVPRPSSQPASKKEDDSKRPVLLNTFAALELNDSDA 413
MDDDWAS+GEEEGLGDLSDIPD+D+P Q + P P P P A P RQNAWTKP QSQ VRSAVQ P P R HRRQNSFP+SFGS L+R R Q R+ + P+ TLYVTNLPY+T+EQAIGDFF+ +++ V GIRL++H DTGNI+AALVT+ ADHV KAL DG++FGGRTI+VK+DGTDGKRG R GER +R PSFGSSFG+R NG++RS + W++RGPGH KDP+IP GPPPAGRKKLQLMPRTKPPP L VDQR + K PQ+AMPAPGRQ+++ FS + PRRVNS GG+R + R D ++D+FD V+RRDRG + D+S +KWTN KET RPSSQP +KKEDDSKRPVL NTFAAL++ D DA
Sbjct: 1 MDDDWASEGEEEGLGDLSDIPDVDLPVQIK-TPLPEPTPQPPA----PVVPRQNAWTKPNQSQQVRSAVQSPAQHQQQPQGRALHRRQNSFPASFGSNLERPSQPAPRHQPRSHTGPTTTLYVTNLPYQTHEQAIGDFFTASSVHVVGIRLVKHPDTGNIRAALVTVVADHVPKALAVDGRMFGGRTIYVKIDGTDGKRGAR----GERSQSRNPSFGSSFGTRAPPLNGNARSSS-WHDRGPGHSIDSQLTRRASDNRDDRRSRLAPLA-KDPSIPVGPPPAGRKKLQLMPRTKPPPELQVDQRAISQQKPPQSAMPAPGRQDSEKFSQNRAGPPPRRVNSYGGERSSTRGDRSSDRFDRVDRRDRGPRM-DDSRNKWTNSKETATSRPSSQPTAKKEDDSKRPVLQNTFAALDIKDPDA 409
BLAST of Ggra8794.t1 vs. uniprot
Match: R7Q424 (Possible translation initiation factor eIF4, subunit H n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q424_CHOCR) HSP 1 Score: 140 bits (352), Expect = 3.510e-34 Identity = 132/361 (36.57%), Postives = 164/361 (45.43%), Query Frame = 0
Query: 100 PGRQQQRAPSAPS-------ITLYVTNLPYETNEQAIGDFFSVNTIQVFGIRLMRHSDTGNIKAALVTIAAD-HVTKALDTDGKLFGGRTIHVKVDGTDGKRGGRDRDRGERGHNRTPSFGSSFGSRVAANGSSRSG--------AGWNNRGPGHXXXXXXXXXXXXXXXXXXXXXXXXXX--------KDPTIPTGPPPAGRKKLQLMPRTKPPPGLHVDQRGANA--PKAPQTAMPAPGRQENDSFSDQKGSAAPRRVNSTGGDRFNRNDSNTDKFDLVERRDRGGK---PSDESASKWTNMKETNV--------------PRPSS---QPASKKEDDSK-RPVLLNTFAALELNDSDA 413
PG +R PS+P+ TLYV +LP++T+E I F + + L RH+DTGNIKAALVTI + +++ L DG GR +HVKVDG GG R+R G FGS A SS G +GW +R G +DPTIPTGPPPAGRKKL L PRTKPPP L VD R + P P + R EN SD + A R+ G R L E D K P+D KWT K+ P+ +S Q ++KK+DDSK RPVLLNTFAALE+ND+DA
Sbjct: 23 PGMAPRRQPSSPASAPAGSTTTLYVFHLPFDTSEVEIASLFRHCAVTPADVHLTRHNDTGNIKAALVTIRGEENLSAGLAVDGAKLSGRPVHVKVDGDRRGSGGGQRERSGYG------FGSKDRRMEAMPSSSPHGGQRDSTWSSGWTDRSGGGGFDQSSRGERGVEGRSAGASRGAGVTPRGASEQREDPTIPTGPPPAGRKKLVLKPRTKPPPVLEVDTRAIDGVKPSVPSSVSQPRHRFEN---SDPSKNLAMRQ---NSGPRVT--------APLSEGADPNPKEVTPADPKVEKWTTPKDATAKTQGERWSSAKEGAPQKASGTAQGSNKKDDDSKKRPVLLNTFAALEVNDADA 363 The following BLAST results are available for this feature:
BLAST of Ggra8794.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra8794.t1 ID=Ggra8794.t1|Name=Ggra8794.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=414bpback to top |