Ggra8791.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra8791.t1
Unique Name	Ggra8791.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	300

Homology

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BLAST of Ggra8791.t1 vs. uniprot
Match: A0A2V3IUG9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUG9_9FLOR)

HSP 1 Score: 227 bits (579), Expect = 1.270e-70
Identity = 127/263 (48.29%), Postives = 171/263 (65.02%), Query Frame = 0

Query:   39 MEVVIATSILAHAGSLAIDRFAPKFDA-ALSRSRETNQPQTPVTQSEPXXXXXXXXXASPVLERENAENSPXXXXXNSCSQPEPVEEGSVEFLQQRLKQLRNDAKKLNAPDTLVQYARVTREANKVEKALNEKKAEQGLSATSSMGIDAMTSALAEMMKPGA-GVVRQGVTSQMLRMIPRIISFIFLWYYFSFQDTSTGKGIAMAVDCQALRPISFLFRKLPPTCFDDDWVCAAQTSQSPMCAISYSWAFILCNVVISVLLQA 299
            MEVVIATS++AH G LA+DR+  K +A A+         Q  ++ S+P              + E+A   P              EEGS+EFL+ RLK+LRN AK+LNAPDTLVQYARVTREANKVEK +NEKKA +G++   S  +DA++ A   M+ PGA  VVR+ + SQMLR +PR++ F FLWYYFS++  +  +G  M +DC+ALRP+S+LFRK    C +++WVCAAQ    P CAISYSWA + CN+VI+ + +A
Sbjct:    1 MEVVIATSLIAHFGVLAVDRYIAKLEASAVGDVPHATDEQQTISSSQPQGNES-------ATKNESAVTKP--------------EEGSIEFLEMRLKELRNQAKRLNAPDTLVQYARVTREANKVEKDVNEKKAAEGITEEPSANVDALSRAFTSMVTPGATSVVRRRINSQMLRTVPRVLGFAFLWYYFSWRSGALRQGNVMTIDCEALRPLSWLFRKQWRMCSEEEWVCAAQR---PQCAISYSWALVFCNMVIATIFKA 239

[Close]

BLAST of Ggra8791.t1 vs. uniprot
Match: R7Q5M8 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5M8_CHOCR)

HSP 1 Score: 142 bits (359), Expect = 1.400e-37
Identity = 92/261 (35.25%), Postives = 136/261 (52.11%), Query Frame = 0

Query:   39 MEVVIATSILAHAGSLAIDRFAPKFDAALSRSRETNQPQTPVTQSEPXXXXXXXXXASPVLERENAENSPXXXXXNSCSQPEPVEEGSVEFLQQRLKQLRNDAKKLNAPDTLVQYARVTREANKVEKALNEKKAEQGLSATSSMGIDAMTSALAEMMKPGAGVVRQGVTSQMLRMIPRIISFIFLWYYFSFQDTSTGKGIAMAVDCQALRPISFLFRKLPPTCFDDDWVCAAQTSQSPMCAISYSWAFILCNVVISVLLQA 299
            MEVV+  S L++  +L ID +A +    L +      P  P T ++          A+P  +    E           +  E   EGS+  L++++K LR +AK++NAPDT VQYAR+TREANKVEK L EKKA +      ++  D M      +       +++     +L+ I R + F+ LW+YFS      G   A+ +DC+A RP+SF+F K  P+C DD W+CAAQ    P CA+SY    +L N V  ++ QA
Sbjct:    1 MEVVLLGSALSNLCALLIDAYASRAQRPLIQP-----PAEPDTTTQRASNSKDRVEAAPASDANPQE-----------ADAEQFPEGSIPALEKKVKHLRAEAKRVNAPDTFVQYARLTREANKVEKELTEKKALEPSDTHGTVLPDVMAMLSKAVTPQAQSSMKRRAQFMVLKAIVRALPFLLLWWYFSPFGYDRGPADALVIDCRAFRPLSFIFSKREPSCGDDHWMCAAQP---PQCAVSYWMVLVLANTVFPMIFQA 242

The following BLAST results are available for this feature:

BLAST of Ggra8791.t1 vs. uniprot

BLAST of Ggra8791.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IUG9	1.270e-70	48.29	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7Q5M8	1.400e-37	35.25	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 153..173
None	No IPR available	COILS	Coil	Coil	coord: 127..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 67..131
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..121
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 298..299
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 279..297
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..209
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 210..227
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 228..278

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000860_pilon	contig	tig00000860_pilon:127017..128030 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra8791.t1	Ggra8791.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000860_pilon 127017..128030 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra8791.t1 ID=Ggra8791.t1|Name=Ggra8791.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=300bp
MIDENSKFFQQAAFLIDYIVIMKINPQHNIVADTLPFNMEVVIATSILAH
AGSLAIDRFAPKFDAALSRSRETNQPQTPVTQSEPQPEPQPQPQASPVLE
RENAENSPQQQSSNSCSQPEPVEEGSVEFLQQRLKQLRNDAKKLNAPDTL
VQYARVTREANKVEKALNEKKAEQGLSATSSMGIDAMTSALAEMMKPGAG
VVRQGVTSQMLRMIPRIISFIFLWYYFSFQDTSTGKGIAMAVDCQALRPI
SFLFRKLPPTCFDDDWVCAAQTSQSPMCAISYSWAFILCNVVISVLLQA*