Ggra8790.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8790.t1
Unique NameGgra8790.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length360
Homology
BLAST of Ggra8790.t1 vs. uniprot
Match: A0A2V3IUH7 (Replication factor C subunit 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUH7_9FLOR)

HSP 1 Score: 555 bits (1429), Expect = 6.170e-197
Identity = 284/347 (81.84%), Postives = 313/347 (90.20%), Query Frame = 0
Query:    1 MKDSA-QLWVEKYRPRAVSDVAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKVVRDKIKVFAQIAVSSNVATKGSDGKSYPCPPYKVVILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNPLPLEAMKAHLHKIANAEHVNVSEETLESLIEASEGDLRKAINTMQSAQRIQSDAALDIDSISAAACLVPPSVVDAFDNSITAKGTTNASVRKAVDEILVEGYSSGQLLTQYADRLIGRIASPGINKLNDLQKAAMALVIADAENALIDGCDEKVQLYDIASRVSRIA 346
            MK++A QLWVEKYRPRAVS+VAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQ+YRSRVLELNASDERGIKVVRDKIKVFAQIAV SNV TKG DGK+YPCPPYK++ILDEADAIT DAQTALRRTME +SRVTRFIIICNY+SRIIGPLASRCAKFRFNPLP++AMK H+ +IA  E V VS+ETL+ LI +S+GDLRKAINTMQSA R+QSD  LD+DSISAAACLVPPSVV AFD + TAKG TN SVRKAVDEIL EGYS  QLL QYADRL  R  S G++K+ND+QKA++ALVIA AE ALIDGCDEK+QLYD+AS +SRIA
Sbjct:    1 MKEAAAQLWVEKYRPRAVSEVAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQHYRSRVLELNASDERGIKVVRDKIKVFAQIAVVSNVNTKGPDGKTYPCPPYKIIILDEADAITRDAQTALRRTMEVYSRVTRFIIICNYVSRIIGPLASRCAKFRFNPLPMDAMKGHMRRIAKDEGVKVSDETLKFLIHSSDGDLRKAINTMQSAHRMQSDTDLDMDSISAAACLVPPSVVAAFDKATTAKGHTNTSVRKAVDEILSEGYSPIQLLAQYADRLNRRTQSEGVSKMNDMQKASLALVIASAEKALIDGCDEKIQLYDVASSISRIA 347          
BLAST of Ggra8790.t1 vs. uniprot
Match: R7Q2F6 (AAA domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2F6_CHOCR)

HSP 1 Score: 468 bits (1205), Expect = 5.560e-160
Identity = 236/351 (67.24%), Postives = 282/351 (80.34%), Query Frame = 0
Query:    2 KDSAQLWVEKYRPRAVSDVAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKVVRDKIKVFAQIAVSSNVATKGSDGKSYPCPPYKVVILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNPLPLEAMKAHLHKIANAEHVNVSEETLESLIEASEGDLRKAINTMQSAQRIQS--DAALDIDSISAAACLVPPSVVDAFDNSITAKGTTNASVRKAVDEILVEGYSSGQLLTQYADRLIGRIASPGINKLNDLQKAAMALVIADAENALIDGCDEKVQLYDIASRVSRIASTAD 350
            ++ +QLWVEKYRPR ++DV HQ++VV+TLQ+AV E AGRG+LPHLL YGPPGTGKTSTALAL RDLFG QN R+RVLELNASDERGIKVVRDKIK FAQ  VS+ V  K  D + YPCP +KVVILDEADAIT DAQTALRRTMEAHS+VTRFI+ICNYISRIIGPL SRCAKFRFN +P+ AM  HL  IA  E V+++++TL SLIE SEGDLRKAINTMQSA R+ S    +LD+D ISA ACL+PP V+D FD      G TN+ VRK VDEI+++GYS  QLL+QY DRL+      GI  +NDLQ++A+A+++ADAE  L DGCDEK+QLY++AS++SRIA   D
Sbjct:  192 REGSQLWVEKYRPRKITDVTHQDQVVSTLQRAVTESAGRGELPHLLFYGPPGTGKTSTALALVRDLFGVQNLRARVLELNASDERGIKVVRDKIKTFAQTTVSNPVPAKHGDTRKYPCPAFKVVILDEADAITIDAQTALRRTMEAHSKVTRFILICNYISRIIGPLTSRCAKFRFNSIPMHAMMGHLKGIAKREGVDIADDTLRSLIETSEGDLRKAINTMQSAHRMHSMTKGSLDMDMISAVACLIPPRVLDMFDAKTAEVGLTNSEVRKVVDEIVMDGYSVSQLLSQYGDRLLKDDGCDGIRDMNDLQRSAVAVILADAEKGLNDGCDEKLQLYNVASKISRIAGMKD 542          
BLAST of Ggra8790.t1 vs. uniprot
Match: replication factor C subunit 2-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2BC3 (replication factor C subunit 2-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2BC3)

HSP 1 Score: 367 bits (943), Expect = 3.020e-123
Identity = 200/345 (57.97%), Postives = 253/345 (73.33%), Query Frame = 0
Query:    8 WVEKYRPRAVSDVAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFG-PQNYRSRVLELNASDERGIKVVRDKIKVFAQIAVSSNVATKGSDGKSYPCPPYKVVILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNPLPLEAMKAHLHKIANAEHVNVSEETLESLIEASEGDLRKAINTMQSAQRIQSDAA-LDIDSISAAACLVPPSVVDAFDNSITAKGTTNASVRKAVDEILVEGYSSGQLLTQYADRLIGRIASPGINKLNDLQKAAMALVIADAENALIDGCDEKVQLYDIASRVSRIASTAD 350
            WVEKYRPR V +V+HQEEVVATLQ+ V   A  GD+PH+LLYGPPGTGKTS ALALCRDLFG  + YRSRVLELNASDERGI+VVR+KIK FAQ +VS+    KG+ GKS   PP+KV++LDEADAIT DAQTALRRTME HSR TRFI+ICNY+SRII PLASRCAKFRF PLP  AM   L  +A  E VNV ++TL  LI+AS GDLRKAI T+QS  RI    A +    I+ AACLVP  V++ FD S      ++ ++R+ V+ I+ +GYSS +LL++Y+ R++      G+ KLN +QKAA+++ +A A+  L+DG DE +Q+Y + S+++      D
Sbjct:    9 WVEKYRPRTVGEVSHQEEVVATLQRIVHSGAAHGDMPHMLLYGPPGTGKTSAALALCRDLFGIGEVYRSRVLELNASDERGIQVVREKIKTFAQRSVSA--IPKGA-GKSMT-PPFKVIVLDEADAITADAQTALRRTMETHSRTTRFILICNYVSRIIAPLASRCAKFRFKPLPSRAMFDRLQFVAKEESVNVLDDTLHDLIDASGGDLRKAITTLQSTHRITKPGAEVSSSDIANAACLVPKEVLEDFDVSSVNPSMSHKALREKVNSIVRDGYSSAELLSRYSLRIMNADGI-GVAKLNGVQKAAISIAVAQADANLVDGADELLQMYSVLSKITTAVRNPD 348          
BLAST of Ggra8790.t1 vs. uniprot
Match: A0A5J4YXB4 (Replication factor C subunit 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXB4_PORPP)

HSP 1 Score: 338 bits (866), Expect = 1.940e-111
Identity = 184/343 (53.64%), Postives = 240/343 (69.97%), Query Frame = 0
Query:    8 WVEKYRPRAVSDVAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKVVRDKIKVFAQIAVSSNVATKGSDGKSYPCPPYKVVILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNPLPLEAMKAHLHKIANAEHVNVSEETLESLIEASEGDLRKAINTMQSAQRIQSDAA-LDIDSISAAACLVPPSVVDAFDNSITAKGTTNASVRKAVDEILVEGYSSGQLLTQYADRLIGRIASPGINKLNDLQKAAMALVIADAENALIDGCDEKVQLYDIASRVSRIASTA 349
            W EKYRP+ V+ VAHQ+EVV  L  A+ +  G+G+LPHLL YGPPGTGKTSTALALCR +FG Q++++RVLELNASDERGIKVVRD+IK FAQ +V     T    G++ P   +K++ILDEADAITTDAQTALRRTME  S  TRFI+ICNYISRII PLASRCAK RF PLP+ AM+AHL  IA+ E +++S + L+ + EASEGD+R+AI T+QS  R+      +D +++  AACLVP SV+D F+ ++    +    +   +  I+ +GYS  QL+ Q+  R I       I  L+DLQK+A+ L +A+AE  +IDG DE +QL DI  R+      A
Sbjct:    9 WSEKYRPQKVAQVAHQDEVVRMLSSALDD--GQGNLPHLLFYGPPGTGKTSTALALCRQMFGAQHFKARVLELNASDERGIKVVRDRIKTFAQTSVPEGRITNKETGRAVPA--FKIIILDEADAITTDAQTALRRTMETFSLTTRFILICNYISRIIAPLASRCAKCRFMPLPMSAMRAHLSHIASGEGLSISTQLLDHMCEASEGDMRRAITTLQSTSRMAGPGGDMDDEALVTAACLVPESVLDDFEAAVLGSCSFK-DMSLVLTNIVDDGYSVSQLILQFGRR-IQENTRASIAGLSDLQKSAVVLKLAEAEAQMIDGADEWLQLQDIGGRLRETVQCA 345          
BLAST of Ggra8790.t1 vs. uniprot
Match: D2VRF7 (Predicted protein n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VRF7_NAEGR)

HSP 1 Score: 321 bits (822), Expect = 5.730e-105
Identity = 174/353 (49.29%), Postives = 242/353 (68.56%), Query Frame = 0
Query:    4 SAQLWVEKYRPRAVSDVAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKVVRDKIKVFAQIAVSSNVATKGSDGKSYPCPPYKVVILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNPLPLEAMKAHLHKIANAEHVNVSEE-TLESLIEASEGDLRKAINTMQSAQRIQSDAALDIDSISAAACLVPPSVVDAFDNSITAKGTTNASV-RKAVDEILVEGYSSGQLLTQYADRLIGRIASPGINKLNDLQKAAMALVIADAENALIDGCDEKVQLYDIASRVSRIAST-ADGDI 353
            S Q W EKYRP+ V DV HQEEVV+ L+K+++     G+LPHLL YGPPG GKTSTA A+ + LFGP+ Y++RVLELNASDERGI V+R K+K FAQ AVS N   KG     YPCPP+K++ILDEAD++T DAQ+ALRRTME +S VTRF +ICNY+SRII P+ SRCAKFRF PL    +K  L  IAN E + + +E  L++++  SEGDLRKAI T+QSA R+  +A +  + I+  + LVP  +++     +T    T+  V R  V++I+ +G+++ Q++TQ    L+         K++D+Q++ + L I++ +  LIDG DE +QL  +AS +S+   T ADGD+
Sbjct:    5 SQQPWTEKYRPKTVDDVVHQEEVVSALKKSLEV----GNLPHLLFYGPPGNGKTSTATAIAKQLFGPELYKTRVLELNASDERGINVIRTKVKTFAQTAVSENPTGKGK----YPCPPFKIIILDEADSMTVDAQSALRRTMETYSNVTRFCLICNYVSRIIDPITSRCAKFRFKPLEYSLLKERLQYIANQEGITLKDEKVLDTIVGHSEGDLRKAITTLQSASRMFGNA-ISQNHIAEISGLVPDEIIEEI---LTLSQQTDLGVIRSGVNKIIKQGFAAYQIITQLGRYLLSEACCV---KMDDIQRSKILLKISECDKCLIDGADEFLQLLSLASYISKTLQTDADGDV 342          
BLAST of Ggra8790.t1 vs. uniprot
Match: A0A1X6P2U3 (AAA domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P2U3_PORUM)

HSP 1 Score: 317 bits (813), Expect = 2.600e-103
Identity = 183/360 (50.83%), Postives = 238/360 (66.11%), Query Frame = 0
Query:    8 WVEKYRPRAVSDVAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQN---YRSRVLELNASDERGIKVVRDKIKVFAQIAVSSNVATKGSDGKSYPCPPYKVVILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNPLPLEAMKAHLHKIANAEHVNVSEETLESLIEASEGDLRKAINTMQSAQRIQSDA-ALDIDSISAAACLVPPSVVDAFDNSITAKGTTNASVRKAVDEILVEGYSSGQLLTQYADRLIGRIASP----GINKLNDLQKAAMALVIADAENALIDGCDEKVQLYDIASRVSRIASTADGDIAALQKA 359
            WVEKYRP +++DV HQ + V+TL ++V   + R +LPHLLLYGPPGTGKTSTALAL R+L+GP     Y +RVLELNASDERGI VVR +I  FA  AV +   T       +P PPYK++ILDEADA+T DAQTALRR ME  SRVTRFI+ICNY+SR+I PLASRCAKFRF PLP  A+   L  IA AE V++  +  ++L+ A+ GDLR+AI  +QSA R+   A  L  D+I+AAAC +P  VV   + +  A G   A VR AV+ ++  GY++  +L +   R+ G         G+  +NDLQKAA+A+ +ADAE  LIDG DE +QL D+   +  I   A+  +  L  A
Sbjct:   14 WVEKYRPTSIADVRHQAQAVSTLTRSVA--SARANLPHLLLYGPPGTGKTSTALALARELYGPPGSAAYTARVLELNASDERGIAVVRHRINTFAAGAVHTAYTTPAG----HPTPPYKLIILDEADAVTADAQTALRRAMETTSRVTRFILICNYVSRVIPPLASRCAKFRFAPLPAAAVGDTLDSIAGAEGVDLPSDGRDTLVAAAGGDLRRAITLLQSAARVAGPADPLTPDAIAAAACTLPAEVVSGLE-AAAASGQFGA-VRDAVEGVVAGGYAATSVLVELGRRVAGESGGVDVKGGVASMNDLQKAAVAVKLADAERRLIDGADETLQLLDVGCCLMVIGRNAESPMLILPSA 365          
BLAST of Ggra8790.t1 vs. uniprot
Match: A0A0C3KV79 (AAA domain-containing protein n=2 Tax=Pisolithus TaxID=37467 RepID=A0A0C3KV79_PISTI)

HSP 1 Score: 313 bits (803), Expect = 9.000e-102
Identity = 177/359 (49.30%), Postives = 233/359 (64.90%), Query Frame = 0
Query:    6 QLWVEKYRPRAVSDVAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKVVRDKIKVFAQIAVSSNVATKGSDGKSYPCPPYKVVILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNPLPLEAMKAHLHKIANAEHVNVSEETLESLIEASEGDLRKAINTMQSAQRIQSDA----ALDIDSISAAACLVPPSVV-------------DAFDNSITAKGTTNASVRKAVDEILVEGYSSGQLLTQYADRLIGRIASPGINKLNDLQKAAMALVIADAENALIDGCDEKVQLYDIASRVSRIAS 347
            Q W+EKYRP+ + DV+ QE  V  L+KA+       +LPH+L YGPPGTGKTST LAL R LFGP N+R+RVLELNASDERGI VVR+KIK FA+    +  A   SDGKSYPCPPYK++ILDEAD++T DAQ ALRR ME ++R+TRF ++CNY++RII PLASRC+KFRF PL   +  + L  IA AEHV V+ E + +LI+AS GDLR++I  +QSA R+ S A     +    I   A +VP +VV             D   +++T K     +++K V E++ EGYS  QLL+Q  D +I     P        QKA  ALVIA+A+ AL DG DE++ L ++A +  +  S
Sbjct:   21 QPWIEKYRPKTIDDVSAQEHTVTVLRKALLST----NLPHMLFYGPPGTGKTSTILALARQLFGPDNFRNRVLELNASDERGISVVREKIKTFARQTPRAQAAN--SDGKSYPCPPYKIIILDEADSMTQDAQGALRRIMETYARITRFCLVCNYVTRIIEPLASRCSKFRFTPLDPLSTSSRLTHIAAAEHVEVTPEVVTTLIDASNGDLRRSITYLQSASRLSSSADPPTPITPRDIQEIAGVVPTTVVNDLARTLGLDVSSDMIVDAVTPKRRGFDAIQKKVKEVIREGYSVAQLLSQLHDLIIHHQMLPA------RQKATCALVIAEADKALCDGADEELWLLEVAMQTYKALS 367          
BLAST of Ggra8790.t1 vs. uniprot
Match: A0A5C3MP24 (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Crucibulum laeve TaxID=68775 RepID=A0A5C3MP24_9AGAR)

HSP 1 Score: 313 bits (802), Expect = 1.400e-101
Identity = 175/363 (48.21%), Postives = 233/363 (64.19%), Query Frame = 0
Query:    6 QLWVEKYRPRAVSDVAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKVVRDKIKVFAQIAVSSNVATKGSDGKSYPCPPYKVVILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNPLPLEAMKAHLHKIANAEHVNVSEETLESLIEASEGDLRKAINTMQSAQRIQSDA-------ALDIDSISAAACLVPPSVVDAF--------DNSITAKGTTNA------SVRKAVDEILVEGYSSGQLLTQYADRLIGRIASPGINKLNDLQKAAMALVIADAENALIDGCDEKVQLYDIASRVSRIAS 347
            Q WVEKYRP+ + +V+ QE  VA LQK +       +LPH+L YGPPGTGKTST LAL R LFGP N+R+RVLELNASDERGI +VR+KIK FA+    +      SDGK+YPCPPYK++ILDEAD++T DAQ ALRR ME ++R+TRF ++CNY++RII PLASRC+KFRF PL   +  + LH IA AEH+ V    +++LI  S GDLR+AI  +QSA R+ S         A DI  I+    +VP SV++ F        DNS+   G+ N       S++  V  ++ EGYS+ Q+L+Q  D +I          LN  QK+  +LV A+A+ AL DG DE++ + +I  RV +  S
Sbjct:   24 QPWVEKYRPKTIDEVSAQEHTVAVLQKTLTST----NLPHMLFYGPPGTGKTSTILALARQLFGPDNFRNRVLELNASDERGISIVREKIKNFARQTPRAQAVA--SDGKTYPCPPYKIIILDEADSMTQDAQGALRRIMETYARITRFCLVCNYVTRIIEPLASRCSKFRFTPLDSASSSSRLHHIATAEHIEVDSTVIDTLISTSVGDLRRAITYLQSASRLSSSTNPPTPITAADIQEIAG---VVPDSVINDFASVLGVEMDNSMDVDGSQNQKSTGFESIKNKVKYLMREGYSATQILSQLHDLIILHPT------LNGRQKSLCSLVFAEADKALCDGADEELWVLEIGLRVQKAVS 371          
BLAST of Ggra8790.t1 vs. uniprot
Match: W4KI05 (AAA domain-containing protein n=1 Tax=Heterobasidion irregulare (strain TC 32-1) TaxID=747525 RepID=W4KI05_HETIT)

HSP 1 Score: 311 bits (798), Expect = 4.360e-101
Identity = 171/349 (49.00%), Postives = 235/349 (67.34%), Query Frame = 0
Query:    6 QLWVEKYRPRAVSDVAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKVVRDKIKVFAQIAVSSNVATKGSDGKSYPCPPYKVVILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNPLPLEAMKAHLHKIANAEHVNVSEETLESLIEASEGDLRKAINTMQSAQRIQSDAALDIDSISAA-----ACLVPPSVVDAFDNSITAKGTTNAS-VRKAVDEILVEGYSSGQLLTQYADRLIGRIASPGINKLNDLQKAAMALVIADAENALIDGCDEKVQLYDIASRVSRIAST 348
            Q WVEKYRP+ + DV+ QE ++A L+K +       +LPH+L YGPPGTGKTST LAL R LFGP N+RSRVLELNASDERGI +VR+KIK FA+   +    T  SDGK+YPCPPYK++ILDEAD++T DAQ ALRR ME ++R+TRF ++CNY++RII PLASRC+KFRF PL   +  A L  IAN EH+ VS   L +LI  S GDLR+AI  +QSA R+ S A++  + I+A      A +VP S+V  F  ++  +       +R+ V  ++ EGYS+ Q+L+Q  D +I          L   +K+  ALV+A+A+ AL DG DE++ + ++A R+++  S+
Sbjct:   28 QPWVEKYRPKTIDDVSSQEHIIAVLEKTLTST----NLPHMLFYGPPGTGKTSTILALARQLFGPDNFRSRVLELNASDERGISIVREKIKNFAR--QTPRATTVASDGKTYPCPPYKIIILDEADSMTQDAQGALRRIMETYARITRFCLVCNYVTRIIEPLASRCSKFRFKPLDATSSSARLQHIANDEHITVSPPVLSALISTSNGDLRRAITYLQSAARL-SAASIPPEPITARDVQEIAGVVPDSIVHDFARALGIETLRGFDLIREKVRMLMREGYSASQILSQLHDLIILHPT------LASREKSKCALVMAEADKALCDGADEELWILEVALRINKAISS 363          
BLAST of Ggra8790.t1 vs. uniprot
Match: A0A6A5BIW9 (AAA domain-containing protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BIW9_NAEFO)

HSP 1 Score: 309 bits (792), Expect = 1.780e-100
Identity = 168/352 (47.73%), Postives = 235/352 (66.76%), Query Frame = 0
Query:    4 SAQLWVEKYRPRAVSDVAHQEEVVATLQKAVKEPAGRGDLPHLLLYGPPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKVVRDKIKVFAQIAVSSNVATKGSDGKSYPCPPYKVVILDEADAITTDAQTALRRTMEAHSRVTRFIIICNYISRIIGPLASRCAKFRFNPLPLEAMKAHLHKIANAEHVNVSEET-LESLIEASEGDLRKAINTMQSAQRIQSDAALDIDSISAAACLVPPSVVDAFDNSITAKGTTNASVRKAVDEILVEGYSSGQLLTQYADRLIGRIASPGINKLNDLQKAAMALVIADAENALIDGCDEKVQLYDIASRVSRIAST-ADGDI 353
            S QLW EKYRP+ V DV HQEEVV  L+ +++E    G+LPHLL YGPPG GKTSTA A+ + LFGP+ Y+SRVLELNASDERGI V+R K+K FAQ AVS N  +KG     YPCPP+K++ILDEAD++T DAQ+ALRRTME +S VTRFI+ICNY+SRII P+ SRCAKFRF PL    +K  L  IA+ E +++ +   L+ ++  SEGDLRKAI T+QSA R+   +  +   +  +  +    +V+    S   K      ++K V++++ +GY++ Q++ Q A  ++         KL+D+QK+ + L IA  +  LIDG DE +QL  + S +++ +   +DGD+
Sbjct:    2 SQQLWTEKYRPKTVDDVVHQEEVVNALKHSLQE----GNLPHLLFYGPPGNGKTSTATAIAKQLFGPELYKSRVLELNASDERGINVIRTKVKQFAQTAVSENPPSKGK----YPCPPFKIIILDEADSMTVDAQSALRRTMETYSSVTRFILICNYVSRIIDPITSRCAKFRFKPLDNTLLKERLQMIADKEGISLQDTAVLDRIVSHSEGDLRKAITTLQSASRMFGFSIAEKHIVEISGTVPQELIVNILKLS---KEQDINVIKKEVEKVIKQGYAAYQIINQLASYILSDKCEV---KLDDIQKSKILLKIASCDKCLIDGADELLQLLSLVSFMAQTSGVDSDGDV 339          
The following BLAST results are available for this feature:
BLAST of Ggra8790.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUH76.170e-19781.84Replication factor C subunit 4 n=1 Tax=Gracilariop... [more]
R7Q2F65.560e-16067.24AAA domain-containing protein n=1 Tax=Chondrus cri... [more]
replication factor C subunit 2-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D2BC33.020e-12357.97replication factor C subunit 2-like n=1 Tax=Mercen... [more]
A0A5J4YXB41.940e-11153.64Replication factor C subunit 2 n=1 Tax=Porphyridiu... [more]
D2VRF75.730e-10549.29Predicted protein n=1 Tax=Naegleria gruberi TaxID=... [more]
A0A1X6P2U32.600e-10350.83AAA domain-containing protein n=1 Tax=Porphyra umb... [more]
A0A0C3KV799.000e-10249.30AAA domain-containing protein n=2 Tax=Pisolithus T... [more]
A0A5C3MP241.400e-10148.21P-loop containing nucleoside triphosphate hydrolas... [more]
W4KI054.360e-10149.00AAA domain-containing protein n=1 Tax=Heterobasidi... [more]
A0A6A5BIW91.780e-10047.73AAA domain-containing protein n=2 Tax=Naegleria Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 42..182
e-value: 4.2E-13
score: 59.5
IPR013748Replication factor C, C-terminalPFAMPF08542Rep_fac_Ccoord: 264..340
e-value: 1.4E-7
score: 31.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..179
e-value: 2.2E-51
score: 175.9
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..231
NoneNo IPR availableGENE3D1.10.8.60coord: 182..245
e-value: 3.2E-14
score: 54.3
NoneNo IPR availableGENE3D1.20.272.10coord: 247..345
e-value: 5.0E-16
score: 60.7
NoneNo IPR availablePANTHERPTHR11669:SF20REPLICATION FACTOR C SUBUNIT 4coord: 3..344
NoneNo IPR availablePANTHERPTHR11669REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNITcoord: 3..344
NoneNo IPR availableCDDcd00009AAAcoord: 23..179
e-value: 3.73817E-22
score: 89.5127
NoneNo IPR availableCDDcd18140HLD_clamp_RFCcoord: 180..226
e-value: 8.48611E-13
score: 60.6205
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 46..177
e-value: 2.9E-15
score: 56.8
IPR008921DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalSUPERFAMILY48019post-AAA+ oligomerization domain-likecoord: 248..344

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:125689..126768 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8790.t1Ggra8790.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 125689..126768 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8790.t1 ID=Ggra8790.t1|Name=Ggra8790.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=360bp
MKDSAQLWVEKYRPRAVSDVAHQEEVVATLQKAVKEPAGRGDLPHLLLYG
PPGTGKTSTALALCRDLFGPQNYRSRVLELNASDERGIKVVRDKIKVFAQ
IAVSSNVATKGSDGKSYPCPPYKVVILDEADAITTDAQTALRRTMEAHSR
VTRFIIICNYISRIIGPLASRCAKFRFNPLPLEAMKAHLHKIANAEHVNV
SEETLESLIEASEGDLRKAINTMQSAQRIQSDAALDIDSISAAACLVPPS
VVDAFDNSITAKGTTNASVRKAVDEILVEGYSSGQLLTQYADRLIGRIAS
PGINKLNDLQKAAMALVIADAENALIDGCDEKVQLYDIASRVSRIASTAD
GDIAALQKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR013748Rep_factorC_C
IPR027417P-loop_NTPase
IPR003959ATPase_AAA_core
IPR008921DNA_pol3_clamp-load_cplx_C