Ggra8787.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8787.t1
Unique NameGgra8787.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length361
Homology
BLAST of Ggra8787.t1 vs. uniprot
Match: A0A2V3IUE7 (Putative assembly chaperone of rpl4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUE7_9FLOR)

HSP 1 Score: 429 bits (1104), Expect = 1.590e-147
Identity = 239/352 (67.90%), Postives = 287/352 (81.53%), Query Frame = 0
Query:    1 MSPVPRKTRHSRRSTSKSSRRVKHKASKRPSPASVDELLRDAKTCEATGRMQEXXXXXXXXXXXXXXXXXXXXXXXXXXMQVTRPDDALRALRIAIKLKPNEGFEKYAYLAQLLGNTEEAILSARKGIELIKMEIMNIDKSQEVRVQELREFQASAHCAIAEICLGIIEESNDHALAKKLDVEVEKEIMEALTISIEGSVSEQESLIALANLRLSQGRAIDAKQAMERVLRSMSYGLKLLEQDNLSDAVVISAMEKLPPMEIRIAVGKQLMEVGLWLEAEAVLSSIMYECDFNVEVWYLLAVTHWKRKQLSEARECLKQTRAILQRPDGYDGELEEEMIDKLYEELEKISND 352
            MSP  + T+H+RR  S+S+RR K KA K+    SV++LLRDA+  EA+G +Q XXXXXXXXXX                MQ TR DDA RALRIAI L+P  GFEKYAYLAQLLGNTEEA+  ARKG ELI+ +IM++DKSQ  R+QELR++QASAHCA AEICLG+IEESND ALA+++DVEVE EIMEAL +S EGS SEQE+LIALANLRLSQGR  DAK AM RVL  MS GL +LE+++++D V++ AME LP MEIRIAVGKQLMEV +W EAE+VLSS+MYECDFNVEVWYLLA+THWKRKQLSEARECL+QTRAIL+RPDGYDGEL+++M+D+LYEEL+ IS++
Sbjct:    1 MSPGQKHTQHARRYASRSTRRKK-KALKQSPTVSVEDLLRDARVHEASGNIQXXXXXXXXXXXLRSTDAALYEELASLYMQATRSDDADRALRIAISLQPESGFEKYAYLAQLLGNTEEAVSYARKGTELIRADIMSLDKSQHDRIQELRQYQASAHCATAEICLGVIEESNDPALAERMDVEVENEIMEALALSTEGSDSEQEALIALANLRLSQGREFDAKDAMVRVLGRMSDGLSMLEREDIADDVIVIAMESLPAMEIRIAVGKQLMEVKMWAEAESVLSSVMYECDFNVEVWYLLAITHWKRKQLSEARECLEQTRAILRRPDGYDGELDDDMVDRLYEELDTISDE 351          
BLAST of Ggra8787.t1 vs. uniprot
Match: R7QGX6 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGX6_CHOCR)

HSP 1 Score: 295 bits (756), Expect = 5.250e-96
Identity = 152/255 (59.61%), Postives = 197/255 (77.25%), Query Frame = 0
Query:   93 RIAIKLKPNEGFEKYAYLAQLLGNTEEAILSARKGIELIKMEIMNIDKSQE-VRVQELREFQASAHCAIAEICLGIIEESNDHALAKKLDVEVEKEIMEALTISIEGSVSEQESLIALANLRLSQGRAIDAKQAMERVLRSMSYGLKLLEQDNLSDAVVISAMEKLPPMEIRIAVGKQLMEVGLWLEAEAVLSSIMYECDFNVEVWYLLAVTHWKRKQLSEARECLKQTRAILQRPDGYDGELEEEMIDKLYEEL 346
            R +I+ +PN GFEKYAYLAQLLGNTEE +  AR+GIE+IK E  +ID   E  R+ EL++++ASAHCAIAEICLGIIE+SND  +A KLDVEVEK +M A+ +S EGS SE E++++LANLRLSQGR  DA ++M+RVL  MS GL++LE  + SD ++  A+ +LP +E RIAVGKQL+EV +W  A   LSS+M+ECDFNVEVWYLLAV +WK  +  EA+  L  TRA+L+ PDG+DGEL+E MI KL ++L
Sbjct:    3 RTSIRNEPNSGFEKYAYLAQLLGNTEEGLQMARRGIEVIKAESRSIDSEMEHERIMELQQYEASAHCAIAEICLGIIEDSNDQEVATKLDVEVEKSVMAAIGLSEEGSESEVEAMLSLANLRLSQGRRDDAVESMKRVLLRMSPGLEMLETGDQSDVIIAEALSRLPSLEFRIAVGKQLIEVEMWRAAIVNLSSVMWECDFNVEVWYLLAVAYWKLGEFKEAQSVLISTRAVLRSPDGFDGELDEAMIGKLEQQL 257          
BLAST of Ggra8787.t1 vs. uniprot
Match: A0A5J4XHP5 (Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XHP5_9CHLO)

HSP 1 Score: 80.9 bits (198), Expect = 2.170e-13
Identity = 71/257 (27.63%), Postives = 118/257 (45.91%), Query Frame = 0
Query:   87 DALRALRIAIKLKPNEGFEKYAYLAQLLGNTEEAILSARKGIELIKMEIMNIDKSQEVRVQELREFQASAHCAIAEICLGIIEESNDHALAKKLDVEVEKEIMEALTISIEGSVSEQESLIALANLRLSQGRAIDAKQAMERVLRSMSYGLKLLEQDNLSDAVVISAME-----------KLPPMEIRIAVGKQLMEVGLWLE-AEAVLSSIMYECDFNVEVWYLLAVTHWKRKQLSEARECLKQTRAILQRPDGYD 331
            D +  L+ A++ +PNEGFEKY YL QLL   E+A+ S RKGI++++ ++  +   ++   +E  E  + A CA+AE  LG  EE +           V  E  + L  +        E L  LA+L++ Q +  +A Q +   ++     L+ +  D+                      +LP  E R    K L+E+    E A  +L S++ E D    VWY+LA+      Q   A E L+  + +L++ +  D
Sbjct:   72 DGITILQEAVRQQPNEGFEKYMYLGQLLDG-EDAVASIRKGIQILQWQVDTLGGDEQ---EEASEQLSGALCALAERLLGSGEELDS----------VAAECQQLLNRAGRIFPDSPEPLQVLASLKVEQQKPDEALQHLRESMQKWFPSLQRMLADSXXXXXXXXXXXXXXXXXXXXXAQLPSFEFRFETAKLLIELDETTEKAVLILDSLIEEDDSVPNVWYMLAMCLLGGGQTEAAAEALQHGQKLLRKQEDAD 314          
BLAST of Ggra8787.t1 vs. uniprot
Match: D8LE28 (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE28_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 2.300e-12
Identity = 71/225 (31.56%), Postives = 103/225 (45.78%), Query Frame = 0
Query:   85 PDDALRALRIAIKLKPNEGFEKYAYLAQLLGNTEEAILSARKGIELIKMEIMNIDKSQEVRVQE--LREFQASAHCAIAEICLGIIEESNDHALAKKLDVEVEKEIMEALTISIEGSVSEQESLIALANLRLSQGRAIDAKQAMERVLRSMSYGLKLLEQDNLSDAVVISAMEKLPPMEIRIAVGKQLMEVGLWLE-----AEAVLSSIMYECDFNVEVWYLLAV 302
            P  A   L  +I L P EG +KY Y+AQL     EA+    KG+EL++ ++ +   +   +  E  LR+    A+C++AE+ +  +    D           E    +AL  SI       E L A+ANLRLSQ R  +A Q+ E   R ++                    E  P  E R+++ K LME     +     A  VLS +M E D NVE+WYL+AV
Sbjct:   89 PAAAKEVLARSILLGPEEGPDKYLYMAQL-HEGREALGHYEKGLELLRKQLADGGGAGGTKEAEAALRQRACMAYCSVAELFMTDLCFEED----------AETRCQDALDGSIRYDYGGPEPLNAVANLRLSQSRPEEAAQSAEEAFRRLAL------------------CEPPPDHEFRVSLAKVLMECSSVNKSCSDKALQVLSGLMQEDDENVELWYLMAV 284          
BLAST of Ggra8787.t1 vs. uniprot
Match: A0A7S0VD79 (Hypothetical protein n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0VD79_9CHLO)

HSP 1 Score: 77.4 bits (189), Expect = 3.760e-12
Identity = 79/292 (27.05%), Postives = 129/292 (44.18%), Query Frame = 0
Query:   81 QVTRPDDALRALRIAIKLKPNEGFEKYAYLAQLLGNTEEAILSARKGIELIKMEIMNIDKSQEVRVQELREFQASAHCAIAEICLGIIEESNDHALAKKLDVEVEKEIMEALTISIEGSVSEQESLIALANLRLSQGRAIDAKQAMERVLRSMSYGLKLL---------------EQDNLSDAVVISAMEK---------LPPMEIRIAVGKQLMEVGLWLEAEA-VLSSIMYECDFNVEVWYLLAVTHWKRKQLSEARECLKQTRAILQRPDGYDGELEEEMIDKLYEELE 347
            ++  P +AL ALR A+ L P+ GFEKY YL Q+L   ++A+ +  KGI++++    +         +ELR     A C+ AE  L   EE +           V  ++            +  E   ALA+LR  QGR+ +A   ++    SM    K+                + DN       +AM++         LP  E RI   K L+++     A   VL  ++ E D N + W+LLA+  +  +Q  EA + L + +A++ +  G   + E   +  L+EELE
Sbjct:   73 EIGPPKEALLALRHAVNLSPDVGFEKYLYLGQILEG-KDALEATHKGIQVLQKTFESAQAQGMPEAEELRGALVGALCSFAEQLLNEAEEVDA----------VTAQVXXXXXXXXXXXPTSPEPGQALASLRNEQGRSAEALAILKE---SMKLWFKVSPEAGEEGKEGDKATGDNDNXXXXXXXAAMDEDEGEDPTNGLPSYEFRIECAKLLLDLDESTTAAIDVLEGLVEEDDSNPDAWHLLALAFYGGRQYVEASDVLAKGKALIAKL-GVPSDAE---VVTLFEELE 346          
BLAST of Ggra8787.t1 vs. uniprot
Match: A0A0R3T6A1 (Uncharacterized protein n=1 Tax=Rodentolepis nana TaxID=102285 RepID=A0A0R3T6A1_RODNA)

HSP 1 Score: 76.3 bits (186), Expect = 9.800e-12
Identity = 70/240 (29.17%), Postives = 119/240 (49.58%), Query Frame = 0
Query:   80 MQVTRPDDALRALRIAIKLKPNEGFEKYAYLAQLLGNTEEAILSARKGIELIKMEIMNIDKSQEVRVQELREFQASAHCAIAEICL-GIIEESNDHALAKKLDVEVEKEIMEALTISIEGSVSEQESLIALANLRLSQGRAIDAKQAMERVLRSM---------------SYGLKLLEQDNL-SDAVVISAMEKLPPMEIRIAVGKQLMEVGLWLEAEAVLSSIMYECDFNVEVWYLLAV 302
            +Q  R D+A+   + AI++ P+ G+EKY  LAQLL   EEA+   R+GI +I   +   D +    +Q L+   + AHCA+AE+ +  + ++SN+ AL       V++E+ +A+ I  +  +S        A+     GR  DAK A+E+ L                     +++LE D L +D   IS M    P E    +   L E+G++ +AE +L+ +    + N +V + LA+
Sbjct:   80 VQFERTDEAISHFKRAIEICPDNGYEKYMSLAQLLAG-EEAVNLYRRGIGIINDLLKTFDSNDSSGLQSLKSDLSFAHCAVAEVYMVDLCDDSNNSAL-------VQQEVDKAIEICEQNPLS----WYIKASCLFLTGRIDDAKSAIEKCLSLFLPEIERIFDEQIEREDTPVEVLEGDKLIADIEEISGM----PPEKHFEMTLLLCELGMYQQAEKILTLLNEIEEANPDVLFQLAL 303          
BLAST of Ggra8787.t1 vs. uniprot
Match: A0A0R3W3A9 (TPR_REGION domain-containing protein n=1 Tax=Taenia asiatica TaxID=60517 RepID=A0A0R3W3A9_TAEAS)

HSP 1 Score: 75.1 bits (183), Expect = 2.520e-11
Identity = 69/235 (29.36%), Postives = 110/235 (46.81%), Query Frame = 0
Query:   86 DDALRALRIAIKLKPNEGFEKYAYLAQLLGNTEEAILSARKGIELIKMEIMNIDKSQEVRVQELREFQASAHCAIAEICLGIIEESNDHALAKKLDVEVEKEIMEALTISIEGSVSEQESLIALANLRLSQGRAIDAKQAMER--------------VLRSMSYGLKLLEQDNLS----DAVVISAMEKLPPMEIRIAVGKQLMEVGLWLEAEAVLSSIMYECDFNVEVWYLLAV 302
            ++A   L+ A++L P+EG+EKY YLAQ+     EA+   RKGI +I   +   D +      +LR   ++A+CAI+++    + +          + E E    EA+  + E   S  +     ANL   + +  +AKQA+E+              VLRS   G      DN      D   IS +    P E  I + K ++E+ ++  A  VL +++ E D +VEV YLL V
Sbjct:   89 EEAKENLQKAVQLSPDEGYEKYMYLAQI-SEGSEAVDLYRKGIGIINRSLEATDGAASSLKDKLRRALSNAYCAISDLYTTDLCD----------EPEAESSCREAIEKATETDESNPQVWFCAANLLTIKAQDDEAKQALEKCLSLYWPQVEQVVSVLRSRENGGGAATGDNGEVEELDLEEISGI----PYEAHIQMVKMMIELDMFERAAEVLEAMLEEDDEHVEVLYLLTV 308          
BLAST of Ggra8787.t1 vs. uniprot
Match: A0A7S4B8P0 (Hypothetical protein n=3 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B8P0_CHRCT)

HSP 1 Score: 70.5 bits (171), Expect = 6.730e-10
Identity = 64/243 (26.34%), Postives = 121/243 (49.79%), Query Frame = 0
Query:   80 MQVTRPDDALRALRIAIKLKPNEGFEKYAYLAQLLGNTEEAILSARKGIELIKMEIMNIDKSQEVRVQELREFQASAHCAIAEICLGIIEESNDHALAKKLDVEVEKEIMEALTISIEGSVSEQ---ESLIALANLRLSQGRAIDAKQAMERVLRSMSYGLKLLEQDNLSDAVVISAMEKLPPMEIRIAVGKQLMEVGLWLEAEAVLSSIMYECDFNVEVWYLLAVTHWKRKQLSEARECLKQ 319
            +Q  + +DA  AL+ +I+L P+    +Y YL QL    E+A+   ++GI+ ++ E   ++ +   +    RE+ A+ +   A +C        D     + D E++ E +    + +   + +Q   E    +A+LRLSQ R  DA+  + + L             ++++++  SA +  P +E+R A+ K LMEVG+  EA  +L  +  E D ++E+WYL+     +  +L  A+  L+Q
Sbjct:   65 LQAGQVEDAKVALQRSIELSPDGTASRYMYLGQL-AEGEKALGWFQQGIQRLRSERAALEGAGGSKDDLRREWLAATNALAAGLCAEAEIYLTD--ACDEDDAEMKCEALATEALLLVSGIDKQTLPEPYQTMASLRLSQQRPEDAEALLAKAL-------------SITESLEGSAQQ--PSLEMRTALSKLLMEVGMSAEALDLLQELRLEDDESLELWYLVVCAALQSGELEIAQAELEQ 289          
BLAST of Ggra8787.t1 vs. uniprot
Match: A0A2V0NXH9 (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NXH9_9CHLO)

HSP 1 Score: 70.9 bits (172), Expect = 8.600e-10
Identity = 49/150 (32.67%), Postives = 76/150 (50.67%), Query Frame = 0
Query:   81 QVTRPDDALRALRIAIKLKPNEGFEKYAYLAQLLGNTEEAILSARKGIELIKMEIMNIDKSQEVRVQELREFQASAHCAIAEICLGIIEESNDHALAKKLDVEVEKEIMEALTISIEGSVSEQESLIALANLRLSQGRAIDAKQAMERVL 230
            +V R ++A+  LR A++  P++GFEKY YL QLL   EEA+ + R+G+E     +++       R  ELR    SA C++AE+ +   E+            EV  E+   L  +     +  E L ALA+LR  QGR  +A   + + L
Sbjct:  103 EVGRAEEAVEVLRSAVEASPDDGFEKYMYLGQLLEG-EEALAATRRGVE-----VLSAAADAAPRAAELRRQLCSALCSLAEMTMAAAEDP----------AEVGDEVGSLLERARAADAASPEPLQALASLRYEQGRQDEALSLLRQSL 236          
BLAST of Ggra8787.t1 vs. uniprot
Match: A0A0R3WJ75 (Uncharacterized protein n=1 Tax=Hydatigena taeniaeformis TaxID=6205 RepID=A0A0R3WJ75_HYDTA)

HSP 1 Score: 69.3 bits (168), Expect = 1.910e-9
Identity = 63/259 (24.32%), Postives = 124/259 (47.88%), Query Frame = 0
Query:   84 RPDDALRALRIAIKLKPNEGFEKYAYLAQLLGNTEEAILSARKGIELIKMEIMNIDKSQEVRVQE-LREFQASAHCAIAEICLGIIEESNDHALAKKLDVEVEKEIMEALTISIEGSVSEQESLIALANLRLSQGRAIDAKQAMER--------------VLRSMSYG-LKLLEQDNLSDAVVISAMEKLPPMEIRIAVGKQLMEVGLWLEAEAVLSSIMYECDFNVEVWYLLAVTH---WKRKQLSEARECLKQTRAI 323
            R ++A   L+ A++L P+EG+EKY YLAQ+     EA+   + GI++IK  +    ++ ++ +QE L+   ++A+CAI+EI    + +          + E E   +EA+  + +   S  ++ ++ AN+   + R  +A+QA+E+               +RS   G    ++ D    A  +  +  +P     + +   +ME+ ++  A  +L +++ E D +VE++Y L V     W        R   + TR +
Sbjct:   87 RFEEAKENLQKAVELSPDEGYEKYMYLAQM-SKGSEAVALYQVGIDIIKRSLEATSET-DISIQEKLKRALSNAYCAISEIYTTDLCD----------EPEAESCCLEAVENAKQADESNPQAWLSAANVLAIKARDDEARQALEKCHSLYWPRVEQAISTIRSRESGSANAVDNDEEIGAFDLEELSGIP-FGAHLQMATLMMELDMFERAAEILEAMLEEDDGDVEIFYFLTVIGKKLWVNSDPDRLRHVAEATREL 332          
The following BLAST results are available for this feature:
BLAST of Ggra8787.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A2V3IUE71.590e-14767.90Putative assembly chaperone of rpl4 n=1 Tax=Gracil... [more]
R7QGX65.250e-9659.61Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4XHP52.170e-1327.63Uncharacterized protein n=1 Tax=Trebouxia sp. A1-2... [more]
D8LE282.300e-1231.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S0VD793.760e-1227.05Hypothetical protein n=1 Tax=Polytomella parva Tax... [more]
A0A0R3T6A19.800e-1229.17Uncharacterized protein n=1 Tax=Rodentolepis nana ... [more]
A0A0R3W3A92.520e-1129.36TPR_REGION domain-containing protein n=1 Tax=Taeni... [more]
A0A7S4B8P06.730e-1026.34Hypothetical protein n=3 Tax=Chrysotila carterae T... [more]
A0A2V0NXH98.600e-1032.67Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A0R3WJ751.910e-924.32Uncharacterized protein n=1 Tax=Hydatigena taeniae... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 294..327
e-value: 2.6
score: 17.0
coord: 35..68
e-value: 220.0
score: 3.1
coord: 69..102
e-value: 3.3
score: 16.7
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 295..319
e-value: 0.11
score: 12.7
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 69..102
score: 9.4994
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 183..349
e-value: 8.6E-7
score: 30.7
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 21..144
e-value: 7.4E-13
score: 50.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 32..322
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000860_piloncontigtig00000860_pilon:118051..119133 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8787.t1Ggra8787.t1Gracilaria gracilis GNS1m malemRNAtig00000860_pilon 118051..119133 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8787.t1 ID=Ggra8787.t1|Name=Ggra8787.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=361bp
MSPVPRKTRHSRRSTSKSSRRVKHKASKRPSPASVDELLRDAKTCEATGR
MQEAVSKMENAVSLKSDDAGLYEDLASLYMQVTRPDDALRALRIAIKLKP
NEGFEKYAYLAQLLGNTEEAILSARKGIELIKMEIMNIDKSQEVRVQELR
EFQASAHCAIAEICLGIIEESNDHALAKKLDVEVEKEIMEALTISIEGSV
SEQESLIALANLRLSQGRAIDAKQAMERVLRSMSYGLKLLEQDNLSDAVV
ISAMEKLPPMEIRIAVGKQLMEVGLWLEAEAVLSSIMYECDFNVEVWYLL
AVTHWKRKQLSEARECLKQTRAILQRPDGYDGELEEEMIDKLYEELEKIS
NDPSEGAPLQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf