Ggra855.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra855.t1
Unique NameGgra855.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length135
Homology
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BLAST of Ggra855.t1 vs. uniprot
Match: A0A2V3IFN7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFN7_9FLOR)

HSP 1 Score: 128 bits (322), Expect = 9.750e-36
Identity = 65/129 (50.39%), Postives = 88/129 (68.22%), Query Frame = 0 
Query:    6 IVFISLLAVALASPTTLPAKPYAVNVTDTPEMVGLCKPDFVEFVITPVATCFCNALLNDVISVNSKDVVEDDCLSFFGSKKAILDVDEPCDGFMTEKRWLNIVLVETLVNVIYKKCFPEFLFMATITKH 134
            +VF+   A+A A+PT        V+    P MVG+CKP F E VI PVA CFCNAL ND++SVN ++  E DCL+FFGS++AIL ++ PCDGFMT    L + L+E L+NVI KKCFP+ +F   +T++
Sbjct:    6 LVFVWCFALAFAAPTLPSVNTRQVS----PGMVGVCKPAFTEAVIVPVARCFCNALFNDIVSVNVQERAESDCLAFFGSEEAILALENPCDGFMTGDGSLKVHLIEVLLNVIRKKCFPDDVFEVIVTEN 130
The following BLAST results are available for this feature:
BLAST of Ggra855.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IFN79.750e-3650.39Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000178_piloncontigtig00000178_pilon:189782..190186 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra855.t1Ggra855.t1Gracilaria gracilis GNS1m malemRNAtig00000178_pilon 189782..190186 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra855.t1 ID=Ggra855.t1|Name=Ggra855.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=135bp
MNSSSIVFISLLAVALASPTTLPAKPYAVNVTDTPEMVGLCKPDFVEFVI
TPVATCFCNALLNDVISVNSKDVVEDDCLSFFGSKKAILDVDEPCDGFMT
EKRWLNIVLVETLVNVIYKKCFPEFLFMATITKH*
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