Ggra8504.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8504.t1
Unique NameGgra8504.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length428
Homology
BLAST of Ggra8504.t1 vs. uniprot
Match: A0A2V3ITA6 (General transcription factor IIH subunit n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITA6_9FLOR)

HSP 1 Score: 719 bits (1857), Expect = 7.220e-260
Identity = 337/424 (79.48%), Postives = 385/424 (90.80%), Query Frame = 0
Query:    1 MASRSRGRVLADVDKDDEDMKRIREGYSWESSKIRSWEQIEEDPETGRLKSYQIEHQRAKKKTRDDGPSGVRRGIIRFCVIIIDMSQSLRSTDLKPSRADLVVDSIQSFVKEFFDQNPISQLSLVMTRDGKAVRLSTFSSNEKHHIEAVQKASRLGPGGNASLQNSLIVAKNNLASVPPYGMKEIIISYSSLSTCDPGDIHQTIDSLVSEKIRCSAIGLGAELYILRCLTKKAGGTYVIARNEEHFRDSWTGHIIPPPTVNRQVNASLIRMGFPMLERLEQPALYCNNPNLKGRFGYHCPRCSAWISEIPSECALCGLTLVSSPHLARSYHHLFPVPRFVTLEESEQYFLQSNGARSEADTERVTELVNTDAVRCTGCKTMLRKDKALRLLCPNCLNVFCIDCDSFIHDSLHHCPGCGNQTLRN 424
            MA R RGR+L DVDKD+E+ +RIREGY+WESSKIRSWEQIEEDPETGRLKSYQIE Q A++K RDDGPSGVRRG+IRFCV++IDMSQSLR+TDLKPSRADLVVDSIQ FV+EFFDQNPISQLS+V TRDG+A+RLS FSSNEKHHIEA+QKASRLGPGGN SLQN+L V+ +NLASVPPYGMKEII+SY SLSTCDPGDIH+TID+LVSEKIRCSAIGLGAEL+ILR LTK+  GTYVIARNEEHFR+SW+ H++PPPT NRQV+ASLIRMGFPMLERLEQPALYCNNPNLKGRFGYHCPRCSAW SE+PSECALCGLTLVSSPHLARSYHHLFPVP+F+ L++     L+ +G  ++   +R+TEL++ ++ RCTGCKT++RKD AL LLCP CLNVFCI+CDSFIHDSLHHCPGCGNQ + N
Sbjct:    1 MAGRLRGRMLVDVDKDEEETRRIREGYAWESSKIRSWEQIEEDPETGRLKSYQIEDQIARRKIRDDGPSGVRRGVIRFCVVVIDMSQSLRATDLKPSRADLVVDSIQCFVREFFDQNPISQLSVVTTRDGQALRLSNFSSNEKHHIEAIQKASRLGPGGNPSLQNALTVSNSNLASVPPYGMKEIIVSYGSLSTCDPGDIHKTIDTLVSEKIRCSAIGLGAELHILRVLTKRTNGTYVIARNEEHFRESWSSHVVPPPTTNRQVSASLIRMGFPMLERLEQPALYCNNPNLKGRFGYHCPRCSAWTSELPSECALCGLTLVSSPHLARSYHHLFPVPKFIALKDQSLEDLRLSGLEADKHEQRITELLSVESARCTGCKTLMRKDNALHLLCPKCLNVFCIECDSFIHDSLHHCPGCGNQGVLN 424          
BLAST of Ggra8504.t1 vs. uniprot
Match: R7Q7Q8 (General transcription factor IIH subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7Q8_CHOCR)

HSP 1 Score: 580 bits (1496), Expect = 5.270e-205
Identity = 266/400 (66.50%), Postives = 334/400 (83.50%), Query Frame = 0
Query:   19 DMKRIREGYSWESSKIRSWEQIEEDPETGRLKSYQIEHQRAKKKTRDDGPSGVRRGIIRFCVIIIDMSQSLRSTDLKPSRADLVVDSIQSFVKEFFDQNPISQLSLVMTRDGKAVRLSTFSSNEKHHIEAVQKASRLGPGGNASLQNSLIVAKNNLASVPPYGMKEIIISYSSLSTCDPGDIHQTIDSLVSEKIRCSAIGLGAELYILRCLTKKAGGTYVIARNEEHFRDSWTGHIIPPPTVNRQVNASLIRMGFPMLERLEQPALYCNNPNLKGRFGYHCPRCSAWISEIPSECALCGLTLVSSPHLARSYHHLFPVPRFVTLEESEQYFLQSNGARSEADTERVTELVNTDAVRCTGCKTMLRKDKALRLLCPNCLNVFCIDCDSFIHDSLHHCPGCG 418
            ++KR +E Y+WESS +RSW+QIEEDPETG+LKS+  E Q A+K++RDDG +GVRRGIIRFCV+IIDMS+ +R+TDLKPSRADL  +S+ SF KE+FDQNPISQLS+VMTRD +A++LS+FSSNEKHHIEA++KA RLGP G ASLQN+L +A  NL++VPPY MKE+I+ Y SLSTCDPGDIH TI+ L S K+RCSA+GLGAEL+ILR LTK   GTY IA NEEHFRDS   H+IPPPT  +QV+ASLIRMG+P+L+R+++P LYCNNP+++GR GY+CPRCS W+SE+P EC LCGLTLVSSPHLARSYHHLFPVP+F++LE S+   L+      EA   +  +L+  D +RCTGC  +L K+ +LRLLCP+C+ VFC+DCD+F+HDSLHHCPGCG
Sbjct:   22 ELKRAKEAYAWESSNVRSWDQIEEDPETGKLKSFVREKQIARKRSRDDGFTGVRRGIIRFCVLIIDMSEHVRATDLKPSRADLFCESVSSFAKEYFDQNPISQLSVVMTRDYEAIKLSSFSSNEKHHIEAMRKALRLGPSGAASLQNALKIANKNLSTVPPYAMKEVIVCYGSLSTCDPGDIHATINLLASSKVRCSAVGLGAELHILRVLTKSTNGTYSIAMNEEHFRDSLGSHVIPPPTTTKQVSASLIRMGYPILQRIDEPTLYCNNPSVRGRLGYNCPRCSGWLSEMPCECTLCGLTLVSSPHLARSYHHLFPVPKFISLETSD-LDLRLQSKEDEAKFAKAMKLLPIDVLRCTGCAKLLEKEASLRLLCPSCVKVFCVDCDAFVHDSLHHCPGCG 420          
BLAST of Ggra8504.t1 vs. uniprot
Match: A0A7S3EFP8 (General transcription factor IIH subunit n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EFP8_9RHOD)

HSP 1 Score: 342 bits (878), Expect = 1.490e-111
Identity = 188/421 (44.66%), Postives = 257/421 (61.05%), Query Frame = 0
Query:   12 DVDKDDEDMKRIRE-----GYSWESSKIRSWEQIEEDPETGRLKSYQIEHQRAKKKTRDDGPSGVRRGIIRFCVIIIDMSQSLRSTDLKPSRADLVVDSIQSFVKEFFDQNPISQLSLVMTRDGKAVRLSTFSSNEKHHI-EAVQKASRLGPGGNASLQNSLIVAKNNLASVPPYGMKEIIISYSSLSTCDPGDIHQTIDSLVSEKIRCSAIGLGAELYILRCLTKKAGGTYVIARNEEHFRDSWTGHIIPPPTVNRQVNASLIRMGFPMLERLEQPALYCN-NPNLKG-----RFGYHCPRCSAWISEIPSECALCGLTLVSSPHLARSYHHLFPVPRFVTLEESEQYFLQSNGARSEADTERVTELVNTDAVRCTGC-KTMLRKDKALRLLCPNCLNVFCIDCDSFIHDSLHHCPGCGN 419
            D+DKDDE  +  +E     GY+WES   RSWE+I+ED E+GR+++   +    +++ R     G++RGI+R+ V+ ID S+S+  +D+KPSR   V+   + FV+EFF+QNPI+ L++V T  G A +++   S+ +    E    A +    G ASLQN L ++K  L  VPPYG KE+I+ +SSLST DPGDI  T +SL    IRCS +GL AE+YILR + KK GG Y +A NEEHF +    H+ PPP  +  + ASL+ MGFP L+ L+    Y + N N KG     + GY CPRC +W+S++P EC LCGLTL++SPHLARSYHHLFP+P F                      + VT    + A RC GC K  L  D   +  C +C NVFC +CD FIHDSLH+CPGC +
Sbjct:    7 DIDKDDEFTREEQEAKKKKGYAWESQD-RSWERIQED-ESGRIRAVGADDPATRRQRRQALIPGIKRGIVRYAVLAIDASESMNDSDMKPSRGIAVLTICEQFVQEFFEQNPIAHLAIVATFRGSATQVAAIGSSPQALCSELSTMAEKASFRGEASLQNLLELSKAILDPVPPYGSKEVIMVFSSLSTTDPGDIKATTNSLKENGIRCSIVGLAAEVYILRQVCKKTGGEYHVATNEEHFHELVNAHVPPPPLASDTLKASLVEMGFPKLKVLKSSKQYFDANVNPKGGRSSGKIGYECPRCKSWLSDVPVECVLCGLTLITSPHLARSYHHLFPIPAF----------------------KEVTATDTSGAARCKGCCKRFLSGDSKAQ--CTSCKNVFCEECDIFIHDSLHNCPGCNS 401          
BLAST of Ggra8504.t1 vs. uniprot
Match: A0A5J4YXZ9 (General transcription factor IIH subunit n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YXZ9_PORPP)

HSP 1 Score: 340 bits (871), Expect = 1.220e-110
Identity = 179/405 (44.20%), Postives = 255/405 (62.96%), Query Frame = 0
Query:   27 YSWESSKIRSWEQIEEDPETGRLKSYQ-IEHQRAKKKTRDDGPSG----VRRGIIRFCVIIIDMSQSLRSTDLKPSRADLVVDSIQSFVKEFFDQNPISQLSLVMTRDGKAVRLSTFSSNEKHHIEAVQKASRLGPGGNASLQNSLIVAKNNLASVPPYGMKEIIISYSSLSTCDPGDIHQTIDSLVSEKIRCSAIGL-GAELYILRCLTKKAGGTYVIARNEEHFRDSWTGHIIPPPTVNRQVNASLIRMGFPMLERL--EQPALYCNNPNLKGRFGYHCPRCSAWISEIPSECALCGLTLVSSPHLARSYHHLFPVPRFVTLEESEQYFLQSNGARSEADTERVTELVNTDAVRCTGC-KTMLRKDKALRLLCPNCLNVFCIDCDSFIHDSLHHCPGCGNQTL 422
            Y+WE++  RSW++I+EDP+TGRL + + I  Q A+K+ RD         VRRG++RF V+ +D S+S+  TD++PSRA++VV + Q FV+EF+DQNPISQL ++ TR+G A  LS   SN   HI+A+  +  +G  G ASLQN L+     L ++P Y  +EI++ + S++TCDPGD+H TI  L  +KI  S + + GAE+Y+L+  + + GG + +  NEEH        + PP      +  SLIRMGFP+L  +  + P   C N  ++ R GY CPRCSAW+S++P EC LCGLTL+SSPHLARSYHHLFPVPRF           +S    +EAD +R           C+ C +++    +++   CP C   FCI+CDSFIH+SLH+CPGC N  +
Sbjct:    6 YAWEANFERSWDKIQEDPQTGRLSASEGIAQQLARKRRRDSLRETLRGKVRRGMMRFMVLALDFSRSMNLTDMRPSRAEVVVGAAQLFVREFYDQNPISQLIIIATRNGVATVLSPLGSNPVAHIKALSDSLAVGTFGEASLQNLLVQGLAILDALPLYASREILVVFGSIATCDPGDVHATIGELREKKITVSIVCVAGAEVYVLKSASHETGGKHFVPMNEEHLHLHMQMFLQPPQVRADTLAPSLIRMGFPVLRTITSDLPPKKCLNDLIERRVGYECPRCSAWLSDVPIECVLCGLTLLSSPHLARSYHHLFPVPRFTE---------KSVSGAAEADQQRA----------CSACLRSLAAGGESVAAECPRCSEEFCIECDSFIHESLHNCPGCENGGI 391          
BLAST of Ggra8504.t1 vs. uniprot
Match: A0A1X6P7L4 (VWFA domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P7L4_PORUM)

HSP 1 Score: 335 bits (860), Expect = 5.770e-110
Identity = 163/323 (50.46%), Postives = 221/323 (68.42%), Query Frame = 0
Query:   14 DKDDEDMKRIREGYSWESSKIRSWEQIEEDPETGRLKSYQIEHQRAKKKTRDDGPSGVRRGIIRFCVIIIDMSQSLRSTDLKPSRADLVVDSIQSFVKEFFDQNPISQLSLVMTRDGKAVRLSTFSSNEKHHIEAVQKASRLGPGGNASLQNSLIVAKNNLASVPPYGMKEIIISYSSLSTCDPGDIHQTIDSLVSEKIRCSAIGLGAELYILRCLTKKAGGTYVIARNEEHFRDSWTGHIIPPPTVNRQVNASLIRMGFPMLERLEQPALYCNNPNLKGR-FGYHCPRCSAWISEIPSECALCGLTLVSSPHLARSYHHLFP 335
            D DD  ++    GY+WE+   RSWEQI+EDP TGRLKS     QRA+K+ RDDG  GVRRG+IR+ V+++D+S ++ +TD  PSR + V  +  +F++ FFD+NPISQL+LV  RDG A  LST +S+ + H +A+  A   G  G+ASL+N + +A   LA +P YG +E+++ +  L+TCDPGD+   +D L ++ +R S +G+ AE+YIL  L+K+ GG Y +A  E HF +   GH+ PPPTV   V  +LIRMGFP+L  L  P   C + NL  R  GY CPRC AWI+ +P+EC LCGLTLVSSPHLARSYHHLFP
Sbjct:    3 DDDDAPVEAASRGYAWEARFERSWEQIQEDPRTGRLKSLAAVTQRARKRRRDDGVRGVRRGMIRYAVLVVDLSAAMAATDWSPSRGEAVASAADTFIRAFFDENPISQLALVALRDGVAELLSTLNSSPRSHCDALATAVAGGCYGDASLENGVRLAAAVLAPIPAYGTREVLVLFGGLATCDPGDVRAAMDGLAADGMRASVVGIDAEVYILSLLSKRTGGMYAVATGEAHFGELLAGHVTPPPTVGDGVPPTLIRMGFPLLRALPAPRP-CFDDNLAARRVGYVCPRCEAWIAHVPAECVLCGLTLVSSPHLARSYHHLFP 324          
BLAST of Ggra8504.t1 vs. uniprot
Match: M2Y5R3 (General transcription factor IIH subunit n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y5R3_GALSU)

HSP 1 Score: 335 bits (859), Expect = 8.700e-109
Identity = 175/403 (43.42%), Postives = 243/403 (60.30%), Query Frame = 0
Query:   27 YSWESSKIRSWEQIEEDPETGRLKSYQ-IEHQRAKKKTRDDGPSGVRRGIIRFCVIIIDMSQSLRSTDLKPSRADLVVDSIQSFVKEFFDQNPISQLSLVMTRDGKAVRLSTFSSNEKHHIEAVQKASRLGPGGNASLQNSLIVAKNNLASVPPYGMKEIIISYSSLSTCDPGDIHQTIDSLVSEKIRCSAIGLGAELYILRCLTKKAGGTYVIARNEEHFRDSWTGHIIPPPTVNRQVNASLIRMGFPMLERLEQPALYCNNPNLKGRFGYHCPRCSAWISEIPSECALCGLTLVSSPHLARSYHHLFPVPRFVTLEESE--QYFLQSNGARSEADTERVTELVNTDAVRCTGCKTMLRKDKALRLLCPNCLNVFCIDCDSFIHDSLHHCPGCGNQTLRNLA 426
            YSWE   +RSWE +EED ETG++K     E  R K+K R +    VRRG+IRF V+I+D+S+  + TD+KPSR ++ +   Q F+  +F++NPISQL++V+ RDG A +LS+  SN + H E V+ A++ G  GN SLQN L VA + L S+P YG +E++I Y+S+S+CDPGDI QTI+ L  E+IRC+ IG+ AELYIL+ L  +  G+Y +  NE H  +     ++P   +      +L+RMGFP L+  ++P +  N+  L+ +  + CPRC     EIP EC LCGL LVSS  LARSYHHLFPV  F  LEE +  Q   Q N                     C  CK     + +   +CPNC N+FC  CD FIHD L++CPGC  +    +A
Sbjct:   13 YSWEQDIVRSWETLEED-ETGKIKDLSSFERSRVKRK-RKNTQQNVRRGLIRFLVLILDLSREAKETDVKPSRGEVCLSCAQKFLYSYFNENPISQLAVVVLRDGVAEKLSSMGSNPRQHSEVVKNANQKGFYGNCSLQNGLDVALSLLHSIPSYGSREVLILYNSISSCDPGDIRQTIEKLEKERIRCNVIGMAAELYILKYLAARTHGSYFVCMNESHLLELLEDFVVPSALIENNTKTALVRMGFPTLKAYKEPKVCLNDKVLRNQV-FVCPRCECCYGEIPIECVLCGLILVSSSQLARSYHHLFPVANFHELEEDKYKQSHFQPN--------------------YCFACKGTFPFEGSEYFVCPNCQNIFCGICDIFIHDGLNNCPGCEIRPENRIA 392          
BLAST of Ggra8504.t1 vs. uniprot
Match: D7FRP7 (General transcription factor IIH subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRP7_ECTSI)

HSP 1 Score: 327 bits (839), Expect = 1.400e-105
Identity = 174/404 (43.07%), Postives = 244/404 (60.40%), Query Frame = 0
Query:   26 GYSWESSKIRSWEQIEEDPETGRLKSYQIEHQRAKKKTRDDGPSGVRRGIIRFCVIIIDMSQSLRSTDLKPSRADLVVDSIQSFVKEFFDQNPISQLSLVMTRDGKAVRLSTFSSNEKHHIEAVQKASRLGPGGNASLQNSLIVAKNNLASVPPYGMKEIIISYSSLSTCDPGDIHQTIDSLVSEKIRCSAIGLGAELYILRCLTKKAGGTYVIARNEEHFRDSWTGHIIPPPTVNRQVNA---SLIRMGFPMLERLEQPAL-YCNNPNLKGRFGYHCPRCSAWISEIPSECALCGLTLVSSPHLARSYHHLFPVPRFVTLEESEQYFLQSNGARSEADTER-------VTELVNTDAVRCTGCKTMLRKDKAL-RLLCPNCLNVFCIDCDSFIHDSLHHCPGC 417
            GY+WE    R+WE +EED E G +K+ +   +R ++  R  G   ++RG+IR+  + ID+S+++   D++PSR  + +  +Q FV  +FDQNP+SQL +++TR+G+A +++  S N K H+EA+ K S     G ASLQN L +A  +L +VP YG +E+++ YSSLSTCDPGDIH+TI  L + K+R S +GLGAE+++LR LT++  G Y IA +E H+R+S      PPPT   +  A    L+RMGFP   +   P+L Y  N       GY CPRC    SE+PSEC +C L LVSSPHLARSYHHLFPVP+F  +  +                          TE  +  +  C GC   LR    L R  CP C + FC+DCD ++HDSLH+CPGC
Sbjct:   14 GYAWEKGFERTWEGVEED-EHGNIKTREEGQRRNRRVRRRVGGESIKRGMIRYLYLAIDLSKTMADGDMRPSRLAVTLRIVQDFVTNYFDQNPLSQLGILVTREGRAEKITELSGNPKAHMEALTKDS--DTKGEASLQNLLEMACTSLRAVPEYGNREVVVIYSSLSTCDPGDIHETIAKLKTHKVRASVVGLGAEMFVLRRLTEETSGDYSIAGDENHYRESLMAQCTPPPTPPGREGAMFADLVRMGFPAETQDVFPSLGYSGNRQELSVSGYSCPRCKTKTSELPSECVICALPLVSSPHLARSYHHLFPVPQFDEIPAAAPXXXXXXXXXXXXXXXXXXXXXXXATEEESASSSYCAGC---LRDLSGLPRYRCPECRSAFCLDCDMYVHDSLHNCPGC 411          
BLAST of Ggra8504.t1 vs. uniprot
Match: A0A835ZF22 (General transcription factor IIH subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF22_9STRA)

HSP 1 Score: 315 bits (806), Expect = 7.630e-101
Identity = 167/398 (41.96%), Postives = 232/398 (58.29%), Query Frame = 0
Query:   26 GYSWESSKIRSWEQIEEDPETGRLKSYQIEHQRAKKKTRDDGPS----GVRRGIIRFCVIIIDMSQSLRSTDLKPSRADLVVDSIQSFVKEFFDQNPISQLSLVMTRDGKAVRLSTFSSNEKHHIEAVQKASRLGPGGNASLQNSLIVAKNNLASVPPYGMKEIIISYSSLSTCDPGDIHQTIDSLVSEKIRCSAIGLGAELYILRCLTKKAGGTYVIARNEEHFRDSWTGHIIPPPTVNRQVN--ASLIRMGFPMLERLEQPALYCNNPNLKGRFGYHCPRCSAWISEIPSECALCGLTLVSSPHLARSYHHLFPVPRFVTLEESEQYFLQSNGARSEADTERVTELVNTDAVRCTGCKTMLRKDKALRLLCPNCLNVFCIDCDSFIHDSLHHCPGC 417
            GY+WE S  RSWE ++ED E G LK+   +H+R  + +R    +     ++RG+IR+  + ID+S+ +  TD++P+R  +    +  FV+ FFDQNP+SQL +++TRDG+A R++  S N K HIEA+ ++  L   G  SLQN L +  + LAS P YG +E ++ Y SL TCDPG+I  TI  L   K+RCS +GLGAE+YI R + +  GG +V+A +E H++DS      PPPT+ ++    A L+ MGFP          Y          GY+CPRC    +E+PS C +C L LVSSPHLARSYHHLFPVP F                    D +  +   +T A  C  C       KA R +CPNC   FC++CD +IHDSLH+CPGC
Sbjct:   24 GYAWEKSFERSWEDVQED-EQGNLKT---DHERDARLSRGRRTALYGQAIKRGMIRYVFLCIDLSKGMSETDMRPNRLAVTTKVVAEFVRGFFDQNPLSQLGIIITRDGRAERVTDLSGNPKAHIEALARS--LDTQGEPSLQNLLELTAHCLASAPEYGSREAVVLYGSLHTCDPGNILDTIALLKRHKVRCSVVGLGAEVYIARRIAEDTGGDFVVAVDEHHYKDSLLAQCTPPPTLAKRGPHFADLVEMGFPRRVDGTFALGYSGRQQTLTAQGYYCPRCKIKTTELPSTCEICALPLVSSPHLARSYHHLFPVPPF--------------------DEQEASAAADTAAQSCEACLRPFAA-KASRFMCPNCKGAFCLECDMYIHDSLHNCPGC 394          
BLAST of Ggra8504.t1 vs. uniprot
Match: A0A1X2GE48 (General transcription and DNA repair factor IIH n=1 Tax=Hesseltinella vesiculosa TaxID=101127 RepID=A0A1X2GE48_9FUNG)

HSP 1 Score: 313 bits (801), Expect = 4.740e-100
Identity = 166/395 (42.03%), Postives = 228/395 (57.72%), Query Frame = 0
Query:   26 GYSWESSKIRSWEQIEEDPETGRLKSY--QIEHQRAKKKTRDDGPSGVRRGIIRFCVIIIDMSQSLRSTDLKPSRADLVVDSIQSFVKEFFDQNPISQLSLVMTRDGKAVRLSTFSSNEKHHIEAVQKASRLGPGGNASLQNSLIVAKNNLASVPPYGMKEIIISYSSLSTCDPGDIHQTIDSLVSEKIRCSAIGLGAELYILRCLTKKAGGTYVIARNEEHFRDSWTGHIIPPPTVNRQVNASLIRMGFPMLERLEQPALYCNNPNLKGRFGYHCPRCSAWISEIPSECALCGLTLVSSPHLARSYHHLFPVPRFVTLEESEQYFLQSNGARSEADTERVTELVNTDAVRCTGCKTMLRK-DKALRLLCPNCLNVFCIDCDSFIHDSLHHCPGC 417
            GYSWE    RSW+ ++ED E GRL S   Q++ QR +++   D    ++RGIIR   +++D+S+++   DL+PSR +L +   Q F+ EFFDQNPISQL +++T DG A +L+  S N   H  A+Q  S +   G  SLQN+L +A+ ++  VP +G KEII+ + SL+TCDPGDIH+TIDSL  E +R S +GL AE+ I + ++    G+Y +  NE HF+D     + PPP    +  ASL+ MGFP        +L   +  L    GY CPRC + + E+PS+C +CGLTLVSSPHLARSYHHLFPV  F  + +                              C  C     K D A +  CP C   FC DCD FIH+ LH+CPGC
Sbjct:   29 GYSWEEEYKRSWDVLQEDAE-GRLSSVVAQLQQQRKRRRHLKD-TDVIQRGIIRHVFLVVDLSEAMNDKDLRPSRIELTIMYAQQFITEFFDQNPISQLGIIVTHDGIAEKLTELSGNPSDHTRALQNKSNIETSGEPSLQNALQLARASMVGVPNHGSKEIIMVFGSLTTCDPGDIHETIDSLQREMVRVSIVGLAAEVQICKVISHATKGSYGVILNEAHFKDLLFEAVPPPPVAPNKSTASLVTMGFPKRLMEHHTSLCVCHAKLTSG-GYICPRCKSKVCELPSDCDICGLTLVSSPHLARSYHHLFPVDNFDEIRQPGH------------------------TTHCYSCLAYFDKNDLAGQFTCPKCKKEFCADCDLFIHEVLHNCPGC 396          
BLAST of Ggra8504.t1 vs. uniprot
Match: D3AXK7 (General transcription factor IIH subunit n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3AXK7_POLPP)

HSP 1 Score: 314 bits (804), Expect = 5.790e-100
Identity = 172/398 (43.22%), Postives = 242/398 (60.80%), Query Frame = 0
Query:   27 YSWESSKIRSWEQIEEDPETGRLKSYQIEHQRAKKKTRDDGPSGVRRGIIRFCVIIIDMSQSLRSTDLKPSRADLVVDSIQSFVKEFFDQNPISQLSLVMTRDGKAVRLSTFSSNEKHHIEAVQKASRLGPGGNASLQNSLIVAKNNLASVPPYGMKEIIISYSSLSTCDPGDIHQTIDSLVSEKIRCSAIGLGAELYILRCLTKKAGGTYVIARNEEHFRDSWTGHIIPPPTVNRQVNASLIRMGFPMLERLEQPALYCNNPNLKGRFGYHCPRCSAWISEIPSECALCGLTLVSSPHLARSYHHLFPVPRFVTLEESEQYFLQSNGARSEADTERVTELVNTDAVRCTGCKTMLRKDKALRLLCPNCLNVFCIDCDSFIHDSLHHCPGCGNQTLRN 424
            Y WES   R+W+ IEED E+G   S Q E     ++ R D    VRRG+ R   +I+D+S++L S D+KPSR   +++S +SF+KEFFDQNPISQ+SL++T++ KA +L+  + N   HI A++  S +   G+ S+QNSL VA + L+ VP YG +EII+ YSSL+TCDPGD+ +TI+ L +E+IR S I + AEL+I + ++++  GT  +  NEEHF +    H  PPPT  +   A+L+ MGFP       P +   +  L+   GY CPRCS+   E+P++C +C L+LVSSPHLARSYHHLF VP F  +   E                     + T+ + C GC T+  K  +L   CP C   FC +CD FIH+SLH+CPGC N    N
Sbjct:   45 YKWESQFERTWDDIEED-ESGLRPSLQEERIMRTRRQRIDAQR-VRRGMQRHICLIVDLSKTLASQDMKPSRHQCLLNSSESFIKEFFDQNPISQISLIVTKNSKAEKLTELNGNPNRHITALKNTSAME--GDPSIQNSLEVAISTLSHVPKYGSREIIVIYSSLTTCDPGDLTKTIEILKNEQIRVSFIHMAAELFICKHISEQTHGTMKVVLNEEHFNECLMLHCQPPPTFGK-TEAALVEMGFPQQHTSSIPMMCMCHEQLR-YVGYTCPRCSSKFCELPTDCQICNLSLVSSPHLARSYHHLFQVPLFTEINWRE---------------------LKTE-ISCFGCLTV-PKSSSLFFGCPRCKQSFCFECDQFIHESLHNCPGCENNLNTN 413          
The following BLAST results are available for this feature:
BLAST of Ggra8504.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3ITA67.220e-26079.48General transcription factor IIH subunit n=1 Tax=G... [more]
R7Q7Q85.270e-20566.50General transcription factor IIH subunit n=1 Tax=C... [more]
A0A7S3EFP81.490e-11144.66General transcription factor IIH subunit n=3 Tax=R... [more]
A0A5J4YXZ91.220e-11044.20General transcription factor IIH subunit n=1 Tax=P... [more]
A0A1X6P7L45.770e-11050.46VWFA domain-containing protein n=1 Tax=Porphyra um... [more]
M2Y5R38.700e-10943.42General transcription factor IIH subunit n=2 Tax=G... [more]
D7FRP71.400e-10543.07General transcription factor IIH subunit n=2 Tax=E... [more]
A0A835ZF227.630e-10141.96General transcription factor IIH subunit n=1 Tax=T... [more]
A0A1X2GE484.740e-10042.03General transcription and DNA repair factor IIH n=... [more]
D3AXK75.790e-10043.22General transcription factor IIH subunit n=1 Tax=P... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004595TFIIH C1-like domainSMARTSM01047C1_4_2coord: 374..419
e-value: 5.6E-14
score: 62.4
IPR004595TFIIH C1-like domainPFAMPF07975C1_4coord: 386..418
e-value: 8.6E-11
score: 41.9
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 76..252
e-value: 5.0E-6
score: 36.0
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 78..220
score: 10.182423
IPR007198Ssl1-likePFAMPF04056Ssl1coord: 82..274
e-value: 2.3E-66
score: 223.3
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 72..259
e-value: 1.3E-64
score: 219.2
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 80..242
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 334..424
e-value: 1.6E-14
score: 55.6
IPR012170TFIIH subunit Ssl1/p44PIRSFPIRSF015919TFIIH_SSL1coord: 2..420
e-value: 5.3E-127
score: 422.1
IPR012170TFIIH subunit Ssl1/p44TIGRFAMTIGR00622TIGR00622coord: 296..418
e-value: 6.5E-26
score: 89.2
NoneNo IPR availablePANTHERPTHR12695GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2coord: 19..417
NoneNo IPR availableSUPERFAMILY57889Cysteine-rich domaincoord: 331..417

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:912361..913644 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8504.t1Ggra8504.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 912361..913644 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8504.t1 ID=Ggra8504.t1|Name=Ggra8504.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=428bp
MASRSRGRVLADVDKDDEDMKRIREGYSWESSKIRSWEQIEEDPETGRLK
SYQIEHQRAKKKTRDDGPSGVRRGIIRFCVIIIDMSQSLRSTDLKPSRAD
LVVDSIQSFVKEFFDQNPISQLSLVMTRDGKAVRLSTFSSNEKHHIEAVQ
KASRLGPGGNASLQNSLIVAKNNLASVPPYGMKEIIISYSSLSTCDPGDI
HQTIDSLVSEKIRCSAIGLGAELYILRCLTKKAGGTYVIARNEEHFRDSW
TGHIIPPPTVNRQVNASLIRMGFPMLERLEQPALYCNNPNLKGRFGYHCP
RCSAWISEIPSECALCGLTLVSSPHLARSYHHLFPVPRFVTLEESEQYFL
QSNGARSEADTERVTELVNTDAVRCTGCKTMLRKDKALRLLCPNCLNVFC
IDCDSFIHDSLHHCPGCGNQTLRNLAH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004595TFIIH_C1-like_dom
IPR002035VWF_A
IPR007198Ssl1-like
IPR036465vWFA_dom_sf
IPR013083Znf_RING/FYVE/PHD
IPR012170TFIIH_SSL1/p44