Ggra849.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra849.t1
Unique NameGgra849.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length756
Homology
BLAST of Ggra849.t1 vs. uniprot
Match: A0A2V3IZX8 (RNA helicase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZX8_9FLOR)

HSP 1 Score: 917 bits (2370), Expect = 0.000e+0
Identity = 499/675 (73.93%), Postives = 551/675 (81.63%), Query Frame = 0
Query:    1 MVAVRTAFTPALPLRLTPFTAASRLTCPTTVLRPRYVRSCVVAPSLDSQSKAVAQGAA-------------AAEPLTVLDGALPSPIQSSLEPLQTDAPSDAAADYSA----PEETSNARPTMSSFRLSHSTVERLAENGIIHPTEVQTGTFDNLYDGKDLIAKSRTGTGKTLAFALPILERLAILKSERQYDSRQGPACIVLAPTRELAKQVGREMSYIGGGLNISVECFYGGSAYGPQEGALRRGIDVVVGTPGRVMDHLDRGNLRLSNIAFAVLDEADEMLSMGFSQDVETIFETLPSKEERQVILFSATVPPWVKSLASQFQKDDVIMFDAITSGTMASTTVRHCAVRVPEREEARASLLADIIAVHSPTKDENLEANGVRTPSRVIVFTQTKREADDLATSGALDGCGAAVLHGDVSQKQREVTLSQFRNGQFQVLVATDVAARGLDISGVDVVVQYRVPHDSESYIHRAGRTGXXXXXGTAVVMYSDREARNLRGLERDCKIKFDMEVAPAPEAALEAAVDVAISNISTVDERVLRHLIPRAAEIAKKGEESTETIAAILAIACRRVRLEDRSVLSGEKGMRTLHITSETRQPLNPGAALRIIKELSRDANLDGHVGLIRMCQDGSVVLDVRSEGADELLSTGDRVMADTGLSLALCTGVPVLRDNERR 658
            M A R AFTP+LPLR+  FT   RLTCP +VLRP +VRSC VAP+L S S  VA                 A +PL  LD  L +  Q             AAA+Y+A    P+  +  +PTM    LS  T+ERL  NGI HPTEVQ GTFD LYDGKD+IAKSRTGTGKTLAFALPILERLAILK E  YDSR+GPACIVLAPTRELAKQV REM+YIG GL ISVEC YGGS+Y PQE ALR+G+DVVVGTPGR+MDHLDRGNLRL+N+AFAVLDEADEMLSMGFS DVETIFETLPS EERQVILFSATVPPWVK LASQFQK DV +FDAITSGTMASTTVRHCAVRVPEREEARASLLADIIAVHSPTK  N E    +TPSRVIVFTQTKREADDLATSGALDGCGAAVLHGDVSQ+QRE+TLSQFRNG+FQVLVATDVAARGLDISGVDVVVQYRVP DSESYIHRAGRTGXXXX GTAVV+YSDRE+RNL+ LERDCKI+FDMEVAPAPE ALEAAVDVA++N+ +V++RVL+HLIPRAAEI K GE+STE IAAILAIA RRVRLEDRSVLSGEKGMRT+H+ S     L PG ALR+IKEL+R   +DG+VGLIR CQDGSVVLDV SEG D+LL  G+ +M  TGL + LC+GVP+LRD+ RR
Sbjct:    4 MAAARPAFTPSLPLRVGLFTP--RLTCPISVLRPSHVRSCAVAPTLSSSSNGVAXXXXXXXXXXXXXXXXXAVQPLPALDDMLTTSSQHQ----------PAAAEYTASEPVPKSQTPTKPTMHDLTLSPVTIERLQRNGITHPTEVQVGTFDTLYDGKDVIAKSRTGTGKTLAFALPILERLAILKGEGNYDSRRGPACIVLAPTRELAKQVSREMAYIGAGLKISVECVYGGSSYTPQENALRKGVDVVVGTPGRIMDHLDRGNLRLANVAFAVLDEADEMLSMGFSTDVETIFETLPSPEERQVILFSATVPPWVKRLASQFQKKDVTVFDAITSGTMASTTVRHCAVRVPEREEARASLLADIIAVHSPTKT-NGEDGVKQTPSRVIVFTQTKREADDLATSGALDGCGAAVLHGDVSQRQREITLSQFRNGKFQVLVATDVAARGLDISGVDVVVQYRVPLDSESYIHRAGRTGXXXXSGTAVVLYSDRESRNLKTLERDCKIRFDMEVAPAPETALEAAVDVALANVGSVEDRVLKHLIPRAAEIVKGGEDSTEIIAAILAIASRRVRLEDRSVLSGEKGMRTVHVKSSEGVRLGPGTALRLIKELARHCKVDGNVGLIRTCQDGSVVLDVSSEGVDKLLEAGEGMMESTGLRVHLCSGVPMLRDDRRR 665          
BLAST of Ggra849.t1 vs. uniprot
Match: R7QI04 (RNA helicase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI04_CHOCR)

HSP 1 Score: 755 bits (1950), Expect = 1.140e-264
Identity = 397/558 (71.15%), Postives = 466/558 (83.51%), Query Frame = 0
Query:  104 PTMSSFRLSHSTVERLAENGIIHPTEVQTGTFDNLYDGKDLIAKSRTGTGKTLAFALPILERLAILKSER--QYDSRQGPACIVLAPTRELAKQVGREMSYIGGGLNISVECFYGGSAYGPQEGALRRGIDVVVGTPGRVMDHLDRGNLRLSNIAFAVLDEADEMLSMGFSQDVETIFETLPSKEERQVILFSATVPPWVKSLASQFQKDDVIMFDAITSGTMASTTVRHCAVRVPEREEARASLLADIIAVHSPTKDENLEANGVRTPSRVIVFTQTKREADDLATSGALDGCGAAVLHGDVSQKQREVTLSQFRNGQFQVLVATDVAARGLDISGVDVVVQYRVPHDSESYIHRAGRTGXXXXXGTAVVMYSDREARNLRGLERDCKIKFDMEVAPAPEAALEAAVDVAISNISTVDERVLRHLIPRAAEIAKKGEEST-ETIAAILAIACRRVRLEDRSVLSGEKGMRTLHITSETRQPLNPGAALRIIKELSRDANLDGHVGLIRMCQDGSVVLDVRSEGADELLSTGDRVMADTGLSLALCTGVPVLRDNERR 658
            P + SFRLS  T++ L +N I H TEVQ GTFD L++GKD+IAKSRTGTGKTLAF LPI+ERLAI++ ER       +GP CIVLAPTRELAKQV REMS++G GL +SVECFYGG  YGPQE ALRRG+DVVVGTPGR+MDHL++GNLRL NI+FAVLDEADEMLSMGF+QDVETIFETLP + ERQVILFSATVP WVK+LASQFQK DV+ FDA+TSG+MASTTVRHCAVRVPER+EARA LLAD+IAVHS  + E+    G   PSR IVFT+TKREAD+LATSG+LDGCGAAVLHGDVSQKQREVTLSQFR GQFQVLVATDVAARGLDISGVDVV+QYRVP+D+ESYIHRAGRT XXXXX TAVVMYSDRE+RNLR LER+C+I+FDMEVAPAPE ALEAAV+VA+ NIS VDERV++HL+PRA E+   G E T E +AAILAIA RR RLEDRS+LSGEKGMRT+ ++ E  + ++PG A+R I +L+R A  +  VGLIRMC+DGS V+DV S+ A  L+   +++  D  + L + +GVP L++ ERR
Sbjct:    3 PPLESFRLSPRTIQMLKKNDITHTTEVQAGTFDLLFEGKDIIAKSRTGTGKTLAFGLPIMERLAIIRKERGGPKPRGEGPGCIVLAPTRELAKQVSREMSHLGQGLGLSVECFYGGVGYGPQENALRRGVDVVVGTPGRIMDHLNKGNLRLDNISFAVLDEADEMLSMGFAQDVETIFETLPPENERQVILFSATVPRWVKNLASQFQKKDVVTFDAVTSGSMASTTVRHCAVRVPERDEARAGLLADVIAVHSQGRCEDTIKRG---PSRAIVFTETKREADELATSGSLDGCGAAVLHGDVSQKQREVTLSQFRQGQFQVLVATDVAARGLDISGVDVVIQYRVPNDAESYIHRAGRTXXXXXXXTAVVMYSDRESRNLRNLERECRIRFDMEVAPAPETALEAAVNVALDNISGVDERVIKHLLPRAEEMLASGAEDTAEKLAAILAIAGRRTRLEDRSILSGEKGMRTVVVSGE--REISPGLAMRFISDLARAAETESRVGLIRMCRDGSAVVDVISDAALGLVGASEKLGEDAEIKLRVASGVPQLKEIERR 555          
BLAST of Ggra849.t1 vs. uniprot
Match: A0A1X6NKY3 (RNA helicase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKY3_PORUM)

HSP 1 Score: 571 bits (1471), Expect = 6.730e-193
Identity = 314/536 (58.58%), Postives = 383/536 (71.46%), Query Frame = 0
Query:  128 TEVQTGTFDNLYDGKDLIAKSRTGTGKTLAFALPILERLAILKSERQYDSR-QGPACIVLAPTRELAKQVGREMSYIGGGLNISVECFYGGSAYGPQEGALRRGIDVVVGTPGRVMDHLDRGNLRLSNIAFAVLDEADEMLSMGFSQDVETIFET--LPSKEERQVILFSATVPPWVKSLASQFQKDDVIMFDAITSGTMASTTVRHCAVRVPEREEARASLLADIIAVHSPTKDENLEANGVRTPSRVIVFTQTKREADDLATSGALDGCGAAVLHGDVSQKQREVTLSQFRNGQFQVLVATDVAARGLDISGVDVVVQYRVPHDSESYIHRAGRTGXXXXXGTAVVMYSDREARNLRGLERDCKIKFDMEVAPAPEAALEAAVDVAISNISTVDERVLRHLIPRAAEIAKKGEESTETIAAILAIACRRVRLEDRSVLSGEKGMRTLHITSETRQPLNPGAALRIIKELSRDANLDGHVGLIRMCQDG-SVVLDVRSEGADELLSTGDRVMA--DTGLSLALCTGVPVLRDNER 657
            TEVQ GTFD LY+GKD+IA+SRTGTGKTLAF LP+LERLA  K+  +  SR + P  +VLAPTRELAKQV REM+  G  L +SVECFYGGSAYGPQEGALRRG+D+VVGTPGR+MD LDR  L LS + FAVLDEADEMLSMGF+ DVE +F +  LP +EERQ++LFSATVP WVK LASQ QK DV+ FD+I  G M +TTV+H AV+VPERE ARA LLADI+AV+          NGV    R IVF +TKRE D+LATSGAL+GCGAAVLHGDV+QKQRE+TL+QFR+G+F VLVATDVAARGLDI+ V+VVVQYRVP D+E+Y+HRAGRTG     G AVVMYSDR+  +LR LERDC IKF+   +PAPE ALEAA   A + +  VD  V++HL+P A  +    ++     AA LA+A RR R+ +RS+LSGE  M+TL +       L+P  ALR +  L+  A  D  VG+IR+  DG S V+DV+ + A  + +         D  L   L   +P L D  R
Sbjct:    2 TEVQAGTFDTLYEGKDMIARSRTGTGKTLAFTLPLLERLAAYKAANRGASRSRAPLALVLAPTRELAKQVSREMALTGAPLRVSVECFYGGSAYGPQEGALRRGVDIVVGTPGRLMDLLDRRILDLSAVRFAVLDEADEMLSMGFADDVEHLFSSFVLP-REERQIVLFSATVPSWVKRLASQHQKSDVVSFDSIGRGDMTATTVKHYAVKVPERESARAGLLADILAVYG---------NGVGG-GRAIVFAETKRECDELATSGALEGCGAAVLHGDVTQKQREMTLAQFRSGRFAVLVATDVAARGLDINNVEVVVQYRVPSDAEAYVHRAGRTGRAGASGVAVVMYSDRDGGSLRRLERDCGIKFERAGSPAPEVALEAAATAAAAALHGVDAAVVKHLLPTAKGLMDSVDDPAAAFAACLAVAGRRTRMVERSLLSGESDMKTLLVAGGRGGALSPAMALRYVAGLAEAAGQDATVGMIRVAADGRSAVVDVKPDAARAVAAASAEASTEGDNDLVATLAVKLPPLNDERR 526          
BLAST of Ggra849.t1 vs. uniprot
Match: A0A1X6NYZ2 (RNA helicase n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYZ2_PORUM)

HSP 1 Score: 573 bits (1476), Expect = 7.270e-191
Identity = 320/583 (54.89%), Postives = 408/583 (69.98%), Query Frame = 0
Query:   82 QTDAPSDAAADYSAPEETSNARPT-MSSFRLSHSTVERLAENGIIHPTEVQTGTFDNLYDGKDLIAKSRTGTGKTLAFALPILERLAILKSERQ-----YDSRQGPACIVLAPTRELAKQVGREMSYIGGGLNISVECFYGGSAYGPQEGALRRGIDVVVGTPGRVMDHLDRGNLRLSNIAFAVLDEADEMLSMGFSQDVETIFETLPSKE-ERQVILFSATVPPWVKSLASQFQKDDVIMFDAITSGTMASTTVRHCAVRVPEREEARASLLADIIAVHSPTKDENLEANGVRTPSRVIVFTQTKREADDLATSGALDGCGAAVLHGDVSQKQREVTLSQFRNGQFQVLVATDVAARGLDISGVDVVVQYRVPHDSESYIHRAGRTGXXXXXGTAVVMYSDREARNLRGLERDCKIKFDMEVAPAPEAALEAAVDVAISNISTVDERVLRHLIPRAAEIAKKGEESTETIAAILAIACRRVRLEDRSVLSGEKGMRTLHITSETRQPLNPGAALRIIKELSRDANLDGH--VGLIRMCQDG-SVVLDVRSEGADELLSTGDRVMADTGLSLALCTGVPVLRD 654
            +T A +DA  + + P+++++ +P  +SS+R++ + V+ LA  GI H T+VQ GTFD LY+G+D+IA+SRTGTGKTLAFALPILERLA  K+        Y       C+VLAPTRELA QV REM+  G  L ISVECFYGG++YG Q  ALRRG+DVVVGTPGRVMD +DRG++ LS++ FAVLDEADEMLSMGF++DVE +F      E ERQ +LFSATVP WVK LASQ QK DVI +D++  G M +  VRH AVRVP+R+  RASLLAD++AV+          +G     R IVFT+TKRE D+LA SGAL+GCGAAVLHGDVSQKQREVTL+QFR+G+F VLVATDVAARGLDISGV+VVVQYR+P D+E+Y+HRAGRTG     G +VV++SDREA  LR LERD  +KF+   APAPEAAL+AA     + +  VD  V+ HL+P A E+  + +      AA +A+A RR +LE RSVLSGE G R L ++     PL P   +R +  L+R   +D    VG+IR+C DG S V+D  +  AD L     +  +D  LSL L T +P L++
Sbjct:  126 ETVAVTDADVEAATPDQSADEKPNALSSYRITPAVVDNLANRGITHMTDVQAGTFDLLYEGRDMIARSRTGTGKTLAFALPILERLAASKAADGSAGGGYRRGAKTRCLVLAPTRELANQVAREMTLTGKPLRISVECFYGGASYGAQVSALRRGVDVVVGTPGRVMDLMDRGDMDLSDVEFAVLDEADEMLSMGFAEDVERVFGAFSRTEMERQTVLFSATVPSWVKKLASQHQKRDVITYDSVGKGDMTAVNVRHVAVRVPDRDSTRASLLADVLAVYG-------SGHG---GGRAIVFTETKRECDELAASGALEGCGAAVLHGDVSQKQREVTLAQFRSGRFAVLVATDVAARGLDISGVEVVVQYRLPSDTEAYVHRAGRTGRAGASGVSVVLHSDREAGGLRRLERDVGLKFERTSAPAPEAALDAAAMHVSAAMKDVDAAVVAHLLPTAKEVLAQYKHPIAAFAACMALAGRRTKLEYRSVLSGESGKRALLVSGTI--PLTPAVVVRFVSRLARKIGVDDELEVGMIRVCADGRSAVVDTGAAAADALAKAAVKHNSDE-LSLKLATELPPLQE 695          
BLAST of Ggra849.t1 vs. uniprot
Match: A0A7S1TKV5 (RNA helicase (Fragment) n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TKV5_9RHOD)

HSP 1 Score: 496 bits (1277), Expect = 3.340e-162
Identity = 284/532 (53.38%), Postives = 370/532 (69.55%), Query Frame = 0
Query:  107 SSFRLSHSTVERLAENGIIHPTEVQTGTFDNLYDGKDLIAKSRTGTGKTLAFALPILERLAILKSERQYD------SRQGPACIVLAPTRELAKQVGREMSYIGGGLNISVECFYGGSAYGPQEGALRRGIDVVVGTPGRVMDHLDRGNLRLSNIAFAVLDEADEMLSMGFSQDVETIFETLPSKEERQVILFSATVPPWVKSLASQFQKDDVIMFDAITSG-TMASTTVRHCAVRVPEREEARASLLADIIAVHSPTKDENLEANGVRTPSRVIVFTQTKREADDLATSGALDGCGAAVLHGDVSQKQREVTLSQFRNGQFQVLVATDVAARGLDISGVDVVVQYRVPHDSESYIHRAGRTGXXXXXGTAVVMYSDREARNLRGLERDCKIKFDMEVAPAPEAALEAAVDVAISNISTVDERVLRHLIPRAAEIAKKGEESTETIAAILAIACRRVRLEDRSVLSGEKGMRTLHITSETRQPLNPGAALRIIKELSRDANLDGHVGLIRMCQDGSV-VLDVRSEGADELLS 630
            S++R+S  TVE L + GI   T+VQ GT+D+LYDG+D+IA+SRTGTGKTLAFA+PILERL  +K  ++        S +GP+CI+LAPTRELA QV RE+  +     +  ECFYGGS+Y  QE AL+RGID +V TPGR++DHL R N+    + F VLDEADEMLSMGF+++V+ + ++LP KE RQ ILFSATVP WVK++A Q Q+D V MFDA+  G +MA+TTVRHCAV  P   E RA+ L D+I V+           G  +  R IVFTQTKREAD+LATSG L   GAAVLHGDV+Q QRE TL+QFR G+FQVLVATDVAARGLDI+GVD+VVQ+RVP D+ESY+HRAGRTGXXXXXGTAV+MYS  E R+LR L  D  +KF+    P+ E  L  A + A S+I  VD +V  +   RAAE    GE   + +AA LA+  RR  + +RS+L+G+   +TL I  + R+PL  G+ +R++ +L+    L   VG + +C D ++ V D+  E A+ LL+
Sbjct:  126 SAYRISPLTVELLHKKGIETMTDVQYGTYDHLYDGRDIIARSRTGTGKTLAFAVPILERLVAMKGSKEDKHGVGARSGRGPSCIILAPTRELALQVSREIDSLAKPHGLETECFYGGSSYNVQERALQRGIDFLVATPGRLIDHLQRNNIDCGGVRFFVLDEADEMLSMGFAENVDQVLDSLPPKEARQTILFSATVPSWVKNIARQHQRDPV-MFDAVGEGVSMAATTVRHCAVLTPRDFEPRAAFLDDVITVYG----------GGFSAGRAIVFTQTKREADELATSGVLKS-GAAVLHGDVTQSQRETTLAQFRAGRFQVLVATDVAARGLDITGVDLVVQFRVPLDTESYVHRAGRTGXXXXXGTAVIMYSQDEMRSLRKLAMDTGVKFERHGLPSIEKVLTIAAEHAKSSIDDVDSKVSAYFA-RAAEELLAGENVRDRVAAALALISRRREIVERSILTGQADYKTLLI--KAREPLTVGSVVRLVSQLAEKLGLTISVGRVSLCADNTMAVFDLTLEEAEALLN 642          
BLAST of Ggra849.t1 vs. uniprot
Match: A0A5J4YW05 (RNA helicase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YW05_PORPP)

HSP 1 Score: 497 bits (1279), Expect = 5.870e-162
Identity = 283/530 (53.40%), Postives = 364/530 (68.68%), Query Frame = 0
Query:  109 FRLSHSTVERLAENGIIHPTEVQTGTFDNLYDGKDLIAKSRTGTGKTLAFALPILERLAILKSERQYDSR------QGPACIVLAPTRELAKQVGREMSYIGGGLNISVECFYGGSAYGPQEGALRRGIDVVVGTPGRVMDHLDRGNLRLSNIAFAVLDEADEMLSMGFSQDVETIFETLPSKEERQVILFSATVPPWVKSLASQFQKDDVIMFDAITSG-TMASTTVRHCAVRVPEREEARASLLADIIAVHSPTKDENLEANGVRTPSRVIVFTQTKREADDLATSGALDGCGAAVLHGDVSQKQREVTLSQFRNGQFQVLVATDVAARGLDISGVDVVVQYRVPHDSESYIHRAGRTGXXXXXGTAVVMYSDREARNLRGLERDCKIKFDMEVAPAPEAALEAAVDVAISNISTVDERVLRHLIPRAAEIAKKGEESTETIAAILAIACRRVRLEDRSVLSGEKGMRTLHITSETRQPLNPGAALRIIKELSRDANLDGHVGLIRMCQDGSV-VLDVRSEGADELLS 630
            +R+S   V +L E  I   TEVQ GTFD++YDG+D+IA+SRTGTGKTLAF LPI+E+LA +    +  +       +GPAC++LAPTRELA QV RE+  I     +S ECFYGGS YG QE ALRRGID++VGTPGR +DHL+RG+L++  + F VLDEADEMLSMGF++DV+ + + LP KE+RQ ILFSATVP WVK +A + QK+ V MFDAI  G + A+TTVRHCAV+VP   EARA+ L DI+ V            G     R IVFTQTKREAD+LATSGAL   GAAVLHGDV+QKQRE TL QFR G+F VLVATDVAARGLDISGVD+VVQ+RVP D+ESY+HR+GRTGXXXX GTAV+MYS  E R LR L  D  +KF+    P+ E  L    D+A ++I  VD +V+ +   +A E+    E + + +A  LA+  RR  + +RS+L+G+   +T+ I  + R+PL     LR +  L+    L   +G + +CQD ++ V D+  E AD LLS
Sbjct:  158 YRVSPKVVAKLTEKNIFEMTEVQYGTFDSVYDGRDMIARSRTGTGKTLAFGLPIIEKLASIMGTDEDTTGIGRTPGRGPACVILAPTRELASQVARELDDIARIHGMSTECFYGGSPYGAQESALRRGIDILVGTPGRTIDHLNRGSLKMDTVRFMVLDEADEMLSMGFAEDVDVMMDFLPPKEQRQTILFSATVPSWVKKIADKHQKNPV-MFDAIGRGESSAATTVRHCAVQVPRDFEARAAFLDDIVTVFG----------GGFGGGRAIVFTQTKREADELATSGALKA-GAAVLHGDVTQKQRENTLQQFRQGRFAVLVATDVAARGLDISGVDLVVQFRVPMDTESYVHRSGRTGXXXXSGTAVIMYSQDEMRALRKLAMDTGVKFERHGLPSTEKVLSVCADLAAASIDEVDLKVVDYFREQA-EMLVNSENAVDRMAKALALISRRREIVERSILTGQTDQKTMLI--KAREPLAVPVVLRTVSRLAESFGLRVDLGRVSLCQDPTMAVFDMPVEQADALLS 672          
BLAST of Ggra849.t1 vs. uniprot
Match: A0A7S0G6K6 (RNA helicase n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G6K6_9RHOD)

HSP 1 Score: 477 bits (1227), Expect = 1.940e-155
Identity = 266/549 (48.45%), Postives = 361/549 (65.76%), Query Frame = 0
Query:  111 LSHSTVERLAENGIIHPTEVQTGTFDNLYDGKDLIAKSRTGTGKTLAFALPILERLAILKSERQYD----SRQGPACIVLAPTRELAKQVGREMSYIGGGLNISVECFYGGSAYGPQEGALRRGIDVVVGTPGRVMDHLDRGNLRLSNIAFAVLDEADEMLSMGFSQDVETIFETLPSKEERQVILFSATVPPWVKSLASQFQKDDVIMFDAI-TSGTMASTTVRHCAVRVPEREEARASLLADIIAVHSPTKDENLEANGVRTPSRVIVFTQTKREADDLATSGALDGCGAAVLHGDVSQKQREVTLSQFRNGQFQVLVATDVAARGLDISGVDVVVQYRVPHDSESYIHRAGRTGXXXXXGTAVVMYSDREARNLRGLERDCKIKFDMEVAPAPEAALEAAVDVAISNISTVDERVLRHLIPRAAEIAKKGEESTETIAAILAIACRRVRLEDRSVLSGEKGMRTLHITSETRQPLNPGAALRIIKELSRDANLDGHVGLIRMCQ-DGSVVLDVRSEGADELLSTGDRVMADTGLSLALCTGVPVLR 653
            L+   + +L E GI   T VQ GT   + +G+D+IA+SRTGTGKTLAF LPI+ERL+ ++ +          +GP+CI+LAPTRELAKQV  E+ Y+G  L I  +CFYGG +Y  QE A+ RGIDV+VGTPGR++DHL++GNL LS + F VLDEADEMLSMGF+ D+E IF+ LP +EERQ ILFSATVP WVK++A Q QK+  + +DAI       +TTVRHCA+RVPE + +R + L DII  +           G  T SR +VFTQTK+EAD+L TSG + G GAAVLHGDVSQ+QRE+TL+ FR+G+F VLVATDVAARGLDI+G+D+VVQ+ VP D +SYIHRAGRTG     G A++++SDRE   LR +ER C IK +    P+    LEA+   A + +  V+E V+++ + +A+E+ +  E+    +AA LA+  RR + ++RS+L+G    RTL  T  T+  L P   LRII++ S  +      G I +C+ D   V D   E  D LL     +    G+ + +   +P L+
Sbjct:   84 LNERIISKLQEKGITQLTAVQGGTLMQILNGRDIIARSRTGTGKTLAFGLPIVERLSQMRDDSSSPVGKKRGRGPSCIILAPTRELAKQVAAELDYVGSPLRIRTDCFYGGVSYSIQESAISRGIDVLVGTPGRIIDHLEKGNLDLSGVKFGVLDEADEMLSMGFADDIERIFDYLPPREERQTILFSATVPSWVKTIAKQHQKEPYL-YDAIGREQNKTATTVRHCAIRVPEGD-SRGAFLDDIITTYG----------GAMTQSRCLVFTQTKKEADELVTSGVIQG-GAAVLHGDVSQRQREITLAHFRDGRFPVLVATDVAARGLDITGIDIVVQFSVPQDIDSYIHRAGRTGRAGRSGIAILLHSDRENDQLRRVERACGIKLERHGPPSAAKVLEASAQQASACLQEVEENVIKYFVGKASELIE-DEDPKLVLAAALALVARRPKFQERSILTGLTEYRTLSAT--TKFALTPPDILRIIRKASSISGCSTKAGKIVICENDAQAVFDYPVEEVDLLLEGAAELK---GIEIEVLNDLPRLK 613          
BLAST of Ggra849.t1 vs. uniprot
Match: A0A7S1TCK2 (RNA helicase (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TCK2_9RHOD)

HSP 1 Score: 477 bits (1228), Expect = 1.740e-154
Identity = 278/564 (49.29%), Postives = 368/564 (65.25%), Query Frame = 0
Query:   72 SPIQSSLEPLQTDAPSDAAADYSAPEETSNARPTMSSFRLSHSTVERLAENGIIHPTEVQTGTFDNLYDGKDLIAKSRTGTGKTLAFALPILERLAILKSERQYD----SRQGPACIVLAPTRELAKQVGREMSYIGGGLNISVECFYGGSAYGPQEGALRRGIDVVVGTPGRVMDHLDRGNLRLSNIAFAVLDEADEMLSMGFSQDVETIFETLPSKEERQVILFSATVPPWVKSLASQFQKDDVIMFDAITSGTMASTTVRHCAVRVPEREEARASLLADIIAVHSPTKDENLEANGVRTPSRVIVFTQTKREADDLATSGALDGCGAAVLHGDVSQKQREVTLSQFRNGQFQVLVATDVAARGLDISGVDVVVQYRVPHDSESYIHRAGRTGXXXXXGTAVVMYSDREARNLRGLERDCKIKFDMEVAPAPEAALEAAVDVAISNISTVDERVLRHLIPRAAEIAKKGEESTETIAAILAIACRRVRLEDRSVLSGEKGMRTLHITSETRQPLNPGAALRIIKELSRDANLDGHVGLIRMCQDGSV-VLDVRSEGADELLS 630
            SP  S   P Q  +  D + D    E+    +  + ++RLS ST++ L + GI H TEVQ GTFD +YDG+DLIA+SRTGTGKT AF LPILE+L  L  + +        +GPA +VLAPTRELA+QV RE+  +   L + VEC YGG++   Q  +LR G+D++VGTPGR++DHL + +L +S + F VLDE+DEMLSMGF+ DVETI + +P   ERQ +LFSATVPPWVK LA ++Q     MFD++  G  A+TTVRHCAV VP   EAR   L DII+V+           GV   +R IVFTQ KREAD+LATSGAL   GAAVLHGD+SQ QRE+TL QFR+G+F VLVATDVAARGLDI+GVD+V+Q+RVP D +SYIHRAGRT XXXXX TAV+MYS  E   L+  ER C++ F+    P  E  L A    A S +  VDE+V  +  P A ++ K G +  + +A  +A+  R+  + +RSV++GE   +TL + S     LNP   LR+I  ++ D  +   +G I +C D  + V D+ ++ AD LL+
Sbjct:  124 SPRLSRSLPPQDVSDKDESGDTEI-EDPERIKMRIENYRLSPSTIKVLHDKGITHLTEVQQGTFDLIYDGRDLIARSRTGTGKTFAFGLPILEQLGRLAKDPESPIGRLRGRGPASVVLAPTRELAQQVARELGDVAKPLGLQVECVYGGASMQAQLASLRNGVDILVGTPGRIIDHLTQRSLDVSGVKFLVLDESDEMLSMGFADDVETIMKGMPPSGERQTVLFSATVPPWVKDLARKYQNKPA-MFDSVRGGVKAATTVRHCAVLVPREMEARMGFLEDIISVYG---------GGVGR-TRSIVFTQRKREADELATSGALK-FGAAVLHGDISQHQREITLQQFRDGRFAVLVATDVAARGLDITGVDLVIQFRVPEDPDSYIHRAGRTXXXXXXXTAVIMYSPDETAMLKRTERACQVTFEKSGPPGVEKVLAACAVNAASALEEVDEKVRSYFRPAAEDLLKAGLDPADALAGAMALITRKTSVVERSVITGEMDKQTLLVRSSGAF-LNPPKVLRMISRMAEDGGISIKIGKIVICDDPLLAVFDLNAKQADMLLN 673          
BLAST of Ggra849.t1 vs. uniprot
Match: M1UPQ0 (RNA helicase n=2 Tax=cellular organisms TaxID=131567 RepID=M1UPQ0_CYAM1)

HSP 1 Score: 446 bits (1147), Expect = 8.490e-143
Identity = 265/563 (47.07%), Postives = 357/563 (63.41%), Query Frame = 0
Query:   95 APEETSNARPTMSSFRLSHSTVERLAENGIIHPTEVQTGTFDNLYDGKDLIAKSRTGTGKTLAFALPILERLA---ILKSERQYDSRQGPACIVLAPTRELAKQVGREMSYIGGGLNISVECFYGGSAYGPQEGALRRGIDVVVGTPGRVMDHLDRGNLRLSNIAFAVLDEADEMLSMGFSQDVETIFETLPSKEERQVILFSATVPPWVKSLASQFQKDDVIMFDAITSGTMASTTVRHCAVRVPEREEARASLLADIIAVHSPTKDENLEANGVRTPSRVIVFTQTKREADDLA-TSGALDGCGAAVLHGDVSQKQREVTLSQFRNGQFQVLVATDVAARGLDISGVDVVVQYRVPHDSESYIHRAGRTGXXXXXGTAVVMYSDREARNLRGLERDCKIKFDMEVAPAPEAALEAAVDVAISNIS-TVDERVLRHLIP---RAAE---IAKKGEESTETIAAILAIACRRVRLEDRSVLSGEKGMRTLHITSETRQPLNPGAALRIIKELSRDANL-DGHVGLIRMCQDG-SVVLDVRSEGADELL------STGDRVMAD 638
            A  E+ +   ++  F LS +T   L + GI   TE+Q  TF+++  G+D+I +S TGTGKT AF +P++ER+    +    R+    + P  +VL PTRELAKQV  ++  IG    ++V+CFYGG++Y  QE ALRRG DV+VGTPGR++DHLDRG L LSNI  AVLDEADEMLS+GF++DVE IF+ +P KEERQ +LFSAT+PPWV+ +A+Q Q+  V+      + T A+  VRH AVRVP+ + AR ++L DI+  H+ T ++           R IVFT TKREAD++A T+       A VLHGDVSQ+QRE+TL QFR+G+F +LVATDVAARGLDI  VDV+VQ R P D ++YIHRAGRTG XXX GTAV+MYSD E   LR LER   I+F+    P     LE  +DVA  N +  V E     ++P   RAA+    A+   ++   +AA LA+   R  +E RS+L+GE G+RTL +T   R  + P   L I++ LS+   L    +G +R+C+D    V DV  E ADE+L      ST D   +D
Sbjct:   93 ATSESKHRDWSLERFPLSEATAAALRKKGITELTEIQAITFNDMRSGRDVIGRSHTGTGKTFAFGVPLVERMVEARVSNGSRRGAPGRSPCALVLTPTRELAKQVTEQLRLIGQPHGLAVDCFYGGASYTQQEEALRRGFDVLVGTPGRILDHLDRGTLNLSNIRIAVLDEADEMLSLGFAEDVERIFQKMPPKEERQTVLFSATIPPWVQKIAAQHQRAPVVHDVVGRTETRAAKNVRHVAVRVPDADFARFAMLEDIVFAHAETGNQ-----------RCIVFTDTKREADEIAMTASIFRSSVAQVLHGDVSQRQRELTLQQFRDGRFSILVATDVAARGLDIHEVDVIVQMRPPRDVDTYIHRAGRTGRXXXSGTAVIMYSDSERGLLRALERGASIRFEQAGPPT----LERVLDVAAQNAARAVGEASTNRVVPYFQRAADELAAAQFEGDARRALAAALAVISGRTHIEHRSLLTGEAGLRTLLLTMN-RAGVTPRDVLGIVRRLSQSGKLFTDDIGKVRLCRDPRQAVFDVSVEAADEILRCMEPQSTTDATSSD 639          
BLAST of Ggra849.t1 vs. uniprot
Match: A0A7J7ISJ6 (RNA helicase n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ISJ6_9RHOD)

HSP 1 Score: 443 bits (1139), Expect = 9.600e-142
Identity = 261/528 (49.43%), Postives = 346/528 (65.53%), Query Frame = 0
Query:  109 FRLSHSTVERLAENGIIHPTEVQTGTFDNLYDGKDLIAKSRTGTGKTLAFALPILERLAILKSERQYDSRQGPACIVLAPTRELAKQVGREMSYIGGGLNISVECFYGGSAYGPQEGALRRGIDVVVGTPGRVMDHLDRGNLRLSNIAFAVLDEADEMLSMGFSQDVETIFETLPSKEERQVILFSATVPPWVKSLASQFQKDDVIMFDAITSGTMASTTVRHCAVRVPEREEARASLLADIIAVHSPTKDENLEANGVRTPSRVIVFTQTKREADDLATSGAL-DGCGAAVLHGDVSQKQREVTLSQFRNGQFQVLVATDVAARGLDISGVDVVVQYRVPHDSESYIHRAGRTGXXXXXGTAVVMYSDREARNLRGLERDCKIKFDMEVAPAPEAALEAAVDVAISNISTVD-ERVLRHLIPRAAEIAKKGEE--STETIAAILAIACRRVRLEDRSVLSGEKGMRTLHITSETRQP-LNPGAALRIIKELSRDANL-DGHVGLIRMCQDG-SVVLDVRSEGADELL 629
            F LS  T   L E GI   TE+Q  TFD++ +G D+I +S TGTGKT AF +P++ERLA  +   +    + P+ +VL PTRELAKQV  ++  IG   ++ VECFYGG++YGPQE AL+RG+D+VVGTPGR++DH++R  L LS +  A+LDEADEMLSMGF++DVE IF  +PSK ERQ +LFSATVPPWV+ +A+Q Q+  VI      + T A+  VRH AVRVPE + AR ++L DII  H+ + ++           R IVFT TKREAD++A +G++  G  A VLHGDVSQ+QRE+TL QFR+G+F VLVATDVAARGLDI  VDVVVQ R P D+++YIHR+GRT XXXXX TAV MYSD E   LR LER   I+F+    P  E  L+ A   A   +      +V+ H    A E+A    E  +   +AA LA+   R  +E RS+L+GE G+RTL +T    QP ++P   L I++ LS+   L    +G +R+C++    V DV  E ADE+L
Sbjct:  106 FPLSSGTAAVLRERGITELTEIQALTFDDMRNGLDVIGRSHTGTGKTYAFGVPMVERLAAARGGERGARGRPPSALVLTPTRELAKQVTEQLRQIGQPHDLRVECFYGGASYGPQEDALQRGLDIVVGTPGRILDHIERNTLDLSQVRIAILDEADEMLSMGFAEDVERIFNEMPSKNERQTVLFSATVPPWVQKIAAQHQRTPVIHDVVGKTETRAAKNVRHVAVRVPEADFARLAMLEDIIFAHAGSGNQ-----------RCIVFTGTKREADEIAMAGSIFRGSVAQVLHGDVSQRQRELTLQQFRDGRFSVLVATDVAARGLDIHEVDVVVQLRPPRDADTYIHRSGRTXXXXXXXTAVTMYSDAERGLLRSLERGASIRFEHVGPPTLERVLDVAAQNAARAVGEASTNQVVPHFQQAADELATVQFEGDARRALAAALAVISGRTHIEHRSLLTGEIGLRTLLLT--LNQPEISPRDVLGIVRRLSQGGKLFSDDIGKVRLCRNPRQAVFDVSVESADEIL 620          
The following BLAST results are available for this feature:
BLAST of Ggra849.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IZX80.000e+073.93RNA helicase n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
R7QI041.140e-26471.15RNA helicase n=1 Tax=Chondrus crispus TaxID=2769 R... [more]
A0A1X6NKY36.730e-19358.58RNA helicase n=1 Tax=Porphyra umbilicalis TaxID=27... [more]
A0A1X6NYZ27.270e-19154.89RNA helicase n=1 Tax=Porphyra umbilicalis TaxID=27... [more]
A0A7S1TKV53.340e-16253.38RNA helicase (Fragment) n=1 Tax=Erythrolobus austr... [more]
A0A5J4YW055.870e-16253.40RNA helicase n=1 Tax=Porphyridium purpureum TaxID=... [more]
A0A7S0G6K61.940e-15548.45RNA helicase n=1 Tax=Rhodosorus marinus TaxID=1019... [more]
A0A7S1TCK21.740e-15449.29RNA helicase (Fragment) n=1 Tax=Compsopogon caerul... [more]
M1UPQ08.490e-14347.07RNA helicase n=2 Tax=cellular organisms TaxID=1315... [more]
A0A7J7ISJ69.600e-14249.43RNA helicase n=1 Tax=Cyanidiococcus yangmingshanen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 384..465
e-value: 3.0E-30
score: 116.5
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 369..465
e-value: 3.0E-28
score: 98.4
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 361..506
score: 22.026283
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 123..330
e-value: 1.7E-49
score: 180.4
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 135..315
score: 30.892834
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 128..303
e-value: 1.3E-45
score: 155.4
IPR012562GUCTPFAMPF08152GUCTcoord: 558..652
e-value: 2.8E-8
score: 34.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 80..316
e-value: 1.9E-70
score: 239.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 327..562
e-value: 3.9E-48
score: 166.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 180..483
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 679..755
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 700..755
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 679..693
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..107
NoneNo IPR availablePANTHERPTHR47958ATP-DEPENDENT RNA HELICASE DBP3coord: 97..614
NoneNo IPR availablePANTHERPTHR47958:SF24DEAD (ASP-GLU-ALA-ASP) BOX HELICASE 21coord: 97..614
NoneNo IPR availableCDDcd00268DEADccoord: 115..314
e-value: 1.32115E-85
score: 267.0
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 329..474
e-value: 1.72388E-47
score: 162.291
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 259..267

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000202_piloncontigtig00000202_pilon:99460..101727 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra849.t1Ggra849.t1Gracilaria gracilis GNS1m malemRNAtig00000202_pilon 99460..101727 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra849.t1 ID=Ggra849.t1|Name=Ggra849.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=756bp
MVAVRTAFTPALPLRLTPFTAASRLTCPTTVLRPRYVRSCVVAPSLDSQS
KAVAQGAAAAEPLTVLDGALPSPIQSSLEPLQTDAPSDAAADYSAPEETS
NARPTMSSFRLSHSTVERLAENGIIHPTEVQTGTFDNLYDGKDLIAKSRT
GTGKTLAFALPILERLAILKSERQYDSRQGPACIVLAPTRELAKQVGREM
SYIGGGLNISVECFYGGSAYGPQEGALRRGIDVVVGTPGRVMDHLDRGNL
RLSNIAFAVLDEADEMLSMGFSQDVETIFETLPSKEERQVILFSATVPPW
VKSLASQFQKDDVIMFDAITSGTMASTTVRHCAVRVPEREEARASLLADI
IAVHSPTKDENLEANGVRTPSRVIVFTQTKREADDLATSGALDGCGAAVL
HGDVSQKQREVTLSQFRNGQFQVLVATDVAARGLDISGVDVVVQYRVPHD
SESYIHRAGRTGRAGRSGTAVVMYSDREARNLRGLERDCKIKFDMEVAPA
PEAALEAAVDVAISNISTVDERVLRHLIPRAAEIAKKGEESTETIAAILA
IACRRVRLEDRSVLSGEKGMRTLHITSETRQPLNPGAALRIIKELSRDAN
LDGHVGLIRMCQDGSVVLDVRSEGADELLSTGDRVMADTGLSLALCTGVP
VLRDNERRRNDRTDRRRYDDRRRDDRRGDDRRGDDRRGYSRGGGRREGGY
FRGGTRRDGYGKEGGYRRDRYDRDGYGGRNNSRSRFDRRDNFRQRRSPDL
LSDDF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR012562GUCT
IPR027417P-loop_NTPase
IPR000629RNA-helicase_DEAD-box_CS