Ggra8456.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8456.t1
Unique NameGgra8456.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length266
Homology
BLAST of Ggra8456.t1 vs. uniprot
Match: A0A2V3IDD5 (Nudix hydrolase domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDD5_9FLOR)

HSP 1 Score: 255 bits (651), Expect = 7.000e-82
Identity = 128/188 (68.09%), Postives = 152/188 (80.85%), Query Frame = 0
Query:   66 TEFEIVRHERIFQRYQTVFQRDVRFPSGRTVSFDVLGTQHSDFKSVLVLPFNRASRRATLLREYAPGRNAEALSFVGGMFDAARHVDVAHAARAELSEEARLTGGKLLPLAARGVAADKYSLNEFFFFLALDCVADEAPPPRDDDEWISEVFDAPLRHVRRLIGAGQLNTPHSLLGLLALDKLRELGF 253
            ++FEI+ H  IFQRYQTV+QRDVRFPSG TVS+DVLG+  SDFKSV V PFNR + RAT+LREYAPGRNAE  SFV GM++ A+H DV  AA  EL+EEARL GG+L+ LA   +AADKYS+NE+FFFLALDC  DE P  RDD+EWIS V+D  L  VR+LI  GQLNTP+SLLG+LALDKLR++GF
Sbjct:   64 SQFEILEHRPIFQRYQTVYQRDVRFPSGYTVSYDVLGSVRSDFKSVFVFPFNRMTNRATVLREYAPGRNAETYSFVAGMYEPAKHNDVYAAAMTELNEEARLKGGQLISLADN-IAADKYSMNEYFFFLALDCRPDEQPANRDDEEWISGVYDIELSQVRKLISRGQLNTPNSLLGMLALDKLRDIGF 250          
BLAST of Ggra8456.t1 vs. uniprot
Match: A0A7S2ZFG6 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZFG6_9RHOD)

HSP 1 Score: 159 bits (403), Expect = 1.110e-44
Identity = 86/183 (46.99%), Postives = 114/183 (62.30%), Query Frame = 0
Query:   67 EFEIVRHERIFQRYQTVFQRDVRFPSGRTVSFDVLGTQHSDFKSVLVLPFNRASRRATLLREYAPGRNAEALSFVGGMFDAARHVDVAHAARAELSEEARLTGGKLLP-LAARGVAADKYSLNEFFFFLALDCVADEAPPPRDDDEWISEVFDAPLRHVRRLIGAGQLNTPHSLLGLLALDKL 248
            +F I+  +  FQRYQTV++R +R+P+G+ VSFDV G   SDFKSV V P++  ++  TLLREY PG N     F  G FD  +H  +  AAR+ELSEEA LTGG   P L + GV+ DKYS N F  FL L+ V DE P PRD++E+I  V    L  +++++  G +N P    G  ALD L
Sbjct:   39 KFSILDEKVSFQRYQTVYERLIRYPNGKRVSFDVFGNPRSDFKSVFVFPYDTRTKTVTLLREYIPGINEVMWGFPAGGFDPKKHKSLEDAARSELSEEAFLTGGSYFPMLESGGVSQDKYSKNMFHMFLVLNPVEDENPLPRDEEEYIQIVKGVTLPRLQKILAQGGMNLPSGFCGYRALDAL 221          
BLAST of Ggra8456.t1 vs. uniprot
Match: A0A7S1XDJ4 (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XDJ4_9RHOD)

HSP 1 Score: 151 bits (382), Expect = 2.210e-41
Identity = 83/190 (43.68%), Postives = 114/190 (60.00%), Query Frame = 0
Query:   66 TEFEIVRHERIFQRYQTVFQRDVRFPSGRTVSFDVLGTQHSDFKSVLVLPFNRASRRATLLREYAPGRNAEALSFVGGMFDAARHVDVAHAARAELSEEARLTGGKLLPL------AARGVAADKYSLNEFFFFLALDCVADEAPPPRDDDEWISEVFDAPLRHVRRLIGAGQLNTPHSLLGLLALDKLR 249
            ++F I     +++ Y++VFQR VR+PSG + +FD++G  H D  SV V PF R SR ATL++EY PG N      + G  +  +H  +  AAR EL+EEA L GG+L+PL      ++ G   DKYS + F  FLALD   D +PP +D +E+I  V    L  VR L+  GQ+N P SL  LLAL+ LR
Sbjct:   59 SDFTIESDTEVYRGYRSVFQRRVRYPSGESFTFDIVGRPHGD-SSVFVFPFCRRSRSATLIKEYNPGGNGVLYGVIAGFVEMGKHTSIVDAARRELAEEANLIGGQLIPLQRQTDSSSAGYLKDKYSTDRFHMFLALDSELDPSPPQQDPEEFIEIVRGVSLDQVRTLVFNGQMNVPCSLACLLALEHLR 247          
BLAST of Ggra8456.t1 vs. uniprot
Match: A0A5J4YLI7 (Nudix hydrolase domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YLI7_PORPP)

HSP 1 Score: 142 bits (357), Expect = 1.270e-37
Identity = 83/183 (45.36%), Postives = 110/183 (60.11%), Query Frame = 0
Query:   69 EIVRHERIFQRYQTVFQRDVRFPSGRTVSFDVLGTQHSDFKSVLVLPFNRASRRATLLREYAPGRNAEALSFVGGMFDAARHVDVAHAARAELSEEARLTGGKLLPL-AARGVAADKYSLNEFFFFLALDCVADEAPPPRDDDEWISEVFDAPLRHVRRLIGAGQLNTPHSLLGLLALDKLRE 250
            E VR+ER    Y+T+++R V +P G   SFDV G+  ++F SVLV PFN A++   L+REY PG +A    FV G FDA  H D   AARAELSEEA LTGG +  L +   V  DKYSL+ F  FLALD   D  P  RD++E I  V D P+     ++  G+ N   + L L+A ++LR+
Sbjct:   69 EAVRYER----YKTIYERVVTYPDGAEYSFDVEGSPRANFSSVLVFPFNSAAKTTVLIREYHPGLHALRYGFVAGFFDAKVHADEEAAARAELSEEAHLTGGTMQLLNSGAPVPRDKYSLDYFHMFLALDAHLDLRPRERDEEERIDIVRDVPVTEAIDMVFRGEFNLSSATLCLMAAERLRK 247          
BLAST of Ggra8456.t1 vs. uniprot
Match: A0A7S2SS02 (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SS02_9STRA)

HSP 1 Score: 119 bits (299), Expect = 9.790e-29
Identity = 79/187 (42.25%), Postives = 105/187 (56.15%), Query Frame = 0
Query:   80 YQTVFQRDV--RFPSGRTVSFDVLGTQHSDFKSVLVLPFNRASRRATLLREYAPGRNAEALSFVGGMFDAARHVDVAHAARAELSEEARLTGGKLLPLAARG----------VAADKYSLNEFFFFLALDC--VADEAPPPRDDDEWISEVFDAPLRHVRRLIGAGQLNTPHSLLGLLALDKLRELG 252
            ++TV +RDV  R       SFDV+G+ H D+ SVLV  ++  +  ATL++EY PG        V G F+  +H    HAA+ EL EEARL GG+ +PL  RG          VA DKYS N FF +LA+DC  V +    PRD +E I          +R L+ +G+LN P S   LLALD+LRE+G
Sbjct:   96 WRTVIRRDVLLRETPRMEASFDVIGSNHGDY-SVLVFAWDSTTHTATLIQEYHPGPREWQWGVVAGGFEPHKHGSSCHAAQCELEEEARLVGGRWIPLL-RGPHEPDSEPPVVAHDKYSTNRFFPWLAVDCEEVEESVARPRDAEESIVVRRGVTEAQLRELVSSGRLNVPSSYTVLLALDRLREIG 280          
BLAST of Ggra8456.t1 vs. uniprot
Match: A0A2V0PFC5 (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PFC5_9CHLO)

HSP 1 Score: 120 bits (302), Expect = 9.840e-29
Identity = 79/199 (39.70%), Postives = 108/199 (54.27%), Query Frame = 0
Query:   67 EFEIVRHERIFQRYQTVFQRDVRFPS-----GRTVSFDVLGTQHSDFKSVLVLPFN----RASRRATLLREYAPGRNAEALSFVGGMFDAARHVDVAHAARAELSEEARLTGGKLLPLAAR---GVAADKYSLNEFFFFLALDCVADEAPPPRDDDEWISEVFDAPLRHVRRLIGAGQLNTPHSLLGLLALDKLRELGF 253
            +FEI   E + +RY T++ R VRF +      R V+FDV+G   S F+  +  PF+    R     T++REYA G N+       G FD  +H D+   A+AELSEEA L GG+ LPL A    G+A  K+ +N F  FL +D VAD  P  RD +E   EV   PL   R L+ +G +  P      LA+DKL+E G+
Sbjct:  133 QFEISTEEILHKRYLTLYNRRVRFTAPGHDVSRDVNFDVVGHPQSAFRFAVTFPFHPYRDRKGGEVTVIREYAQGPNSLMYCLPTGGFDPRKHTDLEACAKAELSEEAWLKGGRWLPLLAPDHPGLAEVKWCVNRFRPFLVVDPVADADPGSRDLEEVTLEVLRMPLEEFRALMISGDMLLPSIATSYLAIDKLKEEGY 331          
BLAST of Ggra8456.t1 vs. uniprot
Match: A0A137PGI9 (Uncharacterized protein n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137PGI9_CONC2)

HSP 1 Score: 110 bits (276), Expect = 3.130e-26
Identity = 67/170 (39.41%), Postives = 97/170 (57.06%), Query Frame = 0
Query:   67 EFEIVRHERIFQRYQTVFQRDVRFPSGRTVSFDVLGTQHSDFKSVLVLPFNRASRRATLLREYAPGRNAEALSFVGGMFDAARHVDVAHAARAELSEEARLTGGKLLPL---AARGVAADKYSLNEFFFFLALDCVADEAPPPRDDDEWISEVFDAPLRHVRRLIGAGQL 233
            +F+I++   +F+RY  +  R V FP GR + +DV+   HS   +V+V+PF   ++   LL EYA G N     F  G +D A+H  +  AA+ ELSEEARLTGG L+PL    + GVA  K+S N F+ FL +D   D  P  RD +E+I  V D  +  +   I  G++
Sbjct:   10 KFKIIKENIMFKRYIRISDRRVEFPDGRQIDWDVVS--HST-AAVIVVPFFTKTKTIHLLSEYAQGLNEMTYCFASGGYDPAKHSSLDEAAKCELSEEARLTGGTLIPLLPPGSPGVAEVKWSSNRFYPFLVIDPEIDTEPKQRDAEEFIELVPDQSIDSIEHKIFNGEM 176          
BLAST of Ggra8456.t1 vs. uniprot
Match: A0A4D9D3K8 (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D3K8_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.130e-25
Identity = 75/195 (38.46%), Postives = 109/195 (55.90%), Query Frame = 0
Query:   64 AATEFEIVRHERIFQ-RYQTVFQRDVRFPSGRTVSFDVLGTQHSDFKSVLVLPFNRASRRATLLREYAPGRNAEALSFVGGMFDAARHVDVAHAARAELSEEARLTGGKLLPL----AARGVAADKYSLNEFFFFLALDCV--ADEAPPPRDDDEWISEVFDAPLRHVRRLIGAGQLNTPHSLLGLLALDKLREL 251
            A  +F +++ + +++ +++++ QRDV++P GR V+FDV+    S   SVLV  +N  S   TL+ EYAPG      + V G  +  +H D  HAA  EL EEA L GG    L       GVAADKYS   F F+L +D V   ++    RDD+E +    +  L  VRRLI  G++  P +   LLA++KLR L
Sbjct:   75 APQDFTLLKEKDLYRGKWRSLLQRDVQYPDGRQVTFDVMDQPGS---SVLVFIWNSTSHTTTLIEEYAPGSLQVIFTPVAGGCEDEKHEDPQHAAVLELEEEAHLKGGTWFNLLEGEGEEGVAADKYSTCPFHFYLVVDPVREVEKNARKRDDEELLVVHREVTLVEVRRLIRRGKMTVPGACASLLAMEKLRAL 266          
BLAST of Ggra8456.t1 vs. uniprot
Match: A0A5J4XJB9 (Zinc finger protein n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XJB9_9CHLO)

HSP 1 Score: 106 bits (265), Expect = 3.940e-24
Identity = 70/203 (34.48%), Postives = 107/203 (52.71%), Query Frame = 0
Query:   63 AAATEFEIVRHERIFQRYQTVFQRDVRFPSGRTV-----SFDVLGTQHSDFKSVLVLPFNRASRRA----TLLREYAPGRNAEALSFVGGMFDAARHVDVAHAARAELSEEARLTGGK---LLPLAARGVAADKYSLNEFFFFLALDCVADEAPPPRDDDEWISEVFDAPLRHVRRLIGAGQLNTPHSLLGLLALDKLRELGF 253
            A +  F I++ E+++QRY T++ R +RFPS +        FDV+G   + F    V PF+ A+  A    T+L+E+  G N    S   G FDA RH D A  ARAEL EEA+L GG+   LL L   G+A  K+  N F  FL +   A      +D +E+I E+    +  +R ++ +G +  P      +A+++L+  GF
Sbjct:   41 AESAAFAIIKEEKLYQRYFTLYDRRIRFPSSKERPAEEHDFDVIGHPQASFHFSAVFPFHPATEEAPAEVTILKEFCQGPNQMMYSLPAGSFDAQRHGDYAGCARAELWEEAQLEGGEWVDLLGLGHPGIAEVKWCANRFTPFLCIAPQAAATAGKQDAEEFI-EIHRMSIASLREVMRSGNMLLPSVTTAFMAIEELQRRGF 242          
BLAST of Ggra8456.t1 vs. uniprot
Match: A0A8H7BP86 (Uncharacterized protein n=1 Tax=Apophysomyces ossiformis TaxID=679940 RepID=A0A8H7BP86_9FUNG)

HSP 1 Score: 102 bits (255), Expect = 4.640e-23
Identity = 68/189 (35.98%), Postives = 96/189 (50.79%), Query Frame = 0
Query:   66 TEFEIVRHERIFQRYQTVFQRDVRFPSGRTVSFDVLGTQHSDFKSVLVLPFNRASRRATLLREYAPGRNAEALSFVGGMFDAARHVDVAHAARAELSEEARLTGGK---LLPLAAR-GVAADKYSLNEFFFFLALDCVADEAPPPRDDDEWISEVFDAPLRHVRRLIGAGQLNTPHSLLGLLALDKLRE 250
            T  EI+     ++R+ TV+ R  RF  GR V +DV+G        V V  F+ A +   +L+EYA G N    S V G +D  +H     +A+ ELSEEARLTGGK   LLP   + G++  K+  N F  +L LD   D  P  RD +E I  + D  +  ++  I  GQ+  P      +AL+ L E
Sbjct:   13 TAAEILSETIAYKRFITVWNRKTRFSDGRVVEWDVVGHNTPYPTFVTVFTFDSAKKTTCILKEYAQGTNEVKYSCVAGSYDRRKHSSPLQSAQHELSEEARLTGGKWICLLPEDQQDGISELKWGRNRFVPYLCLDPHTDHQPRARDAEECIEVMQDVDITDIKNFITRGQVMLPSVQTAWMALEYLAE 201          
The following BLAST results are available for this feature:
BLAST of Ggra8456.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IDD57.000e-8268.09Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A7S2ZFG61.110e-4446.99Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S1XDJ42.210e-4143.68Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YLI71.270e-3745.36Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A7S2SS029.790e-2942.25Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2V0PFC59.840e-2939.70Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A137PGI93.130e-2639.41Uncharacterized protein n=1 Tax=Conidiobolus coron... [more]
A0A4D9D3K81.130e-2538.46Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A5J4XJB93.940e-2434.48Zinc finger protein n=1 Tax=Trebouxia sp. A1-2 Tax... [more]
A0A8H7BP864.640e-2335.98Uncharacterized protein n=1 Tax=Apophysomyces ossi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.79.10Nucleoside Triphosphate Pyrophosphohydrolasecoord: 64..256
e-value: 1.8E-22
score: 81.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..59
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..265
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
IPR000086NUDIX hydrolase domainPFAMPF00293NUDIXcoord: 110..216
e-value: 1.0E-4
score: 22.4
IPR015797NUDIX hydrolase-like domain superfamilySUPERFAMILY55811Nudixcoord: 74..245

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:768667..769464 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8456.t1Ggra8456.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 768667..769464 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8456.t1 ID=Ggra8456.t1|Name=Ggra8456.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=266bp
MCATAFAFATVSPLRRGVLGARTLCSRRAAPRASSRAPQPQPQPQPQPQP
QPQPQRQPPQAPAAATEFEIVRHERIFQRYQTVFQRDVRFPSGRTVSFDV
LGTQHSDFKSVLVLPFNRASRRATLLREYAPGRNAEALSFVGGMFDAARH
VDVAHAARAELSEEARLTGGKLLPLAARGVAADKYSLNEFFFFLALDCVA
DEAPPPRDDDEWISEVFDAPLRHVRRLIGAGQLNTPHSLLGLLALDKLRE
LGFGDDDDDDDARLP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000086NUDIX_hydrolase_dom
IPR015797NUDIX_hydrolase-like_dom_sf