Ggra8450.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8450.t1
Unique NameGgra8450.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length268
Homology
BLAST of Ggra8450.t1 vs. uniprot
Match: R7QL44 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL44_CHOCR)

HSP 1 Score: 236 bits (602), Expect = 2.050e-73
Identity = 123/268 (45.90%), Postives = 166/268 (61.94%), Query Frame = 0
Query:    1 MQLTDDHKRRFIRDGYVQLPRVVPRAEVAALLAVTDRMYASKQYTLHDSNKDILPHFAAACEQHATLTSLPRRTPMLSLCEQLLGAGNVALPARAQIAYRPYDQRLARSGMSPADAICRHWYHVDGGDGKYARTASPFTLLVGVCLSAGQTVDDNRGQLNVWPASHVTLHQVLKQRIQAGLIT--GRNLFGVAKEKPDIGPAKRVLMDVGDVVLAHHRLGHSGGVNLHHHVRKNLYYRVTHKRHDQLLPAVWS-ASLWTEYDGLRHLV 265
            M LT++ KR FIRDGY+ L  V  R      L V D+  A   +T  D+  D+      A E +  +T     T +   CE L+G G +     AQIA RP +++    GM+  + + +H +H+DGG GKY +TASPFTLLVGV LS GQ +++NRGQLNVWP SH  LH +L++R+Q  L+T  G+NLFG    KPDIG  KRVL+  GD  +AH RLGHSGGVNLH   R  LY+RV+HK HD  L  +   +S++ E++G++ LV
Sbjct:   60 MVLTEEQKRSFIRDGYLVLRNVATREMAKDALRVVDKARAKGAFTEEDALPDVKREAERAPEIYRMMTD----TILPEACEDLIGKGKIKYGKNAQIAIRPTEEKFKEKGMTMTENMPKHKWHIDGGKGKYRKTASPFTLLVGVALSEGQDIEENRGQLNVWPGSHFKLHPLLRERVQKDLVTDNGQNLFGYGPGKPDIGQPKRVLLRPGDACIAHQRLGHSGGVNLHADPRIQLYFRVSHKNHDDCLEQILEGSSVFLEFEGIKELV 323          
BLAST of Ggra8450.t1 vs. uniprot
Match: A0A2V3II39 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II39_9FLOR)

HSP 1 Score: 161 bits (408), Expect = 7.990e-45
Identity = 103/267 (38.58%), Postives = 139/267 (52.06%), Query Frame = 0
Query:    3 LTDDHKRRFIRDGYVQLPRVVPRAEVAALLAVTDRMYASKQYTLHDSNKDI--LPHFAAACEQHATLTSLPRRTPMLSLCEQLLGAGNVAL-PARAQIAYRPYDQRLARSGMSPADAICRHWYHVDGGDGKYARTASPFTLLVGVCLSAGQTVDDNRGQLNVWPASHVTLHQVLKQRIQAGLITGRNLFGVAKEKPDIGPAKRVLMDVGDVVLAHHRLGHSGGVNLHHHVRKNLYYRVTHKRHDQLLPAV-WSASLWTEYDGLRHLV 265
            LT+  K  FIRDGYV LP +VP     A L   D  Y SK+Y L  +N +    P F  + +    +T L  +T +  + E LLG  N  L     QIAY   D+    SG+   D   ++ +H+D   G YA   + F L+ GV LS GQ VD NRGQL VWP SH   H+++++ IQ        +      KPD+G  KRVL+  GD  + H RL H+ GVN    +RKN+Y+R++ K HD  LP    S + W  Y GL  L+
Sbjct:    4 LTEVQKLEFIRDGYVVLPGIVPFDMAGAALYHCDIAYESKKYNLPQNNGNYRPTPSFWHSVKSANPVTDLFYKTDLYQVAEDLLGPSNTVLRKEEGQIAYTLPDEE---SGLGLDDDHPKNKWHIDTPQGPYANQGTSFILMFGVALSEGQIVDQNRGQLTVWPGSHFRTHKLMREIIQTHP-ADEVVRKFKSWKPDLGFPKRVLVMPGDGFIVHQRLAHAPGVNKFSKIRKNIYFRLSTKMHDATLPKFNLSPTPWVGYHGLGDLL 266          
BLAST of Ggra8450.t1 vs. uniprot
Match: A0A2V3II10 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II10_9FLOR)

HSP 1 Score: 126 bits (316), Expect = 5.070e-31
Identity = 90/266 (33.83%), Postives = 130/266 (48.87%), Query Frame = 0
Query:    3 LTDDHKRRFIRDGYVQLPRVVPRAEVAALLAVTDRMYASKQYTLHDSNKDILPHFAAACEQHATLTSLPRRTPMLSLCEQLLGAGNVALPARAQIAYRPYDQRLARSGMSPADAICRHWYHVD-GGDGKYARTASPFTLLVGVCLSAGQTVDDNRGQLNVWPASHVTLHQVLKQRIQAGL--ITGRNLFGVAKEKPDIGPAKRVLMDVGDVVLAHHRLGHSGGVNLHHHVRKNLYYRVTHKRHDQL--LPAVWSAS--LWTEYDGL 261
            L      + +  GY  +  V+P   V   L        ++ Y L + +   LP F  A ++   + +L   + +  L E +  +    L    QIA RP D+ L + G+       R  +HVD GG GKY +  + F+LLVGV L+  +  D N GQLNVWP SHV LH+ L++ ++  +  IT    F   + +PDIG   RV +  GDVVLAH RLGH GG N+    R  +Y+RV    H     +   W     +WT +DGL
Sbjct:   31 LDASQTEQLLSQGYTVIKNVIPADVVKKALGHISSARKNENYVLRNGSG--LPSFYDAVQEADQIMNLMTTSSLQRLLESIYDSEIEILGGAGQIAIRPVDEDLVKRGVDKHKRANRTAWHVDEGGSGKYVQRPADFSLLVGVALTDSEG-DVNSGQLNVWPGSHVKLHEALQEHLRRDVEGITPNVRF--TEGRPDIGKPVRVCVLKGDVVLAHQRLGHCGGPNVVQE-RIMVYFRVRKSGHGNSNGVRERWMRGDGVWTGFDGL 290          
BLAST of Ggra8450.t1 vs. uniprot
Match: R7QKB4 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKB4_CHOCR)

HSP 1 Score: 123 bits (308), Expect = 2.420e-30
Identity = 72/244 (29.51%), Postives = 122/244 (50.00%), Query Frame = 0
Query:   28 VAALLAVTDRMYASKQYTLHDSNKD----ILPHFAAACEQHATLTSLPRRTPMLSLCEQLLGAGNVALPARA-QIAYRPYDQRLARSGMSPADAICRHWYHVDGGDGKYARTASPFTLLVGVCLSAGQTVDDNRGQLNVWPASHVTLHQVLKQRIQAGLITGRNLFGVAKEKPDIGPAKRVLMDVGDVVLAHHRLGHSGGVNLHHHVRKNLYYRVTHKRHDQLLPAVWSASL-WTEYDGLRHLV 265
            V   LAV D  + +++Y  +   +      LP F     ++  +  L  ++ ++   EQL+G G+V L      +++    +  A  GM   +      + +  G G Y  +      +VGV LS GQ VD+NRGQ  VWP SHV +H VL Q ++        L  +  +K D+G  KR+L+  GD  +AH RL  + G+NL   VRK++Y+++ H  +D++      + L +T ++ L+ +V
Sbjct:    2 VGQALAVVDNAFKNEKYASNGKKRFGSNYPLPLFQKPIRRNQKVRDLFFKSGLVDASEQLIGEGHVTLRENMPDVSFNAQSELAAEEGMGLTEPFPSRKWQMQSGQGFYKGSGGDCNFMVGVALSDGQDVDENRGQFTVWPGSHVIIHPVLSQLVREDPPPDHLLKALRAKKIDVGSPKRILLKPGDAFIAHQRLASTQGINLLKKVRKSVYFKIAHTDYDEMQDEFLESKLPFTGFEPLQDIV 245          
BLAST of Ggra8450.t1 vs. uniprot
Match: R7QI68 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI68_CHOCR)

HSP 1 Score: 121 bits (304), Expect = 2.650e-30
Identity = 67/165 (40.61%), Postives = 95/165 (57.58%), Query Frame = 0
Query:    1 MQLTDDHKRRFIRDGYVQLPRVVPRAEVAALLAVTDRMYASKQYTLHDSNKDILPHFAAACEQHATLTSLPRRTPMLSLCEQLLGAGNVALPARA-QIAYRPYDQRLARSGMSPADAICRHWYHVDGGDG-KYARTASPFTLLVGVCLSAGQTVDDNRGQLNVWP 163
            M  T   +  F+RDGYV L  VVP  +    L+  D  +A+ +Y++ ++  D LP F    +  + LT L  +T +L   E L G GNVA+   A QIA+RP + R+   G   A  +    +H+D G G KY +++S FT LVGV LS GQ +D+NRGQL+VWP
Sbjct:   30 MSFTRKDRDDFVRDGYVILQNVVPVQKARDALSYVDEAFATNRYSVRENKDDKLPAFWDKEQNSSVLTDLVLKTGILPALEHLYGTGNVAILGNAGQIAFRPRNDRMIAKGFQKAQLMGSTSWHIDDGPGGKYVKSSSCFTTLVGVPLSPGQEIDENRGQLHVWP 194          
BLAST of Ggra8450.t1 vs. uniprot
Match: phytanoyl-CoA dioxygenase family protein n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D0F72C9 (phytanoyl-CoA dioxygenase family protein n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D0F72C9)

HSP 1 Score: 97.1 bits (240), Expect = 2.080e-20
Identity = 91/268 (33.96%), Postives = 119/268 (44.40%), Query Frame = 0
Query:    1 MQLTDDHKRRFIRDGYVQLPRVVPRAEVAALLAVTDRMYASKQYTLHDSNKDILPHFAAACEQHATLT---SLPRRTPMLSLCEQLLGAGNVALPARAQIAYRPYDQRLARSGMSPADAICRHWYHVDGGDGKYARTASPFTLLVGVCLSAGQTVDDNRGQLNVWPASHVTLHQVLKQRIQAGLITGRNLFGVAKEKPDIGPAKRVLMDVGDVVLAHHRLGHSGGVNLHHHVRKNLYYRVTHKRHDQLLPAVWSASLWTEYDGLRHLV 265
            M+L DD  RRF  DG++ LP VV  A +AA  A  D + A       D    +   F    E  A L     + RR+P LSL EQL+       P     A+   D     +  +P D I     H+DG        AS FTLLVGV LS     + + G L VWP SH+   Q+ ++R    L        +  + P +     VL   GD+VLAHH LGH+ G N     R+ LYYR+    H     A +    WTEY  +R  V
Sbjct:    1 MRLDDDDLRRFATDGHLLLPGVVDEALLAAADAEVDELVAGTPPMEGDGGPGVNAWF----EPRARLPRCEDVLRRSPALSLAEQLVD------PLGLDFAF---DHVQVSTTTAPYDHI-PGGPHIDGHAPGQDPPAS-FTLLVGVLLS--DQSEPSTGNLWVWPGSHLDHQQLFRERGTKVLQGSGGHSTLIPDPPVLARQVPVLGRRGDLVLAHHLLGHNKGGNTAPQQRRTLYYRLAATGHTDRWEATY-LDAWTEYAPVRAAV 250          
BLAST of Ggra8450.t1 vs. uniprot
Match: A0A6G0XGC4 (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XGC4_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 1.480e-18
Identity = 81/248 (32.66%), Postives = 117/248 (47.18%), Query Frame = 0
Query:    3 LTDDHKRRFIRDGYVQLPRVVPRAEV-AALLAVTDRMYASKQYTLHDSNKDILPHFAAACEQHATLTSLPRRTPMLSLCEQLLGAGNVALPARAQIAYRPYDQRLARSGMSPADAICRHWYHVDG-GDGKYARTASPFTLLVGVCLSAGQTVDDNRGQLNVWPASHVTLHQVLKQRIQAGL---ITGRNLFGVAKEKPDIGPAKRVLMDVGDVVLAHHRLGHSGGVNLHHHVRKNLYYRVTHKRHDQL 245
            LT      F R+GY+ LPR VP   V  AL  +   +   +   + +   +     A     H  +  L R  P+ +  E L+G   V  P  AQ+A R  +        +P +     W H DG   GK+    +PFTLLVG+ LSA  T   + G L V+P +H  LH +L+      L   ++   ++G   E PD+G    +L+  GDVVLAH +L H GG N   H+R  +Y+R+ HK H  L
Sbjct:  150 LTPSQIASFCREGYLILPRAVPLELVHEALRRINHDL--GRPGMMVEGGVEGAAKLAGTTSNHPAILDLFR--PVHAAVESLVGRTCVVPPQGAQLALRFPEVA------TPYEPKGTEW-HTDGMRQGKW----NPFTLLVGIALSATPTA--HSGNLIVFPKTHHRLHAMLQDNASELLRVCVSADQVWGDG-ELPDMGVPVPLLLQPGDVVLAHPKLAHRGGPNFSPHIRYQVYFRIKHKDHAAL 379          
BLAST of Ggra8450.t1 vs. uniprot
Match: phytanoyl-CoA dioxygenase family protein n=1 Tax=Desertimonas flava TaxID=2064846 RepID=UPI000E3533AF (phytanoyl-CoA dioxygenase family protein n=1 Tax=Desertimonas flava TaxID=2064846 RepID=UPI000E3533AF)

HSP 1 Score: 81.6 bits (200), Expect = 9.070e-15
Identity = 81/266 (30.45%), Postives = 117/266 (43.98%), Query Frame = 0
Query:    3 LTDDHKRRFIRDGYVQLPRVVPRAEVAALLAVTDRMYASKQYTLHDSNKDILPHFA-AACEQHATLTSLPRRTPMLSLCEQLLGAGNVALPA-RAQIAYR--PYDQRLARSGMSPADAICRHWYHVDGGDGKYARTASPFTLLVGVCLSAGQTVDDNRGQLNVWPASHVTLHQVLKQRIQAGLITGRNLFGVAKEKPDIGPAKRVLMDVGDVVLAHHRLGHSGGVNLHHHVRKNLYYRVTHKRHDQLLPAVWSASLWTEYDGLRHL 264
            LT++    F RDGY+ +P VV    +AA  A  D + A+        +  +  HF     E+     +  R +  L L +QL+  G+V       Q+A    PY  R    G+           H+DG   +     S FT+L  V LS     +  RG L VWP SHV   Q+   R    L       G+       GP + +L + GD++LAH+ LGH+ G N   HVR+ LYYR+    H +     ++  L  EY+ LR L
Sbjct:    2 LTEEQLHAFARDGYLVVPGVVGEDLLAAADAEVDAIVAADP----PPDGTVGSHFYFLPPERLPAADAALRASVALELADQLVAPGSVDHAFDHIQVALNIPPYPHR---PGIP----------HIDGH--RPDEPISSFTMLAAVFLS--DESEPERGNLWVWPGSHVGHQQIFTDRGVETLKPVSGHAGLLDPPVFFGPGQPLLANRGDLLLAHYLLGHNIGGNTSGHVRRVLYYRLARADHRERWADTFTDVL-AEYEPLRGL 245          
BLAST of Ggra8450.t1 vs. uniprot
Match: A0A651HBQ9 (Uncharacterized protein n=1 Tax=Puniceicoccaceae bacterium TaxID=2026784 RepID=A0A651HBQ9_9BACT)

HSP 1 Score: 72.4 bits (176), Expect = 3.390e-11
Identity = 73/271 (26.94%), Postives = 119/271 (43.91%), Query Frame = 0
Query:    1 MQLTDDHKRRFIRDGYVQLPRVVPRAEVAALLAVTDRMYASKQYTLHDSNKDILPHFAAA--CEQ---HATLTSLPRRTPMLSLCEQLLGAGNVALPARAQIAYRPYDQRLARSGMSPADAICRHWYHVDGGD-GKYARTASPFTLLVGVCLSAGQTVDDNRGQLNVWPASHVTLHQVLKQRIQAGLITGRNLFGVAKEKPDIGPAKRVLMDVGDVVLAHHRLGHSGGVNLHHHVRKNLYYRVTHKRHDQLLPAVWSASLWTEYDGLRHLV 265
            + L+ + +R    DGY+ L   VP      L+    R   +        + D LP   +   C++      +  L R+TP+ ++ E L+GAGN+    RAQIA R + Q +AR    P   +      ++G   G + R+   FT+L  V L      +D  G   VWP SH       +   +   I  +   G+ +++   GP + +    GDVVL+HH+L H    N    +R    +R+ H        +V S  +W E+ G+R +V
Sbjct:   27 LPLSYNERRSLYEDGYIVLRGAVPE-----LMVRNARRAINASLGERGLHPDELPEMRSRTYCKELVEDPVIVDLARKTPVATMGEFLVGAGNLRPVTRAQIALR-FPQIVARP-REPGGHLDGIGTGINGVPVGTFIRS---FTMLAVVLLQ--DVPEDYMGSFTVWPGSHRFFEDFFRDPKRDPSILAK---GMPEDELPHGPIQ-IRGQAGDVVLSHHQLVHGAAPNYSPEIRYAAIFRLGHVDAQANGSSVMS-DIWREWPGMRDVV 280          
BLAST of Ggra8450.t1 vs. uniprot
Match: W2RCK8 (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=W2RCK8_PHYPN)

HSP 1 Score: 72.0 bits (175), Expect = 9.480e-11
Identity = 70/261 (26.82%), Postives = 105/261 (40.23%), Query Frame = 0
Query:   11 FIRDGYVQLPRVVPRAEVAALLAVTDRMYASKQYTLHDSNKDILPHFAAACEQHATLTSLPRRTPMLSLCEQLLGAGNVALPARAQIAYRPYDQRLARSGMSPADAICRHWYHVDGGDGKYARTASPFTLLVGVCLSAGQTVDDNRGQLNVWPASHVTLHQVLK----------QRIQAGLITGRNLFGVAKEKPDIGPAKRVLMDVGDVVLAHHRLGHSGGVNLHHHVRKNLYYRVTHKRHDQLLPAVWSASLWTEYDGL 261
            F+++GY+Q+   VP     A L   +         + D   +     A        +  L   + +    E L+G   V  P  AQIA R         G  P + +   W+     DG       PFTLL G+ LS     +   G L V+  SH++LH  L           +  +A  + G          PD+G   ++L   GD+VLAH  L H GG+N    +R  +Y+R+ HKR ++L        LW +  GL
Sbjct:  160 FMQNGYLQIRGAVPLPLANAALRRINHDLGIPGNMI-DGGVEGAIKLAGKTSNSDVILDLYYLSDVSKYVEALVGIDQVVPPQGAQIALR-----FPELG-EPREPLGTEWHT----DGMRQGHLHPFTLLAGIALS--NVPEPLCGNLTVFSGSHMSLHSRLTADGKLRGHDDECYKADSVWGDGTL------PDLGTPVQLLAARGDLVLAHPNLAHRGGLNFSPDIRYQVYFRIKHKRLNELQQDC-ITDLWADLQGL 400          
The following BLAST results are available for this feature:
BLAST of Ggra8450.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
R7QL442.050e-7345.90Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3II397.990e-4538.58Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3II105.070e-3133.83Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QKB42.420e-3029.51Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QI682.650e-3040.61Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
phytanoyl-CoA dioxygenase family protein n=1 Tax=Aquihabitans sp. Kera 3 TaxID=2884263 RepID=UPI001D0F72C92.080e-2033.96phytanoyl-CoA dioxygenase family protein n=1 Tax=A... [more]
A0A6G0XGC41.480e-1832.66Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
phytanoyl-CoA dioxygenase family protein n=1 Tax=Desertimonas flava TaxID=2064846 RepID=UPI000E3533AF9.070e-1530.45phytanoyl-CoA dioxygenase family protein n=1 Tax=D... [more]
A0A651HBQ93.390e-1126.94Uncharacterized protein n=1 Tax=Puniceicoccaceae b... [more]
W2RCK89.480e-1126.82Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008775Phytanoyl-CoA dioxygenasePFAMPF05721PhyHcoord: 13..230
e-value: 3.0E-4
score: 21.1
NoneNo IPR availableGENE3D2.60.120.620q2cbj1_9rhob like domaincoord: 2..258
e-value: 7.6E-19
score: 69.8
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 2..239

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:757152..758169 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8450.t1Ggra8450.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 757152..758169 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8450.t1 ID=Ggra8450.t1|Name=Ggra8450.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=268bp
MQLTDDHKRRFIRDGYVQLPRVVPRAEVAALLAVTDRMYASKQYTLHDSN
KDILPHFAAACEQHATLTSLPRRTPMLSLCEQLLGAGNVALPARAQIAYR
PYDQRLARSGMSPADAICRHWYHVDGGDGKYARTASPFTLLVGVCLSAGQ
TVDDNRGQLNVWPASHVTLHQVLKQRIQAGLITGRNLFGVAKEKPDIGPA
KRVLMDVGDVVLAHHRLGHSGGVNLHHHVRKNLYYRVTHKRHDQLLPAVW
SASLWTEYDGLRHLVQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008775Phytyl_CoA_dOase