Ggra8445.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8445.t1
Unique NameGgra8445.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length414
Homology
BLAST of Ggra8445.t1 vs. uniprot
Match: A0A2V3IFB0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFB0_9FLOR)

HSP 1 Score: 355 bits (910), Expect = 1.500e-116
Identity = 208/419 (49.64%), Postives = 272/419 (64.92%), Query Frame = 0
Query:    1 MANNNASFIAPLTTFLPSTSTKATPTSLRTPTYHVRVLPSRSTR--VSPSCAWEQQLLPDESSAQKLHNLHTASTTTITTLAPHTVTDSHLYSADHNSDLAIALPFDSRDERNLLLDTLSLTHFLPPQSPIPPRSAAIITASVPSSLRAFLGLDSSACNTLAAHILSDGRVNRAVALRQTLITCGVKCLACVVSEAEGMGDTLPVEAVAFLTWMDGDRQVMEVQLSAAVAVALAAVCETPCYVKRTLVQAAGVAVRDIMDPDLVY----EQPSTPATQQTEPRLEASRLLADDVLNMSQQALLQTVRRCGIGARSDDSREQLFKRLLPNMCEVQRREVAIELAAEQGRFDLAAELQKKRSQRGELFARMRDMERSGKLSEAVSIAERLRERAADMQDVSLEPGTYDKFLDRDEWYRPTR 413
            M  +++ FIAP TT LP      TP+ L   T+  R  PSR+ R  V  + +W+ Q+ PD+     L +L T STT  TT++ HTVT +HL++ D  SD A+ LP  S  +RNLLLDTLSLTHF+ PQ+P PPRSAA+IT+ VPS LR FLGLD++ CN LA  ++  GRVNRA  LR+TL  CGV CLA VV EA  +G    ++   FL W D    VM++ +SA VAVALAA+ + PCYV+R ++  A   V  I   +       EQP    T    P + A  LLADDVLN+ Q  LL  +R+CGI ARSD  REQL + LL  MCEVQRRE+ I +AAE+GR+D AA+LQ +RS RG L++ MR +E+ G  ++A+ +AERLR    ++ DV+ +PGTYD+ LDRDEWYRP R
Sbjct:    1 MPPHSSYFIAPFTTALP------TPSPLNKCTH--RTTPSRTPRKPVPITSSWKDQVFPDQPPKALLRHLQT-STTANTTVSLHTVTKTHLHAIDTTSDQALPLPLQSEQQRNLLLDTLSLTHFIEPQTPAPPRSAALITSVVPSPLRQFLGLDAATCNQLAQLVVRRGRVNRATVLRETLRACGVNCLATVVREAPTLGQDFTLDGALFLAWADDHNDVMQLDVSAPVAVALAALSKAPCYVRRDIIHKAAHPVHSIEQVETATHQSEEQPEL--TPSETPAINAWELLADDVLNLKQPQLLYLLRQCGISARSDQPREQLLRALLDEMCEVQRRELLIAIAAERGRYDWAAQLQAQRSDRGRLWSEMRRLEKEGCYTDALQLAERLRRLEDNLHDVTQDPGTYDRDLDRDEWYRPVR 408          
BLAST of Ggra8445.t1 vs. uniprot
Match: A0A7S0BU30 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BU30_9RHOD)

HSP 1 Score: 70.1 bits (170), Expect = 1.670e-9
Identity = 43/132 (32.58%), Postives = 77/132 (58.33%), Query Frame = 0
Query:  283 LLADDVLNMSQQALLQTVRRCGIGARSDDSREQLFKRLLPNMCEVQRREVAIELAAEQGRFDLAAELQKKRSQRGELFARMRDMERSGKLSEAVSIAERLRERAADMQ-DVSLEPGTYDKFLDRDEWYRPTR 413
            L  D++L MS   L   +R  GI +++  +R +L  RL+P + E  RR + I+ A ++  +  A+ELQ  +S+R  +  ++ +     +  +A  + ER  +R  +M+ D + E G+YD++LD+DEWY+P R
Sbjct:  251 LTNDEILGMSAPQLRTALRSAGIPSKTRSTRGELLTRLIPMIDESVRRAMLIDEAVQREDYGRASELQAGQSERSRVKQQLEEAVAEERYLDAQKLQERF-DRLTEMRADPTQEEGSYDRYLDQDEWYKPVR 381          
BLAST of Ggra8445.t1 vs. uniprot
Match: L1JGK2 (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JGK2_GUITC)

HSP 1 Score: 68.2 bits (165), Expect = 7.620e-9
Identity = 61/224 (27.23%), Postives = 106/224 (47.32%), Query Frame = 0
Query:  212 MDGDRQVMEVQLSAAVAVALAAVCETPCYVKRTLVQAAGVAVRDIMDP------DLVYEQP---STPATQQ------------TEPRLEASR-----LLADDVLNMSQQALLQTVRRCGIGARSDDSREQLFKRLLPNMCEVQRREVAIELAAEQGRFDLAAELQKKRSQRGELFARMRDMERSGKLSEAVSIAERLRERAADMQDVSLEPGTYDKFLDRDEWY 409
            ++G  Q M +  S A +VA A    +P Y+++ + +     + ++ D        +   QP    TP T +             + R EA R     + A D+L MS + L   +   G+ + S  ++E+L   +LP M EV+RR V I+ A E+  +  A++L   +S+RG + A + +  R  +  EA  + E L        D++ + G+YD +LD D+WY
Sbjct:  164 LEGTDQPMRMVASPAASVAFATKFGSPVYIRKDIYKETCCRIVNLGDEGERNKFSIDGSQPVAWRTPKTAEKFMFRVRESQKNAKIREEALRKKTWEMKASDLLAMSVEQLRFILAEQGVPSSSKATKEELEDLVLPGMDEVERRIVMIQRAVEREDYGTASQLAANQSRRGRIAAAIVEAVREERYYEAAELQEELEVITMGRADITQDEGSYDPYLDADDWY 387          
BLAST of Ggra8445.t1 vs. uniprot
Match: A0A7S2ZQZ0 (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZQZ0_9RHOD)

HSP 1 Score: 67.4 bits (163), Expect = 1.320e-8
Identity = 40/129 (31.01%), Postives = 75/129 (58.14%), Query Frame = 0
Query:  286 DDVLNMSQQALLQTVRRCGIGARSDDSREQLFKRLLPNMCEVQRREVAIELAAEQGRFDLAAELQKKRSQRGELFARMRDMERSGKLSEAVSIAERLRERAADMQ-DVSLEPGTYDKFLDRDEWYRPTR 413
            D++  MS   L   +R  GI +++  +R +L  RL+P + E +RR + I+ A  +  +  A+ELQ  +S+R  +  ++ +     +  +A  + ER  +R  +M+ D + + G+YD++LD+DEWY+P R
Sbjct:  264 DEIRRMSVPELRTALRSAGIPSKTRSTRGELLNRLIPMIDESERRSMLIDEAVRREDYGRASELQAGQSERSRVKQQLEEAVAEERYLDAQKLQERF-DRLTEMRADPTQDEGSYDRYLDQDEWYKPVR 391          
The following BLAST results are available for this feature:
BLAST of Ggra8445.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IFB01.500e-11649.64Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S0BU301.670e-932.58Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
L1JGK27.620e-927.23Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A7S2ZQZ01.320e-831.01Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..413

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:735561..736802 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8445.t1Ggra8445.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 735561..736802 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8445.t1 ID=Ggra8445.t1|Name=Ggra8445.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=414bp
MANNNASFIAPLTTFLPSTSTKATPTSLRTPTYHVRVLPSRSTRVSPSCA
WEQQLLPDESSAQKLHNLHTASTTTITTLAPHTVTDSHLYSADHNSDLAI
ALPFDSRDERNLLLDTLSLTHFLPPQSPIPPRSAAIITASVPSSLRAFLG
LDSSACNTLAAHILSDGRVNRAVALRQTLITCGVKCLACVVSEAEGMGDT
LPVEAVAFLTWMDGDRQVMEVQLSAAVAVALAAVCETPCYVKRTLVQAAG
VAVRDIMDPDLVYEQPSTPATQQTEPRLEASRLLADDVLNMSQQALLQTV
RRCGIGARSDDSREQLFKRLLPNMCEVQRREVAIELAAEQGRFDLAAELQ
KKRSQRGELFARMRDMERSGKLSEAVSIAERLRERAADMQDVSLEPGTYD
KFLDRDEWYRPTR*
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