Ggra8442.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8442.t1
Unique NameGgra8442.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length315
Homology
BLAST of Ggra8442.t1 vs. uniprot
Match: A0A2V3II45 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II45_9FLOR)

HSP 1 Score: 428 bits (1100), Expect = 2.730e-148
Identity = 214/297 (72.05%), Postives = 250/297 (84.18%), Query Frame = 0
Query:   20 HAASISSSEN--HTKLGPYGKTNREEMKGNSVSHASFTNPPAFPKAPPVQADADESLRAHLNSLSHEQLLQRCMLNEMRLRQWEQASSSFVSALALTPEMTEAFYARSLRELLSSALQTLDVVDELRHVECSMPCVKGEAPQISLTLWRDLAYSEWHVQWSPASWWVSVSAVGYRWGLSFNCLTKVTGIYLNGMIRCSFSKDMTGLRIGFPQKPILDMTVESSVGWGAVPIPVREQIENLVRSEIELFVQNRLTGANDMVVVLKRKAEKMLTESDLQEARSQAERASAVNLRAATFL 314
            H+  ++SS +    K  P+G  +   MK  S    S++NP  FPK PP  A+ D+ LRAHL +LSHE+LL+RC+ NEMRL QWE+A+SS V++L LTPEMTEAFYARSLRELLSSAL TLDV++ELRHVECSMPCVKGEAP+ISL +WR L+YSEWHV+WSPASWWVSVSAVGYRWGLSFNCLT VTGI L+G+IRCSFS DMT LRIGFPQKP+L+MTVESSVGWGAVPIPVREQIE+LVRSEIE FV+NRLTG+NDMVVVLK K E+ L++SDL EAR QAERAS VN+R+ TFL
Sbjct:   21 HSTKLASSPSGYQGKSIPHGTQSDVTMKRTSAPGPSYSNPLPFPKEPPETAEDDKPLRAHLKTLSHEELLERCLSNEMRLMQWEKAASSLVTSLTLTPEMTEAFYARSLRELLSSALDTLDVIEELRHVECSMPCVKGEAPRISLVMWRGLSYSEWHVEWSPASWWVSVSAVGYRWGLSFNCLTNVTGIQLDGIIRCSFSNDMTALRIGFPQKPMLNMTVESSVGWGAVPIPVREQIEDLVRSEIEHFVENRLTGSNDMVVVLKTKMEEKLSDSDLNEARRQAERASNVNIRSLTFL 317          
BLAST of Ggra8442.t1 vs. uniprot
Match: A0A8J5XFS8 (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XFS8_DIALT)

HSP 1 Score: 105 bits (261), Expect = 3.580e-22
Identity = 70/209 (33.49%), Postives = 105/209 (50.24%), Query Frame = 0
Query:   65 PVQADADESLRAHLNSLSHEQLLQRCMLNEM--RLRQWEQASSSFVSALALTPEMTEAFYARSLRELLSSALQTLDVVDELRHVECSMPCVKGEAPQISLTLWRDLAYSEWHVQWSPASWWVSVSAVGYRWGLSFNCLTKVTGIYLNGMIRCSFSKDMT--GLRIGFPQKPILDMTVESSVGWGAVPIPVREQIENLVRSEIE-LFVQN 268
            P  AD  E LRA L    H       ML E   +L +W+      +      PE  +  Y      + ++AL  L  V  ++HV CS P ++ EAP + L  +  L  SEW + W+P SW V V   GY + L F    +++ + L G +R  F   +   G+R+ F +KP L M +ES+V  G VP+PV++QI ++VR  ++   VQN
Sbjct:  101 PGAADEVERLRAELAQAQH-------MLREANGKLGEWQALVEEALHTALFNPEANDR-YRMHASHMCTAALVALPQVTRVKHVRCSFPSLRREAPTVRLARYTSLESSEWQLSWAP-SWSVDVCVEGYHY-LYFELTMRISRVSLTGRVRAHFPTPLGAGGVRLAFVRKPKLAMDLESTVSLGLVPVPVQDQIADIVRELMDDWLVQN 299          
The following BLAST results are available for this feature:
BLAST of Ggra8442.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3II452.730e-14872.05Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A8J5XFS83.580e-2233.49Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..34

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:724461..725405 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8442.t1Ggra8442.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 724461..725405 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8442.t1 ID=Ggra8442.t1|Name=Ggra8442.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=315bp
MELRAGIGSLGTADSIRPPHAASISSSENHTKLGPYGKTNREEMKGNSVS
HASFTNPPAFPKAPPVQADADESLRAHLNSLSHEQLLQRCMLNEMRLRQW
EQASSSFVSALALTPEMTEAFYARSLRELLSSALQTLDVVDELRHVECSM
PCVKGEAPQISLTLWRDLAYSEWHVQWSPASWWVSVSAVGYRWGLSFNCL
TKVTGIYLNGMIRCSFSKDMTGLRIGFPQKPILDMTVESSVGWGAVPIPV
REQIENLVRSEIELFVQNRLTGANDMVVVLKRKAEKMLTESDLQEARSQA
ERASAVNLRAATFL*
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