Ggra8442.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8442.t1
Unique NameGgra8442.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length315
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:724461..725405 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8442Ggra8442Gracilaria gracilis GNS1m malegenetig00000041_pilon 724461..725405 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8442.t1.start1Ggra8442.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000041_pilon 724461..724463 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8442.t1.CDS1Ggra8442.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000041_pilon 724461..725405 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8442.t1.exon1Ggra8442.t1.exon1Gracilaria gracilis GNS1m maleexontig00000041_pilon 724461..725405 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8442.t1.stop1Ggra8442.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000041_pilon 725403..725405 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8442.t1Ggra8442.t1Gracilaria gracilis GNS1m malepolypeptidetig00000041_pilon 724461..725405 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8442.t1 ID=Ggra8442.t1|Name=Ggra8442.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=315bp
MELRAGIGSLGTADSIRPPHAASISSSENHTKLGPYGKTNREEMKGNSVS
HASFTNPPAFPKAPPVQADADESLRAHLNSLSHEQLLQRCMLNEMRLRQW
EQASSSFVSALALTPEMTEAFYARSLRELLSSALQTLDVVDELRHVECSM
PCVKGEAPQISLTLWRDLAYSEWHVQWSPASWWVSVSAVGYRWGLSFNCL
TKVTGIYLNGMIRCSFSKDMTGLRIGFPQKPILDMTVESSVGWGAVPIPV
REQIENLVRSEIELFVQNRLTGANDMVVVLKRKAEKMLTESDLQEARSQA
ERASAVNLRAATFL*
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spliced messenger RNA

>Ggra8442.t1 ID=Ggra8442.t1|Name=Ggra8442.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=945bp|location=Sequence derived from alignment at tig00000041_pilon:724461..725405+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGAATTGCGCGCAGGGATAGGTTCCCTTGGTACTGCTGATAGCATTCG
TCCGCCTCACGCGGCTTCCATCAGTTCGTCAGAGAATCATACAAAACTCG
GTCCGTATGGAAAGACTAACCGTGAGGAGATGAAGGGGAACTCTGTTTCG
CATGCCTCATTCACGAACCCCCCAGCATTTCCAAAAGCGCCACCCGTCCA
AGCAGACGCTGATGAAAGCTTACGCGCACATCTCAATTCTCTCTCGCATG
AGCAACTGTTGCAACGATGCATGTTGAATGAAATGCGATTAAGGCAATGG
GAACAGGCGTCATCTTCATTCGTTTCGGCACTGGCACTCACTCCGGAAAT
GACAGAAGCATTCTACGCTCGTTCACTTCGCGAATTACTTTCTTCCGCCT
TGCAAACGCTAGATGTCGTGGATGAATTACGTCATGTTGAATGCTCTATG
CCATGCGTCAAGGGTGAAGCACCTCAAATTTCGCTGACGTTGTGGCGTGA
TTTGGCTTATTCAGAGTGGCACGTCCAGTGGTCCCCGGCTAGTTGGTGGG
TTTCAGTTTCCGCCGTTGGTTACAGATGGGGACTCAGCTTCAACTGCCTC
ACAAAGGTTACGGGTATCTACCTCAATGGGATGATTCGTTGTTCGTTTTC
GAAGGATATGACGGGTCTCAGGATTGGCTTTCCGCAAAAACCAATCCTTG
ACATGACTGTCGAGAGCAGCGTTGGTTGGGGTGCAGTTCCCATTCCGGTC
AGGGAGCAAATAGAAAACCTAGTTCGTTCTGAAATAGAACTGTTCGTACA
GAACAGACTCACTGGCGCCAACGACATGGTAGTTGTTCTCAAAAGGAAAG
CGGAAAAGATGCTGACGGAGAGTGATTTGCAGGAGGCTAGGTCACAAGCG
GAGCGAGCCTCTGCCGTTAACCTTCGAGCAGCTACGTTTCTCTAA
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protein sequence of Ggra8442.t1

>Ggra8442.t1 ID=Ggra8442.t1|Name=Ggra8442.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=315bp
MELRAGIGSLGTADSIRPPHAASISSSENHTKLGPYGKTNREEMKGNSVS
HASFTNPPAFPKAPPVQADADESLRAHLNSLSHEQLLQRCMLNEMRLRQW
EQASSSFVSALALTPEMTEAFYARSLRELLSSALQTLDVVDELRHVECSM
PCVKGEAPQISLTLWRDLAYSEWHVQWSPASWWVSVSAVGYRWGLSFNCL
TKVTGIYLNGMIRCSFSKDMTGLRIGFPQKPILDMTVESSVGWGAVPIPV
REQIENLVRSEIELFVQNRLTGANDMVVVLKRKAEKMLTESDLQEARSQA
ERASAVNLRAATFL*
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mRNA from alignment at tig00000041_pilon:724461..725405+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8442.t1 ID=Ggra8442.t1|Name=Ggra8442.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=945bp|location=Sequence derived from alignment at tig00000041_pilon:724461..725405+ (Gracilaria gracilis GNS1m male)
ATGGAATTGCGCGCAGGGATAGGTTCCCTTGGTACTGCTGATAGCATTCG
TCCGCCTCACGCGGCTTCCATCAGTTCGTCAGAGAATCATACAAAACTCG
GTCCGTATGGAAAGACTAACCGTGAGGAGATGAAGGGGAACTCTGTTTCG
CATGCCTCATTCACGAACCCCCCAGCATTTCCAAAAGCGCCACCCGTCCA
AGCAGACGCTGATGAAAGCTTACGCGCACATCTCAATTCTCTCTCGCATG
AGCAACTGTTGCAACGATGCATGTTGAATGAAATGCGATTAAGGCAATGG
GAACAGGCGTCATCTTCATTCGTTTCGGCACTGGCACTCACTCCGGAAAT
GACAGAAGCATTCTACGCTCGTTCACTTCGCGAATTACTTTCTTCCGCCT
TGCAAACGCTAGATGTCGTGGATGAATTACGTCATGTTGAATGCTCTATG
CCATGCGTCAAGGGTGAAGCACCTCAAATTTCGCTGACGTTGTGGCGTGA
TTTGGCTTATTCAGAGTGGCACGTCCAGTGGTCCCCGGCTAGTTGGTGGG
TTTCAGTTTCCGCCGTTGGTTACAGATGGGGACTCAGCTTCAACTGCCTC
ACAAAGGTTACGGGTATCTACCTCAATGGGATGATTCGTTGTTCGTTTTC
GAAGGATATGACGGGTCTCAGGATTGGCTTTCCGCAAAAACCAATCCTTG
ACATGACTGTCGAGAGCAGCGTTGGTTGGGGTGCAGTTCCCATTCCGGTC
AGGGAGCAAATAGAAAACCTAGTTCGTTCTGAAATAGAACTGTTCGTACA
GAACAGACTCACTGGCGCCAACGACATGGTAGTTGTTCTCAAAAGGAAAG
CGGAAAAGATGCTGACGGAGAGTGATTTGCAGGAGGCTAGGTCACAAGCG
GAGCGAGCCTCTGCCGTTAACCTTCGAGCAGCTACGTTTCTCTAA
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Coding sequence (CDS) from alignment at tig00000041_pilon:724461..725405+

>Ggra8442.t1 ID=Ggra8442.t1|Name=Ggra8442.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=945bp|location=Sequence derived from alignment at tig00000041_pilon:724461..725405+ (Gracilaria gracilis GNS1m male)
ATGGAATTGCGCGCAGGGATAGGTTCCCTTGGTACTGCTGATAGCATTCG
TCCGCCTCACGCGGCTTCCATCAGTTCGTCAGAGAATCATACAAAACTCG
GTCCGTATGGAAAGACTAACCGTGAGGAGATGAAGGGGAACTCTGTTTCG
CATGCCTCATTCACGAACCCCCCAGCATTTCCAAAAGCGCCACCCGTCCA
AGCAGACGCTGATGAAAGCTTACGCGCACATCTCAATTCTCTCTCGCATG
AGCAACTGTTGCAACGATGCATGTTGAATGAAATGCGATTAAGGCAATGG
GAACAGGCGTCATCTTCATTCGTTTCGGCACTGGCACTCACTCCGGAAAT
GACAGAAGCATTCTACGCTCGTTCACTTCGCGAATTACTTTCTTCCGCCT
TGCAAACGCTAGATGTCGTGGATGAATTACGTCATGTTGAATGCTCTATG
CCATGCGTCAAGGGTGAAGCACCTCAAATTTCGCTGACGTTGTGGCGTGA
TTTGGCTTATTCAGAGTGGCACGTCCAGTGGTCCCCGGCTAGTTGGTGGG
TTTCAGTTTCCGCCGTTGGTTACAGATGGGGACTCAGCTTCAACTGCCTC
ACAAAGGTTACGGGTATCTACCTCAATGGGATGATTCGTTGTTCGTTTTC
GAAGGATATGACGGGTCTCAGGATTGGCTTTCCGCAAAAACCAATCCTTG
ACATGACTGTCGAGAGCAGCGTTGGTTGGGGTGCAGTTCCCATTCCGGTC
AGGGAGCAAATAGAAAACCTAGTTCGTTCTGAAATAGAACTGTTCGTACA
GAACAGACTCACTGGCGCCAACGACATGGTAGTTGTTCTCAAAAGGAAAG
CGGAAAAGATGCTGACGGAGAGTGATTTGCAGGAGGCTAGGTCACAAGCG
GAGCGAGCCTCTGCCGTTAACCTTCGAGCAGCTACGTTTCTCTAA
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