Ggra8439.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8439.t1
Unique NameGgra8439.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length142
Homology
BLAST of Ggra8439.t1 vs. uniprot
Match: A0A2V3II92 (FUN14 domain-containing protein 2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II92_9FLOR)

HSP 1 Score: 210 bits (535), Expect = 1.050e-67
Identity = 109/141 (77.30%), Postives = 121/141 (85.82%), Query Frame = 0
Query:    1 MSRFLLCFQPVGAPPVAALCARTRTRARRFLLTADASDFIRNTLTSATTNQLTVGSVLGFATGYATKRVGQLLLVLIGCELIALQLMAQRAWIVVNWQLIAADLSPHVERDRFDRIMEAIKLKMPFAGSFTASFYAGFRWT 141
            MSR +LCFQP  A     +C R      + +L+ADAS+F RNTL SAT NQLTVGSVLGFATGYATKRVGQLLLVLIGCEL+ALQLMAQR+WIVVNWQLI+ DLSPHVE+DRFDR+MEAIKLKMPFAG+FTASFYAGFRWT
Sbjct:   15 MSRLVLCFQPPAAAHSPRICRRAARP--KPVLSADASEFFRNTLASATANQLTVGSVLGFATGYATKRVGQLLLVLIGCELVALQLMAQRSWIVVNWQLISRDLSPHVEQDRFDRVMEAIKLKMPFAGAFTASFYAGFRWT 153          
BLAST of Ggra8439.t1 vs. uniprot
Match: R7QJE0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJE0_CHOCR)

HSP 1 Score: 124 bits (311), Expect = 9.440e-34
Identity = 66/137 (48.18%), Postives = 93/137 (67.88%), Query Frame = 0
Query:   13 APPVAALCARTRTRARRFLLT--------ADASDFIRNTLTSATTNQLTVGSVLGFATGYATKRVGQLLLVLIGCELIALQLMAQRAWIVVNWQLIAADLSPHVERDRFDRIMEAIKLKMPFAGSFTASFYAGFRWT 141
            APP + L  R  T  RR  ++        A  S  +R TL SAT +QL +GS+LGFA GY+ KRVGQLLLV+ G +++A+QLMA+R W+VV+W  +A DL+P ++ DR D +++ +K ++PFAG+  A  YAGFRWT
Sbjct:   10 APPPSRLPLRLATSPRRLRVSRPLCDTSAAHLSHTLRATLQSATGSQLGMGSLLGFAIGYSAKRVGQLLLVIAGMQIVAVQLMARRQWLVVDWDRVAEDLAPRIKSDRVDWMLDVVKFRVPFAGALVAGCYAGFRWT 146          
BLAST of Ggra8439.t1 vs. uniprot
Match: FUN14 domain-containing protein 2-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDDE3 (FUN14 domain-containing protein 2-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDDE3)

HSP 1 Score: 119 bits (297), Expect = 1.660e-31
Identity = 54/91 (59.34%), Postives = 74/91 (81.32%), Query Frame = 0
Query:   51 QLTVGSVLGFATGYATKRVGQLLLVLIGCELIALQLMAQRAWIVVNWQLIAADLSPHVERDRFDRIMEAIKLKMPFAGSFTASFYAGFRWT 141
            QL++GS+LGFATGYA KR+GQLLLV +G E++ LQLMA++ W+ VNW++I  DL+ HVE+D F+R++E  + K+PF G+FTA  YAG RWT
Sbjct:   66 QLSLGSILGFATGYACKRIGQLLLVFVGIEVVTLQLMARKGWVRVNWRVIERDLALHVEQDGFERVLEEFRYKIPFTGAFTAGMYAGVRWT 156          
BLAST of Ggra8439.t1 vs. uniprot
Match: A0A5J4YML3 (FUN14 domain-containing protein 2 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YML3_PORPP)

HSP 1 Score: 95.9 bits (237), Expect = 5.240e-22
Identity = 42/90 (46.67%), Postives = 68/90 (75.56%), Query Frame = 0
Query:   51 QLTVGSVLGFATGYATKRVGQLLLVLIGCELIALQLMAQRAWIVVNWQLIAADLSPHVERDRFDRIMEAIKLKMPFAGSFTASFYAGFRW 140
            Q++VG +LG+ATGY+ +R+G+L+L ++G E+I LQ M+ R W+ V+W+ +A+DL P VER  F++I E +  ++PFA SF+A  YAG ++
Sbjct:  106 QVSVGMLLGYATGYSLRRIGKLVLGIVGTEIILLQYMSYRGWVSVDWRAVASDLKPSVERSTFEKIFEVLTYRLPFAASFSAGMYAGLKY 195          
BLAST of Ggra8439.t1 vs. uniprot
Match: A0A7S0BST7 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BST7_9RHOD)

HSP 1 Score: 91.7 bits (226), Expect = 1.100e-20
Identity = 44/91 (48.35%), Postives = 66/91 (72.53%), Query Frame = 0
Query:   51 QLTVGSVLGFATGYATKRVGQLLLVLIGCELIALQLMAQRAWIVVNWQLIAADLSPHVERDRFDRIMEAIKLKMPFAGSFTASFYAGFRWT 141
            QLTVGS+LGFATG++ KR+G++LL ++G +++ LQ  + R W+ V+WQ  A D+SP +ER R   ++ A+  +MPFA SFTA  Y G ++T
Sbjct:   75 QLTVGSLLGFATGFSIKRIGKMLLFVLGSQVLFLQYCSYRKWVDVHWQKFADDISPALERKRLAGLLNALASRMPFATSFTAGVYTGIKYT 165          
BLAST of Ggra8439.t1 vs. uniprot
Match: A0A2V3IN71 (FUN14 domain-containing protein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IN71_9FLOR)

HSP 1 Score: 85.5 bits (210), Expect = 3.430e-18
Identity = 38/89 (42.70%), Postives = 63/89 (70.79%), Query Frame = 0
Query:   51 QLTVGSVLGFATGYATKRVGQLLLVLIGCELIALQLMAQRAWIVVNWQLIAADLSPHVERDRFDRIMEAIKLKMPFAGSFTASFYAGFR 139
            Q++ G+VLGFATGY+ +++G+L+L+++G E++ LQ MA R W+V++W+ I  DLSP   R  +D ++  +  KMPF+ +F+    AG R
Sbjct:   84 QVSFGAVLGFATGYSIRKIGKLILLVVGTEVVVLQYMAYRQWLVMDWRRIGRDLSPKFNRSMWDGLLNVLLYKMPFSAAFSGGLAAGLR 172          
BLAST of Ggra8439.t1 vs. uniprot
Match: A0A7S0T5G4 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T5G4_9RHOD)

HSP 1 Score: 84.7 bits (208), Expect = 4.570e-18
Identity = 41/91 (45.05%), Postives = 63/91 (69.23%), Query Frame = 0
Query:   51 QLTVGSVLGFATGYATKRVGQLLLVLIGCELIALQLMAQRAWIVVNWQLIAADLSPHVERDRFDRIMEAIKLKMPFAGSFTASFYAGFRWT 141
            Q+++G  LG+ATGYA KR+G+LLL ++G E+I LQ M+ R W+ ++W +I  DL P V    F ++ E +  ++PFA SF+A  YAG ++T
Sbjct:   68 QMSLGLGLGYATGYAVKRIGKLLLGVVGTEMIVLQYMSYRGWLDLHWNVIYHDLRPSVREHFFRQLFEVLTHRIPFAASFSAGLYAGVKYT 158          
BLAST of Ggra8439.t1 vs. uniprot
Match: A0A5J4YP66 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YP66_PORPP)

HSP 1 Score: 83.6 bits (205), Expect = 1.290e-16
Identity = 40/101 (39.60%), Postives = 65/101 (64.36%), Query Frame = 0
Query:   40 IRNTLTSATTNQLTVGSVLGFATGYATKRVGQLLLVLIGCELIALQLMAQRAWIVVNWQLIAADLSPHVERDRFDRIMEAIKLKMPFAGSFTASFYAGFRW 140
            I N   S    Q  +G +LG+A G++ +R+G++LL + G E++ LQ MA R W+ V+W  I +DL P V+   FDR++E +K ++PFA SF+A  + G ++
Sbjct:  180 IENLPASPVGKQAWMGMMLGYAAGFSVRRIGRILLGMAGTEIVLLQYMAYRGWVRVDWNAIMSDLMPIVDYHSFDRVIEVLKHRVPFAASFSAGLFTGLKY 280          
BLAST of Ggra8439.t1 vs. uniprot
Match: M2W1D0 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W1D0_GALSU)

HSP 1 Score: 77.8 bits (190), Expect = 1.130e-14
Identity = 38/89 (42.70%), Postives = 61/89 (68.54%), Query Frame = 0
Query:   51 QLTVGSVLGFATGYATKRVGQLLLVLIGCELIALQLMAQRAWIVVNWQLIAADLSPHVERDRFDRIMEAIKLKMPFAGSFTASFYAGFR 139
            QL+VG++LG ATGY+ +R+G+  L LIG E++ LQLMA + W+ ++W  ++ D+ P +++   + IM+ +  KMPF    TA+F AG R
Sbjct:  159 QLSVGTLLGLATGYSLRRIGRFALFLIGTEVLVLQLMAYKGWVTIHWNKLSRDIIPVLDKSAAESIMDILLYKMPF----TAAFCAGLR 243          
BLAST of Ggra8439.t1 vs. uniprot
Match: A0A1X6NVP9 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NVP9_PORUM)

HSP 1 Score: 75.9 bits (185), Expect = 3.410e-14
Identity = 37/89 (41.57%), Postives = 56/89 (62.92%), Query Frame = 0
Query:   51 QLTVGSVLGFATGYATKRVGQLLLVLIGCELIALQLMAQRAWIVVNWQLIAADLSPHVERDRFDRIMEAIKLKMPFAGSFTASFYAGFR 139
            Q++ G  LG ATG+  +++G+LL+V++G E++ LQ M+ R W  V W  +A DLSP ++  RF   +  +  KMPFA +FT   Y G R
Sbjct:  120 QVSFGCALGIATGFCLRKLGRLLMVVVGGEVLVLQYMSHRGWAHVGWDKMAKDLSPALDGSRFRSSIGLLAYKMPFASAFTGGVYIGLR 208          
The following BLAST results are available for this feature:
BLAST of Ggra8439.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3II921.050e-6777.30FUN14 domain-containing protein 2 n=1 Tax=Gracilar... [more]
R7QJE09.440e-3448.18Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
FUN14 domain-containing protein 2-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDDE31.660e-3159.34FUN14 domain-containing protein 2-like n=1 Tax=Mer... [more]
A0A5J4YML35.240e-2246.67FUN14 domain-containing protein 2 n=1 Tax=Porphyri... [more]
A0A7S0BST71.100e-2048.35Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A2V3IN713.430e-1842.70FUN14 domain-containing protein 1 n=1 Tax=Gracilar... [more]
A0A7S0T5G44.570e-1845.05Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A5J4YP661.290e-1639.60Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
M2W1D01.130e-1442.70Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A1X6NVP93.410e-1441.57Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007014FUN14PFAMPF04930FUN14coord: 52..138
e-value: 4.6E-18
score: 65.4
IPR007014FUN14PANTHERPTHR21346FUN14 DOMAIN CONTAININGcoord: 46..140
NoneNo IPR availablePANTHERPTHR21346:SF0RE45833Pcoord: 46..140
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..141
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:716718..717143 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8439.t1Ggra8439.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 716718..717143 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8439.t1 ID=Ggra8439.t1|Name=Ggra8439.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=142bp
MSRFLLCFQPVGAPPVAALCARTRTRARRFLLTADASDFIRNTLTSATTN
QLTVGSVLGFATGYATKRVGQLLLVLIGCELIALQLMAQRAWIVVNWQLI
AADLSPHVERDRFDRIMEAIKLKMPFAGSFTASFYAGFRWT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007014FUN14