Ggra8431.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8431.t1
Unique NameGgra8431.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length355
Homology
BLAST of Ggra8431.t1 vs. uniprot
Match: A0A2V3IFD1 (PH domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFD1_9FLOR)

HSP 1 Score: 337 bits (863), Expect = 3.210e-111
Identity = 176/261 (67.43%), Postives = 203/261 (77.78%), Query Frame = 0
Query:  101 QVSHADHLSSDIHTKFPSFTMDVDAPLPDITNQ----PSGVVDRNVAS--ISN-KPWEKSLDYGKIQHAPLESNASHXXXXXXXXAMDIPHRLTMRPGAAAARLDLQRCTIRVHKQLVNQMQTNSMKVQHHENRSTAAPRADDSLSRCKGELWLKSRFPMMGWKRRYGSIVDHAYFGPVLFLFKYDAQGNVALHNSLMIVLVDSRVRLGKNSTTKDNDYRCEFVLRTTKRRYTIAANHTMRRDYWLRNLESIQKHATTSYS 354
            Q+    H S+ +++KFPSFTMDVD PLPDITN+    P      + A+  +SN KPWEKSLDYGKI++A                 +DIP RLT+ PGAAAARLDLQRCTIRVHKQLV+Q++TNSMK          AP  D +LSRC+GELWLKSR PMMGWK+RYGSIVDHAYFGPVLFLFKYDA+GNVALH+S+MIVLVDS V LGKNSTTKD +YRCEF L+TTKRRYT+AANHTMRRDYWLRNLESIQ+HA+TSYS
Sbjct:  100 QLPDTPHTSAAVNSKFPSFTMDVDTPLPDITNREREAPVSTARTSAATQRLSNQKPWEKSLDYGKIENA---------VSIDDDEGLDIPDRLTIGPGAAAARLDLQRCTIRVHKQLVHQIKTNSMK----PTEPDPAPAPDQALSRCQGELWLKSRVPMMGWKKRYGSIVDHAYFGPVLFLFKYDAKGNVALHHSMMIVLVDSHVLLGKNSTTKDKEYRCEFALKTTKRRYTVAANHTMRRDYWLRNLESIQQHASTSYS 347          
BLAST of Ggra8431.t1 vs. uniprot
Match: R7QL40 (PH domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL40_CHOCR)

HSP 1 Score: 294 bits (753), Expect = 1.810e-95
Identity = 150/213 (70.42%), Postives = 169/213 (79.34%), Query Frame = 0
Query:  147 NKPWEKSLDYGKIQHAPLESNASHXXXXXXXXAMDIPHRLTMRPGAAAARLDLQRCTIRVHKQLVNQMQTNSMK------VQHHENRSTAAPRADDSLSRCKGELWLKSRFPMMGWKRRYGSIVDHAYFGPVLFLFKYDAQGNVALHNSLMIVLVDSRVRLGKNSTTKDNDYRCEFVLRTTKRRYTIAANHTMRRDYWLRNLESIQKHATTSY 353
            +KPW+K LD+  +  AP+   A            D+P RLTM PGAAAARLDLQRCTIRVH+QLV+Q++TNSMK          ENR T A    D LSRC+GELWLKSR PMMGWK+RYGSIVDHAYFGPVLFLFKYDA+GNVALH+S+MIVLVDS VRLGKNSTTKD DYRCEFVL+TTKRRY IAANHTMRRDYWLRNLESIQ+ A+T+Y
Sbjct:   79 DKPWDKKLDFASVAKAPV---ARGGDDEDDDAGFDVPDRLTMGPGAAAARLDLQRCTIRVHRQLVDQIKTNSMKPGTIDSYSSAENRGTVA----DELSRCQGELWLKSRVPMMGWKKRYGSIVDHAYFGPVLFLFKYDAKGNVALHHSMMIVLVDSHVRLGKNSTTKDKDYRCEFVLKTTKRRYLIAANHTMRRDYWLRNLESIQQQASTTY 284          
BLAST of Ggra8431.t1 vs. uniprot
Match: A0A7S3A4N4 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A4N4_9RHOD)

HSP 1 Score: 114 bits (284), Expect = 2.990e-26
Identity = 59/160 (36.88%), Postives = 96/160 (60.00%), Query Frame = 0
Query:  180 MDIPHRLTMRPGAAAARLDLQRCTIRVHKQLVNQMQTNSMKVQHHENRSTAAPRADDSLSRCKGELWLKSRFPMMGWKRRYGSIVDHAYFGPVLFLFKYDAQGNVALHNSLMIVLVDSRVRLGKNSTTKDNDYRCEFVLRTTKRRYTIAANHTMRRDYWL 339
            MD+P +L  +P A     DL+RC++R+ K L                 +  A + +  + R +GEL +K+ F    W+RRYGS+V+HAYFGPVLFLFKYD++GN+ + +S MI LVD  + +GK+        R E+ ++T++++Y +A +   +RD+W+
Sbjct:   65 MDLPQKLMGKPEATKQVHDLKRCSVRIGKDLREATLNRPSPGNDFPAAANMAAKREKEI-RVQGELNMKTGFIFKTWRRRYGSVVEHAYFGPVLFLFKYDSEGNIEVQHSDMIALVDCSITVGKDRKVGPGG-RYEWNIKTSRKKYRLAVSDAKKRDFWI 222          
BLAST of Ggra8431.t1 vs. uniprot
Match: A0A5J4YVX2 (PH domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVX2_PORPP)

HSP 1 Score: 108 bits (271), Expect = 2.380e-24
Identity = 66/193 (34.20%), Postives = 95/193 (49.22%), Query Frame = 0
Query:  152 KSLDYGKIQHAPLESNASHXXXXXXXXAMDIPHRLTMRPGAAAARLDLQRCTIRVHKQLVNQMQTNSMKVQHHENRSTAAPRADDSLSRCKGELWLKSRFPMMGWKRRYGSIVDHAYFGPVLFLFKYDAQGNVALHNSLMIVLVDSRVRLGKNSTTKDNDYRCEFVLRTTKRRYTIAANHTMRRDYWLRNLES 344
            K L  G  +HA      SH          DIP R T +PGA  A  D+  C+  +           + KV   E       R         G+L+++ +F    WK+R+ ++VDHAYFGPVLFLFKYD + ++    S MIVL +S  +L  +    D  YRC+F L+T KR+Y  + +  + R+YW+  L S
Sbjct:   64 KPLFQGDREHAKDHMAESH----------DIPVRFTQQPGAEQAMRDIAHCSGVI-----------AAKVNSGEELQNTCGR---------GDLFIRQKFFTTMWKKRFATVVDHAYFGPVLFLFKYDKKNHIVAKTSQMIVLQESDSKLADDVRGSDGVYRCQFTLKTGKRKYVFSTSDALGREYWIELLRS 226          
BLAST of Ggra8431.t1 vs. uniprot
Match: A0A7S3EJD9 (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EJD9_9RHOD)

HSP 1 Score: 91.3 bits (225), Expect = 3.220e-19
Identity = 43/97 (44.33%), Postives = 67/97 (69.07%), Query Frame = 0
Query:  243 GELWLKSRFPMMGWKRRYGSIVDHAYFGPVLFLFKYDAQGNVALHNSLMIVLVDSRVRLGKNSTTKDNDYRCEFVLRTTKRRYTIAANHTMRRDYWL 339
            GEL  K+ F     +RRYGS+V+HAYFGPVLFLFKYD++GN+ + +S MI LVD  + +GK+        R E+ ++T++++Y +A +   +RD+W+
Sbjct:    1 GELNKKTGFMFKTLRRRYGSVVEHAYFGPVLFLFKYDSEGNIEVQHSDMIALVDCSITVGKDRKVGPGG-RYEWNIKTSRKKYRLAVSDAKKRDFWI 96          
The following BLAST results are available for this feature:
BLAST of Ggra8431.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IFD13.210e-11167.43PH domain-containing protein n=1 Tax=Gracilariopsi... [more]
R7QL401.810e-9570.42PH domain-containing protein n=1 Tax=Chondrus cris... [more]
A0A7S3A4N42.990e-2636.88Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YVX22.380e-2434.20PH domain-containing protein n=1 Tax=Porphyridium ... [more]
A0A7S3EJD93.220e-1944.33Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001849Pleckstrin homology domainSMARTSM00233PH_updatecoord: 239..349
e-value: 2.3E-4
score: 30.5
IPR001849Pleckstrin homology domainPROSITEPS50003PH_DOMAINcoord: 238..347
score: 8.1032
IPR011993PH-like domain superfamilyGENE3D2.30.29.30coord: 234..353
e-value: 3.6E-8
score: 35.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..103
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..178
NoneNo IPR availableCDDcd00821PHcoord: 241..342
e-value: 8.31334E-5
score: 39.063
NoneNo IPR availableSUPERFAMILY50729PH domain-likecoord: 236..350
NoneNo IPR availableSUPERFAMILY101447Formin homology 2 domain (FH2 domain)coord: 90..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:608665..609729 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8431.t1Ggra8431.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 608665..609729 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8431.t1 ID=Ggra8431.t1|Name=Ggra8431.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=355bp
MPAPPPPPPPPPPPPLPLRGGAKRTLPPPPPPPSSSRPTLASRVAPPAVA
PPPPVTDVSMPTGLTSDTIPSLPPAPTLPSPPTSMRTALPPPPPPPPPPP
QVSHADHLSSDIHTKFPSFTMDVDAPLPDITNQPSGVVDRNVASISNKPW
EKSLDYGKIQHAPLESNASHHDDDDDDDAMDIPHRLTMRPGAAAARLDLQ
RCTIRVHKQLVNQMQTNSMKVQHHENRSTAAPRADDSLSRCKGELWLKSR
FPMMGWKRRYGSIVDHAYFGPVLFLFKYDAQGNVALHNSLMIVLVDSRVR
LGKNSTTKDNDYRCEFVLRTTKRRYTIAANHTMRRDYWLRNLESIQKHAT
TSYS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001849PH_domain
IPR011993PH-like_dom_sf