Ggra8431.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra8431.t1
Unique NameGgra8431.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length355
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:608665..609729 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8431Ggra8431Gracilaria gracilis GNS1m malegenetig00000041_pilon 608665..609729 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8431.t1.start1Ggra8431.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000041_pilon 608665..608667 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8431.t1.CDS1Ggra8431.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000041_pilon 608665..609729 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8431.t1.exon1Ggra8431.t1.exon1Gracilaria gracilis GNS1m maleexontig00000041_pilon 608665..609729 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8431.t1.stop1Ggra8431.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000041_pilon 609727..609729 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra8431.t1Ggra8431.t1Gracilaria gracilis GNS1m malepolypeptidetig00000041_pilon 608665..609729 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra8431.t1 ID=Ggra8431.t1|Name=Ggra8431.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=355bp
MPAPPPPPPPPPPPPLPLRGGAKRTLPPPPPPPSSSRPTLASRVAPPAVA
PPPPVTDVSMPTGLTSDTIPSLPPAPTLPSPPTSMRTALPPPPPPPPPPP
QVSHADHLSSDIHTKFPSFTMDVDAPLPDITNQPSGVVDRNVASISNKPW
EKSLDYGKIQHAPLESNASHHDDDDDDDAMDIPHRLTMRPGAAAARLDLQ
RCTIRVHKQLVNQMQTNSMKVQHHENRSTAAPRADDSLSRCKGELWLKSR
FPMMGWKRRYGSIVDHAYFGPVLFLFKYDAQGNVALHNSLMIVLVDSRVR
LGKNSTTKDNDYRCEFVLRTTKRRYTIAANHTMRRDYWLRNLESIQKHAT
TSYS*
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spliced messenger RNA

>Ggra8431.t1 ID=Ggra8431.t1|Name=Ggra8431.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1065bp|location=Sequence derived from alignment at tig00000041_pilon:608665..609729+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
atgccggcgccaccacccccaccgccgccgccgccgccgccgccgttgcc
gttgcgCGGCGGCGCCAAACGAACTTTGCCACCTCCCCCTCCGCCGCCTT
CCTCCTCGCGACCCACGCTTGCGTCGCGCGTTGCGCCTCCTGCCGTTGCG
CCGCCGCCCCCGGTCACTGATGTGTCCATGCCCACGGGACTCACGTCCGA
TACTATTCCTTCATTGCCACCGGCTCCTACTCTGCCGTCGCCTCCTACGT
CTATGCGCACCGCATTgcctccgccgccgccgccgccaccaccaccaccg
cAAGTGTCCCACGCAGACCATCTCTCTTCCGATATACACACAAAGTTCCC
CAGTTTCACCATGGATGTGGACGCGCCGTTGCCAGACATTACCAACCAAC
CCAGCGGCGTTGTGGATCGAAACGTTGCGTCAATTAGCAATAAACCATGG
GAGAAGTCCCTAGATTACGGCAAGATTCAACACGCTCCGCTGGAAAGCAA
TGCATCGCATCacgatgacgatgacgacgacgacgCTATGGATATTCCAC
ATCGACTCACCATGCGTCCGGGCGCCGCAGCCGCTCGATTGGACTTGCAG
AGATGTACTATTCGCGTGCATAAACAATTGGTGAACCAAATGCAAACAAA
TAGCATGAAGGTGCAACATCATGAAAACCGCAGCACAGCTGCGCCGCGCG
CGGATGACTCGCTGTCAAGATGTAAGGGCGAGCTGTGGCTGAAGAGCCGC
TTCCCAATGATGGGATGGAAGAGACGCTACGGCAGCATAGTGGACCATGC
GTATTTCGGTCCCGTTTTGTTCCTGTTCAAGTATGACGCGCAGGGCAATG
TGGCGTTACACAACAGTTTGATGATTGTGTTGGTGGATTCTCGCGTGCGA
CTGGGAAAGAATTCTACCACCAAGGATAATGATTACCGCTGCGAATTCGT
GCTGAGAACTACCAAGAGACGATATACGATTGCTGCCAATCATACGATGA
GACGTGATTATTGGTTGAGGAACTTGGAAAGTATTCAAAAACACGCCACC
ACTTCATACTCATGA
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protein sequence of Ggra8431.t1

>Ggra8431.t1 ID=Ggra8431.t1|Name=Ggra8431.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=355bp
MPAPPPPPPPPPPPPLPLRGGAKRTLPPPPPPPSSSRPTLASRVAPPAVA
PPPPVTDVSMPTGLTSDTIPSLPPAPTLPSPPTSMRTALPPPPPPPPPPP
QVSHADHLSSDIHTKFPSFTMDVDAPLPDITNQPSGVVDRNVASISNKPW
EKSLDYGKIQHAPLESNASHHDDDDDDDAMDIPHRLTMRPGAAAARLDLQ
RCTIRVHKQLVNQMQTNSMKVQHHENRSTAAPRADDSLSRCKGELWLKSR
FPMMGWKRRYGSIVDHAYFGPVLFLFKYDAQGNVALHNSLMIVLVDSRVR
LGKNSTTKDNDYRCEFVLRTTKRRYTIAANHTMRRDYWLRNLESIQKHAT
TSYS*
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mRNA from alignment at tig00000041_pilon:608665..609729+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra8431.t1 ID=Ggra8431.t1|Name=Ggra8431.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1065bp|location=Sequence derived from alignment at tig00000041_pilon:608665..609729+ (Gracilaria gracilis GNS1m male)
atgccggcgccaccacccccaccgccgccgccgccgccgccgccgttgcc
gttgcgCGGCGGCGCCAAACGAACTTTGCCACCTCCCCCTCCGCCGCCTT
CCTCCTCGCGACCCACGCTTGCGTCGCGCGTTGCGCCTCCTGCCGTTGCG
CCGCCGCCCCCGGTCACTGATGTGTCCATGCCCACGGGACTCACGTCCGA
TACTATTCCTTCATTGCCACCGGCTCCTACTCTGCCGTCGCCTCCTACGT
CTATGCGCACCGCATTgcctccgccgccgccgccgccaccaccaccaccg
cAAGTGTCCCACGCAGACCATCTCTCTTCCGATATACACACAAAGTTCCC
CAGTTTCACCATGGATGTGGACGCGCCGTTGCCAGACATTACCAACCAAC
CCAGCGGCGTTGTGGATCGAAACGTTGCGTCAATTAGCAATAAACCATGG
GAGAAGTCCCTAGATTACGGCAAGATTCAACACGCTCCGCTGGAAAGCAA
TGCATCGCATCacgatgacgatgacgacgacgacgCTATGGATATTCCAC
ATCGACTCACCATGCGTCCGGGCGCCGCAGCCGCTCGATTGGACTTGCAG
AGATGTACTATTCGCGTGCATAAACAATTGGTGAACCAAATGCAAACAAA
TAGCATGAAGGTGCAACATCATGAAAACCGCAGCACAGCTGCGCCGCGCG
CGGATGACTCGCTGTCAAGATGTAAGGGCGAGCTGTGGCTGAAGAGCCGC
TTCCCAATGATGGGATGGAAGAGACGCTACGGCAGCATAGTGGACCATGC
GTATTTCGGTCCCGTTTTGTTCCTGTTCAAGTATGACGCGCAGGGCAATG
TGGCGTTACACAACAGTTTGATGATTGTGTTGGTGGATTCTCGCGTGCGA
CTGGGAAAGAATTCTACCACCAAGGATAATGATTACCGCTGCGAATTCGT
GCTGAGAACTACCAAGAGACGATATACGATTGCTGCCAATCATACGATGA
GACGTGATTATTGGTTGAGGAACTTGGAAAGTATTCAAAAACACGCCACC
ACTTCATACTCATGA
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Coding sequence (CDS) from alignment at tig00000041_pilon:608665..609729+

>Ggra8431.t1 ID=Ggra8431.t1|Name=Ggra8431.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1065bp|location=Sequence derived from alignment at tig00000041_pilon:608665..609729+ (Gracilaria gracilis GNS1m male)
atgccggcgccaccacccccaccgccgccgccgccgccgccgccgttgcc
gttgcgCGGCGGCGCCAAACGAACTTTGCCACCTCCCCCTCCGCCGCCTT
CCTCCTCGCGACCCACGCTTGCGTCGCGCGTTGCGCCTCCTGCCGTTGCG
CCGCCGCCCCCGGTCACTGATGTGTCCATGCCCACGGGACTCACGTCCGA
TACTATTCCTTCATTGCCACCGGCTCCTACTCTGCCGTCGCCTCCTACGT
CTATGCGCACCGCATTgcctccgccgccgccgccgccaccaccaccaccg
cAAGTGTCCCACGCAGACCATCTCTCTTCCGATATACACACAAAGTTCCC
CAGTTTCACCATGGATGTGGACGCGCCGTTGCCAGACATTACCAACCAAC
CCAGCGGCGTTGTGGATCGAAACGTTGCGTCAATTAGCAATAAACCATGG
GAGAAGTCCCTAGATTACGGCAAGATTCAACACGCTCCGCTGGAAAGCAA
TGCATCGCATCacgatgacgatgacgacgacgacgCTATGGATATTCCAC
ATCGACTCACCATGCGTCCGGGCGCCGCAGCCGCTCGATTGGACTTGCAG
AGATGTACTATTCGCGTGCATAAACAATTGGTGAACCAAATGCAAACAAA
TAGCATGAAGGTGCAACATCATGAAAACCGCAGCACAGCTGCGCCGCGCG
CGGATGACTCGCTGTCAAGATGTAAGGGCGAGCTGTGGCTGAAGAGCCGC
TTCCCAATGATGGGATGGAAGAGACGCTACGGCAGCATAGTGGACCATGC
GTATTTCGGTCCCGTTTTGTTCCTGTTCAAGTATGACGCGCAGGGCAATG
TGGCGTTACACAACAGTTTGATGATTGTGTTGGTGGATTCTCGCGTGCGA
CTGGGAAAGAATTCTACCACCAAGGATAATGATTACCGCTGCGAATTCGT
GCTGAGAACTACCAAGAGACGATATACGATTGCTGCCAATCATACGATGA
GACGTGATTATTGGTTGAGGAACTTGGAAAGTATTCAAAAACACGCCACC
ACTTCATACTCATGA
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