Ggra8430.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8430.t1
Unique NameGgra8430.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length677
Homology
BLAST of Ggra8430.t1 vs. uniprot
Match: A0A2V3IFH1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFH1_9FLOR)

HSP 1 Score: 1084 bits (2804), Expect = 0.000e+0
Identity = 547/671 (81.52%), Postives = 591/671 (88.08%), Query Frame = 0
Query:    6 DDSPGVAPRRRWSRRQTQ-RSAPLSDHSSSASASD----------NPKSFG-AMSAVRRLLTGQDSSAKMRVARSVKHAPKAAPPPCTVCAENELARVTPEEQLLRLRQLSQRCAPDAVDRLEMVMHGDYHRLLRLFRIACDVQLIVGVHERQDSAMAHLYAERLNAMAITLYGRDITVSVVSNGAGALFVCRMHNIISLLWEGIQFDVTESDDTPIDLIMKAVIESSLDADLDDLQGILSSIRFARPAEEADAIDDLNAGGLDMPSLNLLRPEFFTTRVLCMMLKTDIYEQGFYRRYVHVDRLGTTFTAVREGETAMLTKINVLPDAMSRPVKNGEDIIGEDLFMTRRKGRKDKFRLSCSVSVNVWEEYETPEWFGYIHPPPNADAMRPANLQELRDRLEAYGVPDGLEVCRIVYHCLGHKSKNANVKVDTLSAARGYFMYMKNFMKHGTTGSATNHIIEGDELAVVYDGIAFRVSAPQTEIRHNSLFMSLLISDERERNGKNVPKRSIIRRMCSTSEVVLSLCREITYLNAEYDEDGGTLYSASAEEENLSEAWTTCVALYVCDGYGCLEGCFNCAIENRRGAIVDESSVFMNDVQVPVVFDKLYRKSTLAEELSAMSDSRGATYPGAFISGRDQCNERTYLAGERHVFVAGGLLRYLQRELRIDWGGR 664
            D S    PRRRWSR+  + +S   SD SSS +ASD          +P S    MSAVRRLLTGQDSS KMRV+R+VK   K  P PC VC ENE  +++P++QLL+LRQLSQR  PD+ DRLE V+ GDYHRLLRLF++ACDVQLI+G      S MAHL+AERLN M ITLYG+ +TV++VSNGAG LFVC +  IISLLWEGIQFDVTESDDTPIDLI+KAVIESSLDADLDDLQ ILSSIRFA PA+E DAIDDLNAGGLD+P LNLLR EF+TTRVLCMMLKTDIYEQGFYR+YVHVDRLGTTFTAVREGET+ LT INVLPDAMSRPVKNG DIIGEDLFM RRKGRKDKFRLSCSVSVNVWEEYETPEWFGYIHPPPNADAMRPANL ELRDRLEAYGVPDG+EVCRIVYHCLGHKSKNANVKVDTLSAARGYFMYMKNF+KHGTTGS+TNH+IEGDELAVVYDGIAFRVSAPQTEIRH SLFMS+LISDERERNGKN+PKRSIIRRMCSTSEVVLSLCR+ITYLNAEYDE+GGTLYSASAEEENLSEAWTTCVALYVCDGYGCLEGCFNCAIENRRGAIVDES+VFMNDVQVPVVFDKLYRKSTLAEELSAMSD+RGATYPGAFISGRDQCNERT+LAG RH    G L+ YL+RE  +  GGR
Sbjct:    5 DSSSSDPPRRRWSRKSPKLKSTRFSDPSSSTAASDIHPPSHHQRPSPSSTNNPMSAVRRLLTGQDSSTKMRVSRNVKQPVKQPPQPCAVCVENESRQLSPDQQLLQLRQLSQRTEPDSPDRLESVIKGDYHRLLRLFQVACDVQLIIGTPTNNASPMAHLHAERLNLMGITLYGQQVTVTLVSNGAGVLFVCHIDTIISLLWEGIQFDVTESDDTPIDLILKAVIESSLDADLDDLQAILSSIRFATPADEPDAIDDLNAGGLDVPGLNLLRAEFYTTRVLCMMLKTDIYEQGFYRKYVHVDRLGTTFTAVREGETSALTNINVLPDAMSRPVKNGSDIIGEDLFMIRRKGRKDKFRLSCSVSVNVWEEYETPEWFGYIHPPPNADAMRPANLDELRDRLEAYGVPDGMEVCRIVYHCLGHKSKNANVKVDTLSAARGYFMYMKNFLKHGTTGSSTNHVIEGDELAVVYDGIAFRVSAPQTEIRHRSLFMSMLISDERERNGKNIPKRSIIRRMCSTSEVVLSLCRDITYLNAEYDENGGTLYSASAEEENLSEAWTTCVALYVCDGYGCLEGCFNCAIENRRGAIVDESAVFMNDVQVPVVFDKLYRKSTLAEELSAMSDARGATYPGAFISGRDQCNERTFLAGRRHRMSGGSLMAYLEREAWL--GGR 673          
BLAST of Ggra8430.t1 vs. uniprot
Match: R7Q8Q2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8Q2_CHOCR)

HSP 1 Score: 832 bits (2150), Expect = 2.790e-297
Identity = 398/551 (72.23%), Postives = 477/551 (86.57%), Query Frame = 0
Query:  109 PDAVDRLEMVMHGDYHRLLRLFRIACDVQLIVGVHERQDSAMAHLYAERLNAMAITLYGRDITVSVVSNGAGALFVCRMHNIISLLWEGIQFDVTESDDTPIDLIMKAVIESSLDADLDDLQGILSSIRFARPAEEADAIDDLNAGGLDMPSLNLLRPEFFTTRVLCMMLKTDIYEQGFYRRYVHVDRLGTTFTAVREGETAMLTKINVLPDAMSRPVKNGEDIIGEDLFMTRRKGRKDKFRLSCSVSVNVWEEYETPEWFGYIHPPPNADAMRPANLQELRDRLEAYGVPDGLEVCRIVYHCLGHKSKNANVKVDTLSAARGYFMYMKNFMKHGTTGSATNHIIEGDELAVVYDGIAFRVSAPQTEIRHNSLFMSLLISDERERNGKNVPKRSIIRRMCSTSEVVLSLCREITYLNAEYDEDGGTLYSASAEEENLSEAWTTCVALYVCDGYGCLEGCFNCAIENRRGAIVDESSVFMNDVQVPVVFDKLYRKSTLAEELSAMSDSRGATYPGAFISGRDQCNERTYLAGERHVFVAGGLLRYLQRELRI 659
            PD VDRL+    GDY   LRLF+IACDVQ IVGV +  +S M HL AERL AM ++LYG   TV++VSNGAG LFV +  ++ SL++EG+QFD+   +D P+DLI+KAV+E+S + D+DDL+ ILSSI+F    +E D I D+N+GGLD+P + L R EF+T+RVL MM+KTDIYEQGFY++YVH DRLGTTFTAVREGETA LTKINVLPDA+SRPVK   DIIGEDLFM RRKGRKD+FRLSC+VSVN+WEEYE+PEWFGYIHPPPNADA+RPA+L +L++RLEAYGVPDG EVCR+V+HCL HKS+N+NVKVDTLSAARGYFMY+KNF+KHGTTG++ NHI+EGDELAVVYDG+A+RVS+PQTEIRH SLF SLLISDERERNGKNVP+RSI+RRM STSE+VLS+C++ITYLNAEYDE+GGTLYSASAEEEN+SEAW TC ALY CDGYG LEGCFNCAIE+RRGAIVDES+VF NDVQVPVVFDKL+RK+++AEE+S MS++RG TYPGAFISGRDQCNERT+LAG+ H   +  L   L+ +LR+
Sbjct:    5 PDDVDRLQACAEGDYQTFLRLFQIACDVQAIVGVSQGGES-MGHLRAERLKAMGLSLYGPASTVTLVSNGAGVLFVLQRDSLTSLVFEGVQFDLDPGEDVPVDLILKAVLETSQNVDIDDLKAILSSIKFPIRLDETDGIADINSGGLDIPGVTLTRSEFYTSRVLAMMMKTDIYEQGFYKKYVHSDRLGTTFTAVREGETATLTKINVLPDALSRPVKCDADIIGEDLFMHRRKGRKDRFRLSCAVSVNIWEEYESPEWFGYIHPPPNADAIRPADLTQLKERLEAYGVPDGGEVCRLVFHCLAHKSRNSNVKVDTLSAARGYFMYLKNFLKHGTTGTSFNHIVEGDELAVVYDGLAYRVSSPQTEIRHRSLFHSLLISDERERNGKNVPRRSILRRMSSTSEIVLSVCKDITYLNAEYDEEGGTLYSASAEEENVSEAWATCTALYACDGYGSLEGCFNCAIESRRGAIVDESAVFTNDVQVPVVFDKLFRKNSIAEEMSGMSEARGPTYPGAFISGRDQCNERTFLAGKSHNMTSMTLASVLRNDLRL 554          
The following BLAST results are available for this feature:
BLAST of Ggra8430.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IFH10.000e+081.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q8Q22.790e-29772.23Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..43
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:605950..607980 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8430.t1Ggra8430.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 605950..607980 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8430.t1 ID=Ggra8430.t1|Name=Ggra8430.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=677bp
MRSEEDDSPGVAPRRRWSRRQTQRSAPLSDHSSSASASDNPKSFGAMSAV
RRLLTGQDSSAKMRVARSVKHAPKAAPPPCTVCAENELARVTPEEQLLRL
RQLSQRCAPDAVDRLEMVMHGDYHRLLRLFRIACDVQLIVGVHERQDSAM
AHLYAERLNAMAITLYGRDITVSVVSNGAGALFVCRMHNIISLLWEGIQF
DVTESDDTPIDLIMKAVIESSLDADLDDLQGILSSIRFARPAEEADAIDD
LNAGGLDMPSLNLLRPEFFTTRVLCMMLKTDIYEQGFYRRYVHVDRLGTT
FTAVREGETAMLTKINVLPDAMSRPVKNGEDIIGEDLFMTRRKGRKDKFR
LSCSVSVNVWEEYETPEWFGYIHPPPNADAMRPANLQELRDRLEAYGVPD
GLEVCRIVYHCLGHKSKNANVKVDTLSAARGYFMYMKNFMKHGTTGSATN
HIIEGDELAVVYDGIAFRVSAPQTEIRHNSLFMSLLISDERERNGKNVPK
RSIIRRMCSTSEVVLSLCREITYLNAEYDEDGGTLYSASAEEENLSEAWT
TCVALYVCDGYGCLEGCFNCAIENRRGAIVDESSVFMNDVQVPVVFDKLY
RKSTLAEELSAMSDSRGATYPGAFISGRDQCNERTYLAGERHVFVAGGLL
RYLQRELRIDWGGRKEERSEVSVIEL*
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