Ggra8423.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8423.t1
Unique NameGgra8423.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length407
Homology
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BLAST of Ggra8423.t1 vs. uniprot
Match: A0A2V3IDC6 (J domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDC6_9FLOR)

HSP 1 Score: 73.2 bits (178), Expect = 3.790e-11
Identity = 48/147 (32.65%), Postives = 74/147 (50.34%), Query Frame = 0 
Query:    6 TLPVNLKQTLRHFNTF-----------------ESGHTSLLSVSCIKENQTTMRTVRKAFRKLAILVHPDRCKDHMNAAHRSMRLLSRALHLANAELQLTKERKVIFKDTEFYLDYSVLLSTETTRTEYKLKEIEKASRNRPSEENT 135
            TLP   ++ LRHFN                   E   T LL + C   +   +R+V+ A+R+LA LVHPDRC+ +   A RSM  LSRA+    +E+Q  +  +   +D EF L  SV+ S   T  E  L+  ++ +++  ++E T
Sbjct:    6 TLPDTPQKALRHFNMIATXXXXXXXXXXXXXXIEDKTTPLLRLFCFSGSSAPLRSVKNAYRRLAALVHPDRCQTNSRGATRSMMTLSRAMDTLQSEVQFQQIFQDTTEDKEFVLKSSVMYSIAETNHELYLRNHDQLAQSTDADEET 152
The following BLAST results are available for this feature:
BLAST of Ggra8423.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IDC63.790e-1132.65J domain-containing protein n=1 Tax=Gracilariopsis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 144..181
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..188
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 121..244
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 214..244
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 289..319
IPR001623DnaJ domainSMARTSM00271dnaj_3coord: 26..92
e-value: 0.0027
score: 27.0
IPR001623DnaJ domainPROSITEPS50076DNAJ_2coord: 24..105
score: 9.144514
IPR001623DnaJ domainCDDcd06257DnaJcoord: 40..73
e-value: 1.62251E-7
score: 45.6141
IPR036869Chaperone J-domain superfamilyGENE3D1.10.287.110DnaJ domaincoord: 27..143
e-value: 1.2E-6
score: 30.8
IPR036869Chaperone J-domain superfamilySUPERFAMILY46565Chaperone J-domaincoord: 27..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:569034..570863 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8423.t1Ggra8423.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 569034..570863 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8423.t1 ID=Ggra8423.t1|Name=Ggra8423.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=407bp
MEDNITLPVNLKQTLRHFNTFESGHTSLLSVSCIKENQTTMRTVRKAFRK
LAILVHPDRCKDHMNAAHRSMRLLSRALHLANAELQLTKERKVIFKDTEF
YLDYSVLLSTETTRTEYKLKEIEKASRNRPSEENTAMPFDKKESEDATKQ
REKDKEREEELRRQQVRKQQKQRELKSQHQREREQRQSAVEAGISAPHCT
DQGYGAESMTSEELRRTWWTERGDGDDADSGDDVHDDVENEHSEAQIDDI
EGFCAANYIRSISAEFVSSALGSGSVACNPDGDSGECDAAVGDTSAIASP
QGEFHGDQNISPGPKSGDRRAKAALEADLDGSKSWRPKRCVEITPQVGIS
LNFRWQCEQLIRAYTAYIGVQKAITVAQTLERVTTECRQANCNTKLTFNW
QLRSGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001623DnaJ_domain
IPR036869J_dom_sf