Ggra8420.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8420.t1
Unique NameGgra8420.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length164
Homology
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BLAST of Ggra8420.t1 vs. uniprot
Match: A0A2V3ITV7 (C2 NT-type domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITV7_9FLOR)

HSP 1 Score: 135 bits (341), Expect = 2.390e-35
Identity = 66/94 (70.21%), Postives = 79/94 (84.04%), Query Frame = 0 
Query:   52 KFEVRVESGDKITTTIDVYVTWERGAKLLATRPCKIDRQSKTAHFGGEPLSQEVTLFKKKRDNAQFEPKIYKLYVRQANERGKILARIDLDFSD 145
            K+E+  ES DK+TTT DV VTWERG KLLAT+P ++D+Q++ AHF G+ L QE TLFKKKRDNAQFEPK YKL VRQ NERGKILA+I+L+FSD
Sbjct:   26 KYEINFESVDKLTTTGDVCVTWERGPKLLATKPVRVDKQTRMAHFVGQSLVQEATLFKKKRDNAQFEPKAYKLNVRQNNERGKILAKIELNFSD 119
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BLAST of Ggra8420.t1 vs. uniprot
Match: A0A1X6NUJ0 (C2 NT-type domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NUJ0_PORUM)

HSP 1 Score: 82.0 bits (201), Expect = 2.310e-15
Identity = 42/98 (42.86%), Postives = 61/98 (62.24%), Query Frame = 0 
Query:   53 FEVRVESGDKITTTIDVYVTWERGAKLLATRPCKIDRQSKTAHFGGEPLSQEVTLFKKKRDNAQFEPKIYKLYVR-----QANERGKILARIDLDFSD 145
            F +  ES DK+TTT DV + WER  K   T+P K+DR S+ A+FGGE LSQEVTLFK    + +F  K++K+ +R     +A  +   + +I L+ +D
Sbjct:   27 FAITAESVDKLTTTSDVCIVWERNGKQELTKPVKVDRASRKANFGGERLSQEVTLFKNNPSDKKFVDKVFKIAIRAVGDTKAGTKPATVGKIHLNLAD 124
The following BLAST results are available for this feature:
BLAST of Ggra8420.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ITV72.390e-3570.21C2 NT-type domain-containing protein n=1 Tax=Graci... [more]
A0A1X6NUJ02.310e-1542.86C2 NT-type domain-containing protein n=1 Tax=Porph... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019448NT-type C2 domainPFAMPF10358NT-C2coord: 66..145
e-value: 6.8E-7
score: 29.1
IPR019448NT-type C2 domainPROSITEPS51840C2_NTcoord: 41..163
score: 15.417704

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:541038..548073 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8420.t1Ggra8420.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 541038..548073 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8420.t1 ID=Ggra8420.t1|Name=Ggra8420.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=164bp
MCAPPAPLLITRRAAFERFALRSPSAFVALCSFVSRAAVASFPPPSLASS
SKFEVRVESGDKITTTIDVYVTWERGAKLLATRPCKIDRQSKTAHFGGEP
LSQEVTLFKKKRDNAQFEPKIYKLYVRQANERGKILARIDLDFSDEFSLL
LKRHISLINWTLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019448NT-C2