Ggra8395.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8395.t1
Unique NameGgra8395.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length359
Homology
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BLAST of Ggra8395.t1 vs. uniprot
Match: A0A2V3IKP3 (Kinesin-like protein KIF21B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKP3_9FLOR)

HSP 1 Score: 481 bits (1239), Expect = 4.640e-168
Identity = 234/357 (65.55%), Postives = 285/357 (79.83%), Query Frame = 0 
Query:    1 MNGNNRKQSALWTVGRASRGLLRCSDTHRDLIIAGTALTNSDNSMHILSVDCEAISLQPLNILTAPSEVWSHDVVAKDSNLNIIAATRKSYTSAVEVWSLTGADDLSPRISRSPSWDASGYDAHPIRNTSFMAIDGDILKVVKNPAATSSYIALTKTGATFLSVGTSLQIALSLQLDRSKFPVKSETDTFVDAGWIDETTAYIASTKCFAAFDLRSGEFELVTDTEQAINSSTSVQDDLYVPPYPTRISTTLSTNGTELIVGGEDGSLRSYDMKKSNIVWQLPLAHAQWVSTLCETRAGQFLSGGMDGVVRCWTKEGHPIATFPQHDDIVTNAISFDSAFVSVSYDGRLAMNELPTA 357
            M  + RKQ+ALWTVGR SRGLLRCSD  R L+IAGTA+TN +N++HILSVD + ISL PLN+LT PSEVWS +VV KDSNL+++AATRK Y SAVEVWSL  ADDLSPR S+   W +S Y+A PIRNTSF+AIDGDILKVVKNP+ +SSY+ALTK  A FL+VG SL+I ++  L+ +K  + SETD+ VDAGWIDE TAY+AST+C    D R+G    V +T++AI+S     D L VP +PTRIST+L+  G +++VGGEDGSLR Y+ K SN+VWQ+  AH QWVSTLCET+ G FLSGGMDGVVRCW K+G P+ATFPQHDDIVTNA SFD+AFV+VSYDGR+A+NELP A
Sbjct:    1 MTESKRKQAALWTVGRGSRGLLRCSDRRRKLVIAGTAVTNDENAIHILSVDNDEISLTPLNVLTTPSEVWSLEVVGKDSNLHLVAATRKGYRSAVEVWSLMRADDLSPRASQPSEWGSSEYEAAPIRNTSFLAIDGDILKVVKNPSDSSSYMALTKKSAVFLTVGISLKIGVASSLESTKLLLMSETDSLVDAGWIDENTAYVASTRCLGICDTRTGTLGSVIETDKAISSYCKSGDGLQVPSHPTRISTSLAIGGDQVVVGGEDGSLRCYECKTSNVVWQVSNAHTQWVSTLCETQGGGFLSGGMDGVVRCWRKDGQPVATFPQHDDIVTNACSFDNAFVTVSYDGRIALNELPVA 357
The following BLAST results are available for this feature:
BLAST of Ggra8395.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IKP34.640e-16865.55Kinesin-like protein KIF21B n=1 Tax=Gracilariopsis... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 316..353
e-value: 52.0
score: 6.2
coord: 275..314
e-value: 0.76
score: 17.8
coord: 235..272
e-value: 310.0
score: 1.3
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 182..354
e-value: 7.4E-16
score: 60.3
IPR011047Quinoprotein alcohol dehydrogenase-like superfamilySUPERFAMILY50998Quinoprotein alcohol dehydrogenase-likecoord: 77..351

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000041_piloncontigtig00000041_pilon:463851..464927 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8395.t1Ggra8395.t1Gracilaria gracilis GNS1m malemRNAtig00000041_pilon 463851..464927 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8395.t1 ID=Ggra8395.t1|Name=Ggra8395.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=359bp
MNGNNRKQSALWTVGRASRGLLRCSDTHRDLIIAGTALTNSDNSMHILSV
DCEAISLQPLNILTAPSEVWSHDVVAKDSNLNIIAATRKSYTSAVEVWSL
TGADDLSPRISRSPSWDASGYDAHPIRNTSFMAIDGDILKVVKNPAATSS
YIALTKTGATFLSVGTSLQIALSLQLDRSKFPVKSETDTFVDAGWIDETT
AYIASTKCFAAFDLRSGEFELVTDTEQAINSSTSVQDDLYVPPYPTRIST
TLSTNGTELIVGGEDGSLRSYDMKKSNIVWQLPLAHAQWVSTLCETRAGQ
FLSGGMDGVVRCWTKEGHPIATFPQHDDIVTNAISFDSAFVSVSYDGRLA
MNELPTAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR011047Quinoprotein_ADH-like_supfam