Ggra8301.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8301.t1
Unique NameGgra8301.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length554
Homology
BLAST of Ggra8301.t1 vs. uniprot
Match: A0A2V3IBT3 (Uncharacterized protein n=4 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IBT3_9FLOR)

HSP 1 Score: 168 bits (426), Expect = 6.270e-42
Identity = 127/434 (29.26%), Postives = 213/434 (49.08%), Query Frame = 0
Query:   93 LMKSKKENWEDMIEHILVVDPSFFDGPDGRMEDPTKKKRGSHFYKGLSLTTDNCEDIQLIYDVRYRAASVFQKK-SDAFDGVRSVAGQLMRLAIASKLMDRHEGYIKNRLFRFLSDFEVVEYFVNHFVLTTSPYTVASKCNFLLRLISVGETQLQD-AQGMSAKFEKVATYLRSMAASSKKEGRAK-RRRERLIDISSDKHNLLYDSDLRKAFSLAKHQLEDVMKTFRLDEHKKKDSFNARLREKPSLVDKWFINFLAAVVFSCGGQRPQAVSSIQVPTKHELDRVESTAF-GDFFSLRSNFDKRERSLNFPAVMLPVSMKPLVNFHVKVMRTFVCRRMNISFAAESNPLLLHSHEGTGLTTRSITNSIRMFMTNINKRYEFVTSMVVRASYATSMVHCFKTNKIGEGLSEEKFLDLLANRMNTSAEQLKDAYV 522
            L +S +  W + + H+    P  F+  + R   P     G+ ++KG+  T  NC  ++ +Y+  Y+       K + AF  + +   Q +R AI +    R + + ++ LFR L+D +VV  F+   +L +SP TV ++   + R+  VG     D A GM  K   V   L+ M  +S+   R + + ++ LI+ S  +H      DL K  +L    L   M++F     K++   +A  +   S +  W +NF+  ++   GGQRPQ  S +Q+P + E  ++   A    +  LR+  +KR R ++ P ++LPV++ P + FHVK MR  +      S      PL + S    G     +T  +++F+++       VTSM +R  YAT M+  ++   I   L+E  FL+ LA +MNTS EQLK  YV
Sbjct:  130 LERSYESRWYEQLRHLEKCHPKLFELLEVRDAGP-----GTFYFKGIGATVKNCLGLRRVYETYYKPRLQNNGKGAAAFTHLSTTVSQFLRWAICTSTCSRKDVWKEHVLFRALADQKVVNRFIEMLMLRSSPGTVKNRITSMKRVCDVGVIISGDTAIGMRLKL--VLIVLQHMENASRCAYRKRCQAKKDLINRSVPRH-----LDLIKRRALG--ALNFTMRSFW--HRKQRSGTDAARKSMRSYLQIWNMNFMGLIMLVSGGQRPQVFSGLQLPNEEEFQQLTFQAEQSSYIELRTGTEKRPRYIDLPFMILPVTVMPYLTFHVKYMRPEIQEAAGRSDEGLFEPLFIDSKTALGFKPSQVTRRLQLFLSSHGIERGCVTSMDLRRDYATRMLRNYRQKCIFSNLTENAFLEKLAQQMNTSVEQLKRTYV 547          
The following BLAST results are available for this feature:
BLAST of Ggra8301.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IBT36.270e-4229.26Uncharacterized protein n=4 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000958_piloncontigtig00000958_pilon:114556..116217 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8301.t1Ggra8301.t1Gracilaria gracilis GNS1m malemRNAtig00000958_pilon 114556..116217 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8301.t1 ID=Ggra8301.t1|Name=Ggra8301.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=554bp
MIRRAIIPESDSEDERLHHYGHSSDDDTDQFDPSQGFCTPLSAQHDDNND
PRAAFRRRLNVQRRSLPAPTPQHVQIFRSKRRRLESPRAAKELMKSKKEN
WEDMIEHILVVDPSFFDGPDGRMEDPTKKKRGSHFYKGLSLTTDNCEDIQ
LIYDVRYRAASVFQKKSDAFDGVRSVAGQLMRLAIASKLMDRHEGYIKNR
LFRFLSDFEVVEYFVNHFVLTTSPYTVASKCNFLLRLISVGETQLQDAQG
MSAKFEKVATYLRSMAASSKKEGRAKRRRERLIDISSDKHNLLYDSDLRK
AFSLAKHQLEDVMKTFRLDEHKKKDSFNARLREKPSLVDKWFINFLAAVV
FSCGGQRPQAVSSIQVPTKHELDRVESTAFGDFFSLRSNFDKRERSLNFP
AVMLPVSMKPLVNFHVKVMRTFVCRRMNISFAAESNPLLLHSHEGTGLTT
RSITNSIRMFMTNINKRYEFVTSMVVRASYATSMVHCFKTNKIGEGLSEE
KFLDLLANRMNTSAEQLKDAYVHIRRVDYEKGVKLAMEHFLVVMDEDKDE
NDM*
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