Ggra8289.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8289.t1
Unique NameGgra8289.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length314
Homology
BLAST of Ggra8289.t1 vs. uniprot
Match: A0A2V3II26 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II26_9FLOR)

HSP 1 Score: 250 bits (639), Expect = 6.220e-74
Identity = 140/260 (53.85%), Postives = 185/260 (71.15%), Query Frame = 0
Query:   18 EEEHTVIQAMDID-KSPPPLTKEELLVEEAFRSLECSQDVPEADADXXXXXXXXXQSQLKSPLDATSLSEASQSXXXXXDAKLAKLENIRASRRSARTSNPVRQLDPSHIREASVFGSGPIPSRGAGDIIRNPETYLPKILSIRNVRERKEDELKQIREDIEKPTQAQQDEALFASMAKSEQEAEEMRLAAVKKYSAPVPLFSNSFTIAQMPEKYLVRGGTRKNDDRD--TMGDLHEMVVDVVEAGEKGDRALSILLPTL 274
            E +H   Q MDI+  S  PLTKEEL +EE  RSLECSQDVPE                 K+  DATS S+  +S     D +LAK E +R +RRSARTSNPV++ DPS   +ASVFG+  + SRG  D++RNPE YL K++  ++ RERKEDEL+Q+R+D++KPTQ  +DE +FA+MAK+EQEAEE RLAA+ KYSAP+PLF   FTI QMP KYLV+GG+ +++++   T+   H+M+VD+VEAGE+GDRALS+L+P L
Sbjct:  101 EPKHEAQQLMDIEPNSTVPLTKEELELEEGIRSLECSQDVPEE----------------KTARDATSCSDTGESSSEDSDEELAKFEQMRTTRRSARTSNPVQRFDPSDAPKASVFGTEQLRSRGRADVVRNPELYLAKLVREQSARERKEDELQQMRDDLQKPTQVHKDEEMFATMAKAEQEAEERRLAALDKYSAPIPLFCKPFTIPQMPAKYLVKGGSNRDENQPYKTLHTAHDMLVDIVEAGEQGDRALSVLVPIL 344          
BLAST of Ggra8289.t1 vs. uniprot
Match: A0A2V3IUI6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUI6_9FLOR)

HSP 1 Score: 98.2 bits (243), Expect = 4.020e-21
Identity = 52/104 (50.00%), Postives = 75/104 (72.12%), Query Frame = 0
Query:  173 IREDIEKPTQAQQDEALFASMAKSEQEAEEMRLAAVKKYSAPVPLFSNSFTIAQMPEKYLVRGGTRKNDDRD--TMGDLHEMVVDVVEAGEKGDRALSILLPTL 274
            +R D++KPTQ  ++E +FA+M K+EQ A+E  LAA+ KYSAP+PL    FTI QMP KYL+RGG+ ++D++   T    H+M+    +AGE+GD ALS+L+P L
Sbjct:    1 MRHDLQKPTQVHKEEEMFATMPKAEQVAKERLLAALHKYSAPIPLLCKPFTIPQMPSKYLLRGGSYRDDNQPYKTPHAAHDMLAYKFKAGEQGDHALSVLIPIL 104          
BLAST of Ggra8289.t1 vs. uniprot
Match: A0A2V3ILJ6 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILJ6_9FLOR)

HSP 1 Score: 53.9 bits (128), Expect = 8.690e-6
Identity = 41/115 (35.65%), Postives = 57/115 (49.57%), Query Frame = 0
Query:   27 MDID-KSPPPLTKEELLVEEAFRSLECSQDVPEADADXXXXXXXXXQSQLKSPLDATSLSEASQSXXXXXDAKLAKLENIRASRRSARTSNPVRQLDPSHIREASVFGSGPIPSR 140
            MDI+  S   LT+EEL ++E   SL+ SQDVP+                 K+  DATS S+   S       + AK E +R +R SART NPV++ D       +V G+  + SR
Sbjct:    1 MDIEPNSTALLTREELALQEEISSLQVSQDVPKE----------------KTARDATSCSDTGLSSSEDSYDETAKFEQMRTTRISARTFNPVKRFDTPDTPTENVLGTEQLRSR 99          
The following BLAST results are available for this feature:
BLAST of Ggra8289.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3II266.220e-7453.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IUI64.020e-2150.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ILJ68.690e-635.65Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 156..179
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 70..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000179_piloncontigtig00000179_pilon:275534..276475 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8289.t1Ggra8289.t1Gracilaria gracilis GNS1m malemRNAtig00000179_pilon 275534..276475 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8289.t1 ID=Ggra8289.t1|Name=Ggra8289.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=314bp
MQLQSRRKSTRSHAFMEEEEHTVIQAMDIDKSPPPLTKEELLVEEAFRSL
ECSQDVPEADADAEADAQAKPQSQLKSPLDATSLSEASQSSSEDSDAKLA
KLENIRASRRSARTSNPVRQLDPSHIREASVFGSGPIPSRGAGDIIRNPE
TYLPKILSIRNVRERKEDELKQIREDIEKPTQAQQDEALFASMAKSEQEA
EEMRLAAVKKYSAPVPLFSNSFTIAQMPEKYLVRGGTRKNDDRDTMGDLH
EMVVDVVEAGEKGDRALSILLPTLAANHTLMFAYPLLFTACCTILQCLIA
HRQTLAEDHETSL*
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