Ggra8233.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8233.t1
Unique NameGgra8233.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length259
Homology
BLAST of Ggra8233.t1 vs. uniprot
Match: A0A2V3J5Q2 (Protein IMPACT n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5Q2_9FLOR)

HSP 1 Score: 315 bits (807), Expect = 1.340e-105
Identity = 154/252 (61.11%), Postives = 189/252 (75.00%), Query Frame = 0
Query:    1 MEDEVEAVSAIYGEENVFHSPSTNSMPTTVSILLESCLGKIRISAQIAEDYPTTHPRPTLRSDALSVQQCETLVDMMMERQASKAGEVCLFEYXXXXXXXXXXXXDVLGNEIRGEPSAAGERTVGAEHRFKVFHGEPLTDRKSVFQAHLAFVSSTNDVDGVLTQLCESKKVESATHNMMAWIVGGGEDFDDDGEKGAGKVVLHVLKQFEARNTLCVVSRWFGGVKLGPARFRHIANVTRDLLNAHQNAVKRG 252
            +EDE++A+SAIYG ENV  + +T +MP TVS+ L+SC+GK+ +SAQ+AEDYP  HPRPTLRSD+LSV +CE ++  M+E++ S  GEVCLFEY            D    E     S   +    AE  F+VFHGEPLTDRKSVFQAH+AF+SS  DV  V+ QLC+SKKVE+ATHN MAW V   EDFDDDGEK AGKV+LHVL+QF+A+NTLCVVSRWFGG+ LGP RFRHIANVTRD+L AH+ AV+ G
Sbjct:    6 LEDEMQALSAIYGNENVLFNEATVTMPATVSVTLDSCIGKVALSAQLAEDYPAMHPRPTLRSDSLSVSECEKVIKNMLEKEQSTHGEVCLFEYCETVLNVLQEHKDTSVKE----QSPRDDSKKIAEQVFQVFHGEPLTDRKSVFQAHMAFISSPEDVGQVIKQLCQSKKVENATHNTMAWRVNNEEDFDDDGEKSAGKVMLHVLRQFDAKNTLCVVSRWFGGILLGPVRFRHIANVTRDILVAHEEAVRAG 253          
BLAST of Ggra8233.t1 vs. uniprot
Match: R7QU75 (RWD domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QU75_CHOCR)

HSP 1 Score: 184 bits (466), Expect = 1.210e-53
Identity = 115/263 (43.73%), Postives = 150/263 (57.03%), Query Frame = 0
Query:    4 EVEAVSAIYGEENV-FHSPSTNSMPTTVSILLESCLG-------KIRISAQIAEDYPTT-HPRP-TLRSDALSVQQCETLVDMMMERQASKAGEVCLFEYXXXXXXXXXXXXDVLGNEIRGEPSAA-----GERTVGAEHRFKVFHGEPLTDRKSVFQAHLAFVSSTNDVDGVLTQL-CESKKVESATHNMMAWIVGGG----EDFDDDGEKGAGKVVLHVLKQFEARNTLCVVSRWFGGVKLGPARFRHIANVTRDLLNAHQ 246
            EVEA+ AIYG+ENV F S         +S+ LES L        KI +S  +   YPTT  P P TLRSDA S      LV  M++   +  GEVCLF+Y                +E+  +  AA           +E ++++ HGEPLTDRKSVFQAH+A V S++DVD VL QL   ++K+ +ATHN  A+ +       +D DDDGE GAGK +L +L+Q  A + +CVVSRW+GG KLGP RF+HI  V RDLL   Q
Sbjct:   12 EVEALQAIYGDENVSFQSHDPLHATAKISVSLESLLTQPHTLGRKISLSTSLPSGYPTTAKPNPPTLRSDAFSSATAARLVAQMLDDVFAPEGEVCLFQYCQDIVSILETFSH--DSELSRDAGAAVSGPTDNSKQSSEDQYEIMHGEPLTDRKSVFQAHVAEVRSSSDVDAVLEQLKASNRKIATATHNPFAYRIATERSIQQDADDDGENGAGKNILFILQQTNAIDVICVVSRWYGGSKLGPVRFKHICKVARDLLELRQ 272          
BLAST of Ggra8233.t1 vs. uniprot
Match: A0A7J7JC76 (RWD domain-containing protein n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7JC76_BUGNE)

HSP 1 Score: 138 bits (348), Expect = 5.420e-36
Identity = 91/259 (35.14%), Postives = 134/259 (51.74%), Query Frame = 0
Query:    3 DEVEAVSAIYGEENVFHSPSTNSMPTTVSILLESCLGKIRISAQIAEDYPTTHPRPTLRSDA--LSVQQCETLVDMMMERQASKAGEVCLF-------EYXXXXXXXXXXXXDVL--GNEIRGEPSAAGERTVGAEHRFKVFHGEPLTDRKSVFQAHLAFVSSTNDVDGVLTQLCESKKVESATHNMMAWIVGGG-----EDFDDDGEKGAGKVVLHVLKQFEARNTLCVVSRWFGGVKLGPARFRHIANVTRDLLNAH 245
            +EVEA+SAIYGE+ V  S +       ++        ++R+  ++ + YP+  P P    DA  LS +   T+ D +    A   G+  ++       EY             V    + +     A+       E   ++FH EP+TDRKS FQAH+A V++T+ V  V+  L  +KK+ +ATHN+ A+ +  G     ED DDDGE  AG  VLH+L    A N L VVSRW+GG++LGP RF+HI N  R++L  H
Sbjct:   13 EEVEALSAIYGEDWVVESEANRKYIININ-------SEVRLQVRLPDGYPSDAP-PYFELDAVQLSGEDRATITDQLNLLYAENIGQPIIYIWTEAIREYLSIIESKEPEESQVTVDTSPVSQLLDASTLLAETVEDCPEIFHDEPITDRKSTFQAHVAMVTTTSQVSLVMRTLLSNKKISAATHNIQAYRIRLGNKSICEDCDDDGETQAGSRVLHLLNIVGAVNVLVVVSRWYGGIQLGPDRFKHINNCARNILEKH 263          
BLAST of Ggra8233.t1 vs. uniprot
Match: A0A5J4Z1T8 (Protein IMPACT n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z1T8_PORPP)

HSP 1 Score: 138 bits (347), Expect = 7.990e-36
Identity = 91/261 (34.87%), Postives = 133/261 (50.96%), Query Frame = 0
Query:    1 MEDEVEAVSAIYGEENVFHSPSTNSMPTTVSILLESC-LGKIRISAQIAEDYPTTHPRPTLRSDALSVQQCETLVDMMMERQASKAGEVCLFEYXXXXXXXXXXXXDVLGNEIRG----EPSAAGERTVGAEHRFK-------VFHGEPLTDRKSVFQAHLAFVSSTNDVDGVLTQLCESKKVESATHNMMAWIVGGGE-------DFDDDGEKGAGKVVLHVLKQFEARNTLCVVSRWFGGVKLGPARFRHIANVTRDLL 242
            +++E EA+ AIYGE+ V        + T +S+ +E    G+  + A ++++YP   P   + ++ L+  +   L+  ++    ++ G   LF                   E  G     P  A E T G             + HGE +TDRKSVFQAH A V S   V+ V++ L ++ KV +ATHNM+A+ +   E       D DDDGEK AGK +LHVL+     N L VVSRW+GG  LGP RF+HIAN TR ++
Sbjct:    9 VQNEYEALLAIYGEDTVSRKLEGGRI-TQISVRIEVAGRGQCLLRADVSQNYPAKLPELEVYANFLNSNEQRVLLADLIAHIQNEVGFPVLFSCVTFVTERTTQHTASNQPEHEGFDTTVPQLAQEETDGVPKVLSSAAVLGDLLHGEIITDRKSVFQAHYAAVYSKEHVEEVVSTLLQNSKVANATHNMLAYRIRSAETQNALVADCDDDGEKAAGKHILHVLEMLGCENALVVVSRWYGGTPLGPVRFKHIANATRQVV 268          
BLAST of Ggra8233.t1 vs. uniprot
Match: H2ZPV9 (RWD domain-containing protein n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2ZPV9_CIOSA)

HSP 1 Score: 136 bits (342), Expect = 2.570e-35
Identity = 90/249 (36.14%), Postives = 135/249 (54.22%), Query Frame = 0
Query:    3 DEVEAVSAIYGEENVFHSPSTN--SMPTTVSILLESCLGKIRISAQIAEDYPTTHPRPTLRSDA-LSVQQCETLVDMMMERQASKAGEVCLFEYXXXXXXXXXXXXDVLGNEIRGEPSAAGERTVGAEHRFKVFHGEPLTDRKSVFQAHLAFVSSTNDVDGVLTQLCESKKVESATHNMMAWIVGGG------EDFDDDGEKGAGKVVLHVLKQFEARNTLCVVSRWFGGVKLGPARFRHIANVTRDLL 242
            +E+EA+S+IYGE      P +   S   TVS     C   +R +  +  +YP+  P   L   A L   + E L   ++   +   GE  LF +            D+  N+++  P    E  +   +  ++ HGEPLTDRKS FQ HLA V   NDV  VL +L +++K+++ATHN+ A+ +         +D +DDGE  AG  +LH+L+  + +N L VVSRW+GG++LGP RF+HI NVTR +L
Sbjct:   11 EEIEAISSIYGENWRVIDPFSRIFSFSQTVS----KCTLDLRFTLPL--NYPSEKPPEFLIKGAGLKQPEIEDLKTKLICIYSENIGEGVLFLWIEAAREFMQ---DLSANDVQELPLTT-EENISCVNVPEIKHGEPLTDRKSTFQGHLATVHCANDVKLVLCELLKNRKIQNATHNISAYRIYDEHKTIIIQDCNDDGETAAGTRMLHLLQILDVKNVLVVVSRWYGGIQLGPDRFKHINNVTRSIL 249          
BLAST of Ggra8233.t1 vs. uniprot
Match: protein IMPACT-A-like n=1 Tax=Microplitis demolitor TaxID=69319 RepID=UPI0004CDA89B (protein IMPACT-A-like n=1 Tax=Microplitis demolitor TaxID=69319 RepID=UPI0004CDA89B)

HSP 1 Score: 135 bits (340), Expect = 5.750e-35
Identity = 91/256 (35.55%), Postives = 132/256 (51.56%), Query Frame = 0
Query:    3 DEVEAVSAIYGEENVFHSPSTNSMPTTVSILLESCLGKIRISAQIAEDYPTTHP-RPTLRSDALSVQQCETLVDMMMERQASKAGEVCLFEYXXXXXXXXXXXXD------VLGNEIRGEPSAAGERTVGAEHRF--KVFHGEPLTDRKSVFQAHLAFVSSTNDVDGVLTQLCESKKVESATHNMMAW-IVGGGEDF----DDDGEKGAGKVVLHVLKQFEARNTLCVVSRWFGGVKLGPARFRHIANVTRDLLNA 244
            DEVEA+ AIYGE+         +    V    +S    I++  ++  DYP++ P    L +  L ++Q   +  ++ E   S AGE  L+ +                   +   E+      +    V  E     ++FHGE + DRKS FQ H+A V ST+DV  VL +L   KK+E ATHNM A+ IV   ++F    +DDGE  AG  +LH+L+  +A+N + V+SRW+GGV LGP RFRHI N  R +L A
Sbjct:    9 DEVEALRAIYGEDWQVEDEENGAFSMNVHEGNKS----IKLYVKLTADYPSSAPPHYELSAPELRLEQKNHICSLLQEVYLSLAGEPVLYAWIEKIREELQKDKSCTEKSVIKDKEVDKSQDNSSNLNVNIEDEKCPEIFHGEVIVDRKSSFQGHVAQVFSTHDVKMVLKKLYRIKKIEQATHNMYAYRIVTDNKNFVQDCEDDGENQAGGRLLHLLQIVDAKNVIVVISRWYGGVHLGPDRFRHINNAARQVLEA 260          
BLAST of Ggra8233.t1 vs. uniprot
Match: protein IMPACT-like n=1 Tax=Dermatophagoides farinae TaxID=6954 RepID=UPI001F0EF7EC (protein IMPACT-like n=1 Tax=Dermatophagoides farinae TaxID=6954 RepID=UPI001F0EF7EC)

HSP 1 Score: 134 bits (336), Expect = 1.850e-34
Identity = 91/254 (35.83%), Postives = 130/254 (51.18%), Query Frame = 0
Query:    3 DEVEAVSAIYGEENVFHSPSTNSMPTTVSILLESCLGKIR---ISAQIAEDYPT-THPRPTLRSDALSVQQCETLVDMMMERQASKAGEVCLFEYXXXXXXXXXXXXDVLGNEIRGEPSAAGERTVGAEHRFKVFHGEPLTDRKSVFQAHLAFVSSTNDVDGVLTQLCESKKVESATHNMMAWIVGGGE-------DFDDDGEKGAGKVVLHVLKQFEARNTLCVVSRWFGGVKLGPARFRHIANVTRDLLNAH 245
            DE+ A+SAIYG++    +  T++   ++ I  E+   KI    I  ++ + YP+   P  T+ +  +S +    L+D +        GE  L+                   E   E     E    AE    ++HG P+TDRKS FQAHLAFV S   V  VL QL  +KK++ ATHN+ A+ +   E       D+DDDGE  AG  +L +L+  +A+N L +VSRWFGG  LG  RFRHI NV ++LL  H
Sbjct:    9 DEIMALSAIYGDDWKVENLDTSTF--SLRIFSENDPDKIHPSTIEFRLPQKYPSEAKPMITISAPWMSREDKSMLIDDIDTICDEHLGENVLYMIIEKLKQFINEKISFEKIEESNEILQMNENIEPAE--IMIYHGSPITDRKSTFQAHLAFVESLTKVKNVLVQLKTNKKIDEATHNIYAYRIIDPERANKLDQDYDDDGETHAGSRLLKLLENMDAKNVLVIVSRWFGGTLLGVDRFRHIQNVAKELLVKH 258          
BLAST of Ggra8233.t1 vs. uniprot
Match: protein IMPACT-like n=1 Tax=Spodoptera litura TaxID=69820 RepID=UPI000C1424C5 (protein IMPACT-like n=1 Tax=Spodoptera litura TaxID=69820 RepID=UPI000C1424C5)

HSP 1 Score: 134 bits (336), Expect = 2.140e-34
Identity = 88/257 (34.24%), Postives = 136/257 (52.92%), Query Frame = 0
Query:    2 EDEVEAVSAIYGEENVFHSPSTNSMPTTVSILLESCLGKIRISAQIAEDYPTTHPRPTLRSDA--LSVQQCETLVDMMMERQASKAGEVCLFEYXXXXXXXXXXXXDVLGNEIRGEPSAAGERTVGAEHRF------KVFHGEPLTDRKSVFQAHLAFVSSTNDVDGVLTQLCESKKVESATHNMMAWIV----GGG----EDFDDDGEKGAGKVVLHVLKQFEARNTLCVVSRWFGGVKLGPARFRHIANVTRDLL 242
            ++E+EA++AIYG++    S  T S   ++ IL +    ++ +   + EDYP+  P P+    A  +  +    L   + E      GE  +F++                 E+     +    TV ++         ++ HGE + DRKS+FQ H A V S +DV+ VLT+L  +KK+ +ATHNM A+ +    G G    +D DDDGE  AG  +LH+L+  + +NTL VVSRW+GG++LGP RFRHI N TR  +
Sbjct:   10 DEEIEALNAIYGDDWTMESDKTRSY--SIKILEKEY--EVVLYVTMPEDYPSQSP-PSYEFSAPWMDRKDKSELHQALDEIYLENIGECVVFQWVEKIREVLQTIKPKKRREVNERTKSKSPPTVSSDTSLVHSDCPEITHGEVIVDRKSIFQGHAAEVHSIDDVNAVLTKLKMNKKICNATHNMYAYRIERKTGKGNSILQDCDDDGEAHAGGRMLHLLQILDQKNTLVVVSRWYGGIQLGPDRFRHINNATRQAI 261          
BLAST of Ggra8233.t1 vs. uniprot
Match: A0A0V1MG66 (Protein IMPACT n=9 Tax=Trichinella TaxID=6333 RepID=A0A0V1MG66_9BILA)

HSP 1 Score: 135 bits (339), Expect = 2.150e-34
Identity = 89/263 (33.84%), Postives = 132/263 (50.19%), Query Frame = 0
Query:    3 DEVEAVSAIYGEENVFHSPSTNSMPTTVSILLESCLG-KIRISAQIAEDYPTTHPRPTLRSDALSVQQCETLVDMMMERQASKA----GEVCLFEYXXXXXXXXXXXXDVLGNEIRGEPSAAGERTVGAE---HRFK------VFHGEPLTDRKSVFQAHLAFVSSTNDVDGVLTQLCESKKVESATHNMMA---------WIVGGGEDFDDDGEKGAGKVVLHVLKQFEARNTLCVVSRWFGGVKLGPARFRHIANVTRDLL 242
            DE++A+ AIYG+        T+   T V       L    +++    +DYP+  P      +      C  + +M M  +A KA    G V ++E+              + N  +   + +  +   +     +FK      ++ GEPLTDRKS FQAH+A V S  DV+ V+++L E+ K+  ATHNM A         WI    +D DDDGE  AG V+LH L+  + RN L VVSRW+GG++LG  RF+HI+NV R +L
Sbjct:   51 DEIQALLAIYGDRC-----KTDEDGTLVWTFKHDELDFSFKLTVNFPDDYPSNAP-----PNFTIFSPCMKMNEMQMISKALKAMWKNGSVVIYEWTEYLEDYLKKRNYTINNSNKNPETHSSSKPYSSGKSVEQFKSIVYPTIYSGEPLTDRKSTFQAHVAVVKSKQDVENVISKLLENSKIARATHNMFAYRIQLSNESWI----QDCDDDGENHAGSVLLHFLQTLDVRNVLVVVSRWYGGIQLGSDRFKHISNVARSVL 299          
BLAST of Ggra8233.t1 vs. uniprot
Match: A0A1Y3B9N9 (UPF0029 domain-containing protein n=1 Tax=Euroglyphus maynei TaxID=6958 RepID=A0A1Y3B9N9_EURMA)

HSP 1 Score: 129 bits (324), Expect = 5.140e-34
Identity = 65/132 (49.24%), Postives = 83/132 (62.88%), Query Frame = 0
Query:  123 TVGAEHRFKVFHGEPLTDRKSVFQAHLAFVSSTNDVDGVLTQLCESKKVESATHNMMAWIVGGGE-------DFDDDGEKGAGKVVLHVLKQFEARNTLCVVSRWFGGVKLGPARFRHIANVTRDLLNAHQN 247
            T   E +  ++HG P+TDRKS FQAHLAFV S   V  VL QL  ++K+E ATHN+ A+ +   E       D+DDDGE  AG  +L +L+   A+N L +VSRWFGG  LG  RFRHI NV ++LL  H N
Sbjct:   18 TEDTEAKIMIYHGSPITDRKSTFQAHLAFVESFTQVKNVLAQLKTNRKIEEATHNIYAYRIIDQERDNKFDQDYDDDGETHAGSRLLKLLENMNAKNVLVIVSRWFGGTLLGVDRFRHIQNVAKELLVKHNN 149          
The following BLAST results are available for this feature:
BLAST of Ggra8233.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5Q21.340e-10561.11Protein IMPACT n=1 Tax=Gracilariopsis chorda TaxID... [more]
R7QU751.210e-5343.73RWD domain-containing protein n=1 Tax=Chondrus cri... [more]
A0A7J7JC765.420e-3635.14RWD domain-containing protein n=1 Tax=Bugula nerit... [more]
A0A5J4Z1T87.990e-3634.87Protein IMPACT n=1 Tax=Porphyridium purpureum TaxI... [more]
H2ZPV92.570e-3536.14RWD domain-containing protein n=1 Tax=Ciona savign... [more]
protein IMPACT-A-like n=1 Tax=Microplitis demolitor TaxID=69319 RepID=UPI0004CDA89B5.750e-3535.55protein IMPACT-A-like n=1 Tax=Microplitis demolito... [more]
protein IMPACT-like n=1 Tax=Dermatophagoides farinae TaxID=6954 RepID=UPI001F0EF7EC1.850e-3435.83protein IMPACT-like n=1 Tax=Dermatophagoides farin... [more]
protein IMPACT-like n=1 Tax=Spodoptera litura TaxID=69820 RepID=UPI000C1424C52.140e-3434.24protein IMPACT-like n=1 Tax=Spodoptera litura TaxI... [more]
A0A0V1MG662.150e-3433.84Protein IMPACT n=9 Tax=Trichinella TaxID=6333 RepI... [more]
A0A1Y3B9N95.140e-3449.24UPF0029 domain-containing protein n=1 Tax=Euroglyp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006575RWD domainPFAMPF05773RWDcoord: 2..95
e-value: 1.4E-7
score: 31.8
IPR006575RWD domainPROSITEPS50908RWDcoord: 3..104
score: 14.787367
IPR001498Impact, N-terminalPFAMPF01205UPF0029coord: 141..242
e-value: 2.8E-32
score: 111.2
IPR036956Impact, N-terminal domain superfamilyGENE3D3.30.230.30coord: 130..250
e-value: 4.4E-35
score: 122.0
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 1..107
e-value: 1.8E-10
score: 42.5
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 2..96
IPR023582Impact familyPANTHERPTHR16301IMPACT-RELATEDcoord: 2..247
NoneNo IPR availablePANTHERPTHR16301:SF2PROTEIN IMPACTcoord: 2..247
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 131..245

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000872_piloncontigtig00000872_pilon:200939..201715 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8233.t1Ggra8233.t1Gracilaria gracilis GNS1m malemRNAtig00000872_pilon 200939..201715 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8233.t1 ID=Ggra8233.t1|Name=Ggra8233.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=259bp
MEDEVEAVSAIYGEENVFHSPSTNSMPTTVSILLESCLGKIRISAQIAED
YPTTHPRPTLRSDALSVQQCETLVDMMMERQASKAGEVCLFEYCETMLAL
LLERQDVLGNEIRGEPSAAGERTVGAEHRFKVFHGEPLTDRKSVFQAHLA
FVSSTNDVDGVLTQLCESKKVESATHNMMAWIVGGGEDFDDDGEKGAGKV
VLHVLKQFEARNTLCVVSRWFGGVKLGPARFRHIANVTRDLLNAHQNAVK
RGNVDGAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006575RWD-domain
IPR001498Impact_N
IPR036956Impact_N_sf
IPR016135UBQ-conjugating_enzyme/RWD
IPR023582Impact
IPR020568Ribosomal_S5_D2-typ_fold