Ggra823.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra823.t1
Unique NameGgra823.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length140
Homology
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BLAST of Ggra823.t1 vs. uniprot
Match: A0A2V3IRU2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRU2_9FLOR)

HSP 1 Score: 235 bits (600), Expect = 7.610e-78
Identity = 117/138 (84.78%), Postives = 126/138 (91.30%), Query Frame = 0 
Query:    1 MAAVFDFVSFPAFFIGFVVHMTMGMIWYSTPVFGKAFVQLALKGKMPTKPDPRAMVAAVLGTATAIPFFAFLLRVANCRGAGEGALWGLAFGVFFDSGLNASHSFFENRPFALFVLHRGYHCVSLTLVGALLGRLCGV 138
            MAAV+DFVSF AF IG+++HMTMGMIWYS PVFG AFV+LALKGKMPTKPDPRAM AA +GTATAIPFF+FLLRVANCR AGEGALWGLAFGVFFDSGLNASH FFENRPFALFVLHRGYH VSL ++GA LGRLC V
Sbjct:    1 MAAVYDFVSFQAFIIGWLLHMTMGMIWYSMPVFGSAFVRLALKGKMPTKPDPRAMFAACVGTATAIPFFSFLLRVANCRSAGEGALWGLAFGVFFDSGLNASHCFFENRPFALFVLHRGYHSVSLAVIGAALGRLCAV 138
[Close]
BLAST of Ggra823.t1 vs. uniprot
Match: A0A2V3IRS2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRS2_9FLOR)

HSP 1 Score: 128 bits (321), Expect = 2.310e-35
Identity = 66/137 (48.18%), Postives = 90/137 (65.69%), Query Frame = 0 
Query:    1 MAAVFDFVSFPAFFIGFVVHMTMGMIWYSTPVFGKAFVQLALKGKMPTKPDPRAMVAAVLGTATAIPFFAFLLRVANCRGAGEGALWGLAFGVFFDSGLNASHSFFENRPFALFVLHRGYHCVSLTLVGALLGRLCG 137
            MA++F +VS PAF +  +V   +  +WYS PVFG    +LA   +   KP  + +  +V+G+  +  FF+ +L VA C+   +GALWGLA G+FFDSG+NASH FFENR F+LF+LH G H VSLT  G +L  LCG
Sbjct:    1 MASMFGYVSVPAFIVSSLVKFIVTTVWYSKPVFGTWAKRLAFGKRRRPKPSLQHLAVSVIGSIVSFSFFSTVLHVAKCQTPLDGALWGLALGLFFDSGMNASHCFFENRSFSLFLLHNGCHAVSLTTAGIVLALLCG 137
The following BLAST results are available for this feature:
BLAST of Ggra823.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IRU27.610e-7884.78Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IRS22.310e-3548.18Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013879Protein of unknown function DUF1761PFAMPF08570DUF1761coord: 12..132
e-value: 1.1E-17
score: 64.5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..53
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..73
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..106
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 138..139
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 107..117
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 74..84
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 7..28
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 116..138
NoneNo IPR availableTMHMMTMhelixcoord: 84..106
NoneNo IPR availableTMHMMTMhelixcoord: 55..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000906_piloncontigtig00000906_pilon:218033..218533 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra823.t1Ggra823.t1Gracilaria gracilis GNS1m malemRNAtig00000906_pilon 218033..218533 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra823.t1 ID=Ggra823.t1|Name=Ggra823.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=140bp
MAAVFDFVSFPAFFIGFVVHMTMGMIWYSTPVFGKAFVQLALKGKMPTKP
DPRAMVAAVLGTATAIPFFAFLLRVANCRGAGEGALWGLAFGVFFDSGLN
ASHSFFENRPFALFVLHRGYHCVSLTLVGALLGRLCGVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013879DUF1761