Ggra8227.t1 (polypeptide) Gracilaria gracilis GNS1m male
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Overview
Homology
BLAST of Ggra8227.t1 vs. uniprot
Match: A0A2V3J6J3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6J3_9FLOR) HSP 1 Score: 524 bits (1349), Expect = 1.140e-166 Identity = 346/655 (52.82%), Postives = 443/655 (67.63%), Query Frame = 0
Query: 681 MTNSRNPRRRRPSKRPQDLFNFFDEEEMKTSRSRNNXXXXXRRKHNADAIEANELDDVVDAVADDAVDDGFFSRYKKDAENGRIFDVSDLDAEAKEEFKSSSADHQTAARAFDAVDKLFGNLNAKKGDKASGSAMSDERIDKSSWLNDIKARAATSGEPERANAVDVQAFDDSSILKAVADESDFSEAKVTPDPDEKGSFSDVGQQESFPQTTRDKSSEKKESRSSTASSFERFMSFARKGPAPVQVIESKERDPRREKTNREDFRRRSRSSSLSNLLSTNRPSDRYSKATYEPADDIMAAEIEVGNASSGKRNGRRQQFSAVRRVGGKTRRILKPPREWEPIISDDVRNVRSDSRGMGGRA-RPSHLRNAVANCTSCRGSGMETCALCIGSGWVAPMKEFALLDGQERKALCEEFWSTPGLVIDSQGNAQCIRCNGIGKQFCPTCKGSGSALETGFNYNDRYEVFDNFPNVRDEAVVENDYDEXXXXXXXXXXXEDDFESFQLYQGSVDSFDLSTGKGRNDDSEDKL-EDDEVVLGVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEESEELLATLTSMDLRDQKRSDGISGVFSPLEKDGELLEDEEDEEDLDFEVEDDEFXXXXXXSEELFDLEL--DDFADGVDDVSAD 1331
MTNSRNPRRRRP++RPQD+FNFFD+E+ + R++ R+ N + +E D +D DAVDDGFFSRY K+AENGR+F+VS LDAE +EEFKSS+ DHQTAARAFDAVD+LFG++NA+K ASGS+ +D++ DKSSWL+DIKARAATSGE + A AVDVQA D+S L + DF+EA ++PDP E +S Q R+K S + S +S+F+ FM+FARKGP + +++E RED R R R S++L+ R +R S YEP DD M AEIE G+ +R+GRRQ+++AVRRVGG+TRRIL PP EW+P+ D+V VRS++R +GGR R S L+ +A+C SCRG+G ETCA+C+GSGWVAP+ E + + R+ L EEFWS P LV+D GNAQC+RCNGIGKQFC +C+GSGSAL GF+ ++RYEVFD FP+V D+AVV D DE XXXXXXXXX FESFQLYQGS D F+LSTGKGR E KL EDD+ VL VGD XXXXXXXXXXXXXXXXX A L SMDL ++K G+F+ LEK LLED++D ++ E+X + L+DLEL D++ DG ++ S+D
Sbjct: 31 MTNSRNPRRRRPNRRPQDMFNFFDDEDNSGYKQRSHKQRRPHRRRNPPVEDEDETDQDID----DAVDDGFFSRYVKEAENGRVFNVSKLDAEPREEFKSSNLDHQTAARAFDAVDRLFGSINAQKDKGASGSSTTDDKFDKSSWLDDIKARAATSGERDTAAAVDVQAVDESQSLDERVMDDDFAEAGISPDPSE---YSRSKSQ------NREKGSARGNEGSEHSSTFQTFMNFARKGPTTDREEDTREXXXXXXXXAREDIRGRPRRPPPSSVLNLGRFGERDSTDNYEPLDDEMEAEIEFGSKPK-RRSGRRQRYTAVRRVGGRTRRILNPPLEWQPMDQDEVGQVRSENRPLGGRGPRKSQLQGVIADCQSCRGAGTETCAICLGSGWVAPLNEPSGKEKTGRRELLEEFWSRPNLVVDIHGNAQCVRCNGIGKQFCGSCQGSGSALRKGFSLSERYEVFDMFPSVSDDAVV--DGDEEYXXXXXXXXXXXXFESFQLYQGSADLFNLSTGKGRTGGEESKLQEDDDDVLDVGDDEDAVVMNVEXXXXXXXXXXXXXXXXX---------AGLESMDLGEEKGRTRGEGMFTELEKSEGLLEDDDDIDEXXXXXXXXEYXESDE-GDGLYDLELEEDEYDDGFEEGSSD 659
BLAST of Ggra8227.t1 vs. uniprot
Match: A0A2V3J5R9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5R9_9FLOR) HSP 1 Score: 310 bits (794), Expect = 9.530e-92 Identity = 187/351 (53.28%), Postives = 230/351 (65.53%), Query Frame = 0
Query: 1 MASSSADFVLDEGLDEDEDVLVFQSGHHYTAPESSTTSSQHQADRTIPEPQGQPSSSTH-IDPNTPASLSSP-AVIIDGLPISSSRADLDAFLDSAPITNVRLRRLEKDGLLRVRVQFADSIAATKVLSQDGADFRGSVIAVKVATDERWEASNAEQTSR----RMQQPQTKIIPDAKQVQTGFWNAFAAAKNVAERLEKGARHLSEDLERRLQVSEKVEQTKTAIVNIDQQYGVSKTVSDVAKKGREXXXXXXXXXXXXXXXXXXXXNVSGAAGVVAREVDESFRVSDRARNVFNDAIKNDTVGNVAKGVVGALDGDTPTTKKRTQPTADEKEELP-SSEQSNSTNFEVG 344
M SS+ADFVLDEGLDEDEDVL FQS H + + Q ++ PQ PS N P +P AVIIDGLPIS+SRADLDA LD APITNVRLRRLEKD LLRVRVQF + A K L +DG DFRG+VI+VK AT+ERW+AS + R + T +PDAK VQ+GFW+AFAAAKNVAERLE+GARHL +DLERRL V+EKVEQTK AI +DQQY VSKTV ++ ++G++ +VSG A +VAREVDESFRV DRARN A++ND V VAK + LD + K ++QP +E E+ P S++ ++ +FEVG
Sbjct: 1 MTSSAADFVLDEGLDEDEDVLAFQSSLHPPPIQEKNSPPQTPSE----PPQSLPSXXXXSXXQNAPLPQDAPTAVIIDGLPISASRADLDALLDGAPITNVRLRRLEKDRLLRVRVQFEHAQTAAKALEKDGTDFRGAVISVKKATEERWQASFLDSPRHTPNPRSPRSPTLSLPDAKAVQSGFWSAFAAAKNVAERLEQGARHLGDDLERRLHVTEKVEQTKRAIDQLDQQYSVSKTVVEMTERGKQAAVQVDKSLGLSDGVNKVSTDVSGVARIVAREVDESFRVGDRARNAVQGAMQNDAVSGVAKRAMATLDRNASPGKSKSQPMTEEPEQPPPSTDDASGQHFEVG 347
BLAST of Ggra8227.t1 vs. uniprot
Match: R7QUL0 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUL0_CHOCR) HSP 1 Score: 192 bits (487), Expect = 9.270e-49 Identity = 137/348 (39.37%), Postives = 193/348 (55.46%), Query Frame = 0
Query: 931 KERDPRREKTNRE---DFRRRSRSSSLSNLLSTNRPSD-RYSKA-------TYEPADDIMAAEIEVGNASSGKRNGRRQQFSAVRRVGGKTRRILKPPREWEPIISDDVRNVRSDSRGMGG-RARPSHLRNAVANCTSCRGSGMETCALCIGSGWVAPMKEFALLDGQERKALCEEFWSTPGLVIDSQGNAQCIRCNGIGKQFCPTCKGSGSALETGFNYNDRYEVFDNFPNVRDEAVVENDYDEXXXXXXXXXXXEDDFESFQLYQGSVDSFDLS-TGKGRNDDSEDKLE-DDEVVLGVGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEESEELLATLTSMDLRD 1264
K ++P+ KT RE D R +S++S +L + D R + A +YE DD M I + + K + RRQ+F+AVRRV ++ +I KPP EW+P+ +++ VRSD R +GG R S + VANC +CRGSG++TC+ C+GSGWV P+ + + + RK L E+ W+ P L +D+ G AQCI CNGIGKQFC +CKGSGSAL GF+ +++ E+FD D++ + D XXXXXXXXXXX QLY G +SF+ T N ++ D E DD++ +G D +ES ELLATL +M L D
Sbjct: 40 KRKEPQERKTTREPRIDEGRAPPASNISRILGLTKQIDSRRADAPREKDDDSYEALDDEMEESISIRGDAVRKGSLRRQKFTAVRRVANRSFKIHKPPDEWKPMTEEEIAKVRSDGRSIGGGRVGSSKGKGIVANCQTCRGSGLDTCSACLGSGWVPPLDKIGM--SESRKELLEKIWNRPNLCVDNYGEAQCILCNGIGKQFCDSCKGSGSALRKGFSLSEKREIFDFDDPEEDDSCLGEDXXXXXXXXXXXXXXXXXXXXXQLYTGPEESFNFHRTSTSFNSETGDGDESDDDLRIGNEDELEVD------------------------DESAELLATLEAMHLAD 361
BLAST of Ggra8227.t1 vs. uniprot
Match: R7QRC8 (RRM domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QRC8_CHOCR) HSP 1 Score: 167 bits (423), Expect = 1.330e-41 Identity = 124/361 (34.35%), Postives = 178/361 (49.31%), Query Frame = 0
Query: 1 MASSSADFVLDEGLDEDEDVLVFQSGHHYTAPESSTTSSQHQADRTIPEPQGQPSSSTHIDPNTPASLSSP--AVIIDGLPISSSRADLDAFLDSA--PITNVRLRRLEKDGLLRVRVQFADSIAATKVLSQDGADFRGSVIAVKV--ATDERWEASNAEQTSR-----RMQQPQTKI---IPDAKQVQTGFWNAFAAAKNVAERLEKGARHLSEDLERRLQVSEKVEQTKTAIVNIDQQYGVSKTVSDVAKKGREXXXXXXXXXXXXXXXXXXXXNVSGAAGVVAREVDESFRVSDRARNVFNDAIKNDTVGNVAKGVVGALDGDTPTTKKRTQPTAD----EKEELPSSEQSNSTNFEV 343
MA +DFVLDEGLD+DED+L F S + T+ P+P P+ VIIDG+P +SSR DLDAF + I +++LRR+E +LR R++F AA L +DG F S +AV V A+ ERW Q + P I +PD V +GFW+AF+AA+ ERLE+ A L E LE +L +SEKV++T+ A+V +D++ VS+ V +A G+ +V AA +A EVDE F +S++AR N A++NDTVG + +V G TPT + P D +K PS + N+ ++
Sbjct: 1 MAQEFSDFVLDEGLDDDEDILAFHSNRQRGGGGYAETAG-------TPQPNASPTXXXXXXXXXXXXXXXXXTTVIIDGMPPTSSRPDLDAFFSACGGKILSLQLRRIEASNILRARIKFDSEEAAASALQRDGQVFPRSDLAVSVKPASMERWNDGCGSQRGNGAPGATLTSPTNSIMQMLPDTNAVTSGFWSAFSAARXXXERLEEKATKLGEQLEEKLHLSEKVDETRDALVEVDRKLQVSEKVGKMAVAGKSAAQGIDETYGISKQVGKVAADVGSAARTMASEVDEDFHLSEKARVATNLALQNDTVGPAVRSIVDNF-GATPTGEAAPSPRKDGVRRKKNYQPSGVEQNAVQTQL 353 The following BLAST results are available for this feature:
BLAST of Ggra8227.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Ggra8227.t1 ID=Ggra8227.t1|Name=Ggra8227.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=1361bpback to top |