Ggra8184.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8184.t1
Unique NameGgra8184.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length386
Homology
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BLAST of Ggra8184.t1 vs. uniprot
Match: A0A2V3ICV1 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICV1_9FLOR)

HSP 1 Score: 400 bits (1029), Expect = 8.170e-136
Identity = 187/307 (60.91%), Postives = 242/307 (78.83%), Query Frame = 0 
Query:   76 LKKLNPKELKWSEIPFASVEEELNAIDEYEREEDLEPDSVWPKFLRGAAYEHWGQPHLALAQYSKVIAGTELSKVPELWERKAYNSFKIGKVGEANAYCDVALTIYGQSVGNELHFAHWFNANFQDYIPKWNGPHANIQRGIIKYCVGNDKTSRECLVSQIALQGEELEHAILWFLAASVRAATDGIARDWDMKMVRSALGAEYDWDPRLLLFVDLFVAHASGVFGDVTEIEEKLSNELKNDEGGDIVTKMYIALYHDAFTRDHVERDRALDEVVALGGSKNQNDLENFMFCVAKNRLSATSSAESN 382
            ++KL P +L W+EIPF+S++EEL+AIDEYEREEDL+  S WPKFLRGAAYE+WGQP+LALAQY+ + AGT L KVPELWERKAYN FKIG V +A+A+ D+A+ +Y  SVGNELHF HWF  +F+DY+PKWNGP A +QRGI KYC+G  K +RE  V+QI ++ E +EHA+LWFLAAS ++ TD    + D+K+V S +  ++DW+PRL LF+DL++A+A+GVFG V E+EE+LSN +K D   DIVTK+YIALYHDAFT+D  ERDRALDE+ A+G +  QND ENF+F  A NR SA    +S+
Sbjct:   40 IEKLTPNKLTWAEIPFSSLQEELDAIDEYEREEDLDRGSSWPKFLRGAAYEYWGQPNLALAQYATIEAGTNLLKVPELWERKAYNCFKIGNVMQASAFFDIAINLYNLSVGNELHFVHWFYRHFKDYVPKWNGPPAPVQRGICKYCMGMSKIARESFVAQIVMKKEGMEHALLWFLAASYKSHTDEAVLECDLKIVHSTISEQFDWNPRLRLFIDLYLAYANGVFGRVAELEEELSNAVKKDGSDDIVTKVYIALYHDAFTKDESERDRALDELSAVGTTSKQNDTENFLFHTAVNRFSAPGKEKSD 346
The following BLAST results are available for this feature:
BLAST of Ggra8184.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ICV18.170e-13660.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 87..264
e-value: 5.5E-6
score: 27.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 99..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000872_piloncontigtig00000872_pilon:56639..57796 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8184.t1Ggra8184.t1Gracilaria gracilis GNS1m malemRNAtig00000872_pilon 56639..57796 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8184.t1 ID=Ggra8184.t1|Name=Ggra8184.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=386bp
MHSPSAFISPISISTSSIAATPVQSSSASPWIAPFPQRSTPRCVRRKKAA
IVRLSAANEAPDESLTGEEEEHQELLKKLNPKELKWSEIPFASVEEELNA
IDEYEREEDLEPDSVWPKFLRGAAYEHWGQPHLALAQYSKVIAGTELSKV
PELWERKAYNSFKIGKVGEANAYCDVALTIYGQSVGNELHFAHWFNANFQ
DYIPKWNGPHANIQRGIIKYCVGNDKTSRECLVSQIALQGEELEHAILWF
LAASVRAATDGIARDWDMKMVRSALGAEYDWDPRLLLFVDLFVAHASGVF
GDVTEIEEKLSNELKNDEGGDIVTKMYIALYHDAFTRDHVERDRALDEVV
ALGGSKNQNDLENFMFCVAKNRLSATSSAESNAFE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf