Ggra817.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra817.t1
Unique NameGgra817.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length407
Homology
[Close]
BLAST of Ggra817.t1 vs. uniprot
Match: A0A2V3IK93 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IK93_9FLOR)

HSP 1 Score: 249 bits (635), Expect = 1.440e-74
Identity = 146/292 (50.00%), Postives = 180/292 (61.64%), Query Frame = 0 
Query:    1 MLHSLKKHAFRLQVPLRAELSPDSESQQLRHHLRQMRRQLQHLLHVQRASGALWLRLLHNQRDFSQRMALAYPNRDALWAVCAALRADSSALAERFGTDARRDGALLSHVRAQLLRYVRLIAAVEARYARLDALRAEAARYQRKVDALATRTPSSSPAVXXXXXXXXXXXXXXXXXXXXXXGADAAHEALKARNVAKLQRATAEHERMQRDVLTRQRKLFDVHAALFHAALVAFWVAHGGAVDAVAASVGRARRFVQHEQHKVATLDVERLVEMADGDKAVSAHVGMSDLHA 292
            MLHS+KK  FRLQVPLR  L+P SE Q LRH LRQ+R  LQHLLHV RA  A+WLRLLHN RDFS+RM LAYPN D L  VCA LR  ++ +A++F  + R     L+H+RAQ+  Y+R I  VE  Y  LD   AE  RY++KVDAL+TR  SSS                               +A  +RN AKL RA   H+R+  DVL RQRKLF VHA LFHAALVAFW++H   VDA+  SV  A++F + E   +  LDV+RL++ ADGD  VS H G+  + A
Sbjct:    1 MLHSIKKRVFRLQVPLRPSLTPGSEGQHLRHQLRQIRLALQHLLHVHRAGAAVWLRLLHNHRDFSERMHLAYPNNDRLAQVCARLRKQTAHIADQFAREQRPLSPTLAHIRAQIELYIRRIIDVETLYPALDDAHAEYYRYKQKVDALSTRDASSSALPLSPRRPPD--------------------QARNSRNFAKLDRAEELHQRLLADVLQRQRKLFAVHAPLFHAALVAFWLSHASCVDALVESVQHAKQFAEAELDNMEQLDVQRLIDGADGDLPVSPHAGLDHMAA 272
The following BLAST results are available for this feature:
BLAST of Ggra817.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IK931.440e-7450.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 124..151
NoneNo IPR availableCOILSCoilCoilcoord: 291..319
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 330..344
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 282..364
IPR027267AH/BAR domain superfamilyGENE3D1.20.1270.60Arfaptin homology (AH) domain/BAR domaincoord: 11..262
e-value: 9.3E-32
score: 112.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000906_piloncontigtig00000906_pilon:172989..174209 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra817.t1Ggra817.t1Gracilaria gracilis GNS1m malemRNAtig00000906_pilon 172989..174209 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra817.t1 ID=Ggra817.t1|Name=Ggra817.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=407bp
MLHSLKKHAFRLQVPLRAELSPDSESQQLRHHLRQMRRQLQHLLHVQRAS
GALWLRLLHNQRDFSQRMALAYPNRDALWAVCAALRADSSALAERFGTDA
RRDGALLSHVRAQLLRYVRLIAAVEARYARLDALRAEAARYQRKVDALAT
RTPSSSPAVAAAASAWWTRRGGGGAVHDDDDGADAAHEALKARNVAKLQR
ATAEHERMQRDVLTRQRKLFDVHAALFHAALVAFWVAHGGAVDAVAASVG
RARRFVQHEQHKVATLDVERLVEMADGDKAVSAHVGMSDLHALAHDDAQQ
QEEEENEQEEEEEEEDDDDKHKQTQQRERKALGSRSSSSAATAAAAAAGT
GAQGEVAASVEVREVHHIISRASMDECALSPVGVQHTLSHGGDGEQAAAR
AKAAGA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027267AH/BAR_dom_sf