Ggra8119.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8119.t1
Unique NameGgra8119.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length350
Homology
BLAST of Ggra8119.t1 vs. uniprot
Match: A0A2V3ID75 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID75_9FLOR)

HSP 1 Score: 123 bits (309), Expect = 4.240e-30
Identity = 80/202 (39.60%), Postives = 103/202 (50.99%), Query Frame = 0
Query:  140 AKTYPVVPLLEKSLAYRLQLLRLNTNDNMGMSELVPFTLLRLRLDGRCVAFIAHWLRVITGGPDPPS---QHETPQRDDWLYGEADPCDDVFPQVGMPPEDAP---VPLLIALCIVKLRLVANMEDG----ESFR-------------------------------EQQRLADAYLHALHRRNDSLLPALINPAPLRERQAP 300
            A  Y V PLL K+L +RL+LLRL  +DN+G+ ++VPFTLLRL  D RC AFI HW+R ++      S    HE     DWLYG AD   DVF  V  P  D     + LLIALCI+KLR++A  +D     ESF+                               EQ+R  + Y    H +N +L PA+INP PL+    P
Sbjct:    2 AHWYEVAPLLNKALTHRLELLRLILSDNLGLRDVVPFTLLRLNQDARCAAFITHWMRRLSTQDTEESIDALHEQSTECDWLYGSADCYADVFETV--PDADHGYDCIALLIALCIIKLRIIAKHDDNRRQMESFQTTSDASQLDDDSARLIAQPVAGNETQAARVAEQERHVERYFDITHAQNPTLFPAIINPRPLKSCATP 201          
BLAST of Ggra8119.t1 vs. uniprot
Match: A0A1Z5K5I6 (MYND-type domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K5I6_FISSO)

HSP 1 Score: 126 bits (316), Expect = 1.710e-29
Identity = 102/339 (30.09%), Postives = 151/339 (44.54%), Query Frame = 0
Query:   48 LKACSRCRLARYCHIDCQRRDF-AAHKKECKRFCTLRCALRQSTASFESHVDTRVSVHPRNLFEEARGRFYDVPGAREHC---RKLAELGHELEEFAKTYPVVPLLEKSLAYRLQLLRLNTNDNMGMSELVPFTLLRLRLDGRCVAFIAHWLRVITGGP----DPPSQHETPQRDDWLYGEADPCD--DVFPQ-VGMPPEDAPVPLLIALCIVKLRLVANME-------------DGESFRE-------------------QQRLADAYLHALHRRNDSLLPALINPAPLRERQAPVLKKIGGPSESYFALLSCYDLFVAVPGAVDRLIRRFGPDPQYD 343
            L  CSRC+ A YC  +CQ  D+ ++HK  C         + Q T    S +   V + P+N F    G F     A E+    R L +L  +    A+T  V    E++L++ L+L+RL+  D +G   ++PF LL L  D     FI +W ++         D  ++H   Q  DW+Y     C   DVF +   +  + AP+P L+AL I+K R+VA  +             +G+  +E                   Q++     L  +HRRN  +LPA +NP PL  +     K    P+E+   LL     FV VPGA   L  RFG +P YD
Sbjct:   49 LMCCSRCKTAWYCSKECQLADYESSHKSLCVSIARTLKRVEQLTVPLRSTI-IDVFLEPQNFFVSQVGLFGQFYQAHEYLTARRYLVDLYVQAAHIAETKSV---WERALSHALELMRLDYRDVVGTRSVIPFILLNLNRDDDAFDFIRYWTKIDLDDRSKLFDLMNRHFVSQEGDWIYPRNQNCRFMDVFEECANVTDQKAPLPFLVALLIIKCRIVATYDTTCESMDLAFGTPNGQRIQEVQSAVKELILDEALMNIQSQRQQVQRLLIVIHRRNAIILPAFLNPTPLLTK-----KWQNEPNEALLVLLHGAGCFVCVPGAKPLLEERFGKEPFYD 378          
BLAST of Ggra8119.t1 vs. uniprot
Match: A0A1Z5JJZ7 (MYND-type domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JJZ7_FISSO)

HSP 1 Score: 120 bits (301), Expect = 1.550e-27
Identity = 101/354 (28.53%), Postives = 147/354 (41.53%), Query Frame = 0
Query:   33 CKACNRKGDPSQGRALKACSRCRLARYCHIDCQRRDFAA-HKKECKRFCTLRCALRQSTASFESHV---DTRVSVHPRNLFEEARGRFYDVPGAREHCRKLAELGHELEEFAKTYPVVPLLEKSLAYRLQLLRLNTNDNMGMSELVPFTLLRLRLDGRCVAFIAHWLRVITGGPDPPS----QHETPQRDDWLYGEADPCD---DVFPQVG-MPPEDAPVPLLIALCIVKLRLVANMED-------------GESFREQQRLADAY---------------LHALHRRNDSLLPALINPAPLRERQAPVLKKIGGPSESYFALLSCYDLFVAVPGAVDRLIRRFGPDPQYDCEM 346
            C  C R   PS    L  C+RC++A YC+  CQ+  +   H+  C              A F+ +V   + R+     ++F  + G  +       +      L     + A    V  + EK+L + L+ LRL   D  G    VPF LL L  D   + FI +W++V     D P      HE  +  DW+YG  +      D+F  V    P +  VP L+AL I+KLR+VA  +              G     Q  + D                 L A+   N S+LPA++NP PL ++  P     G PSE++  L+ C   F  VPGA   L  R G +P YD +M
Sbjct:   19 CTHCQR--TPST--KLLRCTRCKVAWYCNRTCQKEHYRQMHRSLCL-----------GIAEFQQYVQEEEERIRA-VEDVFVTSTGDLWGYAETTAYMEATYALSDLYWQAAYQCEVKEVWEKALYHLLEHLRLGAIDTKGARARVPFVLLALNRDDEALTFIQYWVQVDLATEDDPEIIFRAHENTKEGDWIYGPVEKDGRYLDIFQVVSDADPNEVEVPFLVALAIMKLRIVAAYDTAIQSLRLAMTGTAGRVHEVQSAIQDMLIRGDLQSQWEQLIRLLDAIDHLNPSMLPAILNPKPLFQQPPPTQIMPGHPSEAFRTLMDCRRCFYRVPGAAALLRNRLGENPTYDSDM 356          
BLAST of Ggra8119.t1 vs. uniprot
Match: A0A1Z5K6I8 (MYND-type domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K6I8_FISSO)

HSP 1 Score: 104 bits (259), Expect = 1.270e-21
Identity = 96/324 (29.63%), Postives = 138/324 (42.59%), Query Frame = 0
Query:   48 LKACSRCRLARYCHIDCQRRDFAAHKKECKRFCTLRCALRQSTASFESHVDTRVSVHPRNLFEEARGRFYDV-PGAREHCRKLAELGHELEEFAKTYPVVPLLEKSLAYRLQLLRLNTNDNMGMSELVPFTLLRLRLDGRCVAFIAHWLR---VITGGPDPP-SQHETPQRDDWLYGEADPCD--DVFPQV-GMPPEDAPVPLLIALCIVKLRLVANMED-------------GESFRE------------------QQRLADAYLHALHRRNDSLLPALINPAPLRERQAPVLKKIGGPSESYFALLSCYDLFVAVPGAVDRL 332
            L  CSRC +A YC   CQ+   A HKK   RF  +   + + T   +   +   +    N+FE   G F+ + P    +      L +     A    V  + EK+L ++L+ L+L   D M     VPF LL +  D     FI +W+    V+   PD    +H   +  DWLY         D+F QV G   ++  +P L+AL ++KLR+VA+ +D             G+  +E                  Q+R     L  +HRRN  +LP L NPAP   R  P  +  G PSE    LL C   F  VP A + L
Sbjct:   26 LLRCSRCHVAWYCTPTCQK---AHHKKH--RFLCME--IDKYTKLVDDEGNRLCAALGANIFETEIGNFWGLLPATATYMDLTNALANWYSSLALECNVKEVWEKALYHQLEHLQLGVLDRMDARLRVPFFLLYMNRDDDAFTFIRYWVETKEVLETNPDAVFERHRNSKSGDWLYPRETDARYLDIFDQVPGDLIQEMELPFLVALFLIKLRIVASHDDATESMDIAFKTTGGQRIQEVQSAIAEMLVRQDVDAENQRRQIYWLLFLIHRRNPHMLPGLTNPAPYFNRPPPTDRIAGEPSEVSMCLLDCKVAFYRVPAAPEIL 342          
BLAST of Ggra8119.t1 vs. uniprot
Match: A0A1Z5KN12 (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KN12_FISSO)

HSP 1 Score: 97.1 bits (240), Expect = 3.010e-19
Identity = 76/279 (27.24%), Postives = 118/279 (42.29%), Query Frame = 0
Query:  105 PRNLFEEARGRFYDVPGAREHCRKLAELGHELEEFAKTYPVVPLLEKSLAYRLQLLRLNTNDNMGMSELVPFTLLRLRLDGRCVAFIAHWLRVITGGPDP-----PSQHETPQRDDWLYGEADPCD--DVFPQVGMPPE-DAPVPLLIALCIVKLRLVANME------------------------------DGESFR--EQQRLADAYLHALHRRNDSLLPALINPAPLRERQAPVLKKIGGPSESYFALLSCYDLFVAVPGAVDRLIRRFGPDPQYD 343
            P++LF+   G F        + +   EL   L + A    +  + EK+L + L++LRL+        +  PF LL +  D     F+ HW+++     D      P   E+ +  DW+Y     C   D+F       + +A +  L+AL I+K R+VA  +                              D   F    Q+   +  L+A+HR N ++LPA++NPAPL     P  +  G PSE    L  C    + VPGA + L +RFG  P YD
Sbjct:   28 PQDLFDIQSGLFSQWEETFSYMKTRCELAENLTKAAYLGEIKAVGEKALIHFLEILRLDARGPQTFLDTAPFLLLHVHRDDDAFDFMRHWMKMHPINDDKITDTMPRYFES-KEGDWMYPREKNCRYRDMFEDCPNVSDCEAHLSFLVALLIIKCRIVATYDATYRSIDIAFATSAGKRIQAVQCAVTDMLIDRRLFNIDSQRHQVEHLLNAIHRNNPTMLPAILNPAPLLTGYLPRNRVRGDPSEVVSILFDCGRCLLRVPGAQEMLEKRFGKSPSYD 305          
BLAST of Ggra8119.t1 vs. uniprot
Match: A0A6A6E9P5 (MYND-type zinc finger protein samB (Fragment) n=1 Tax=Zopfia rhizophila CBS 207.26 TaxID=1314779 RepID=A0A6A6E9P5_9PEZI)

HSP 1 Score: 63.9 bits (154), Expect = 2.310e-8
Identity = 58/222 (26.13%), Postives = 93/222 (41.89%), Query Frame = 0
Query:   33 CKACNRKGDPSQGRALKACSRCRLARYCHIDCQRRDFAAHKKECKRFCTLRCALRQSTASFESHVDTRVSVHPRNLFEEARGRFYDVPGAREHCRKLAELGHELEEFAKTYPVVPLLEKSLAYRLQLLRLNTNDNMGMSELVPFTLLRLRLDGRCVAFIAHWLRVITGGPDPPSQHETPQRDDWLYGEADPCDDVFPQVGMPPEDAPVPLLIALCIVKLRLV 254
            C  CN K D      L+ CS C++ +YC  + Q     +HK  C        A+++S  + +            N+FE+  GRF    G  E  +   E   +L E          ++ +L + +++L+L+ ND M MS+ +P  LLRLR D  C  F+    R      + P+       +        P D   P +        +  LIAL ++KLR+V
Sbjct:    5 CPPCNTKDD------LRRCSGCKVMQYCGQEHQISHRQSHKSACN-------AIKRSQQTLDEEGQKICEHSSGNMFEKEFGRF----GTMELAQPYLEARVKLVEEVLRINTPLAIDTALNHAMEMLQLDHNDTMRMSDWIPALLLRLRWDQDCYDFLKSCARTTQSLSNTPTTRSVDAFE--------PLDRFCPDLS----GLSLSQLIALTLLKLRMV 197          
BLAST of Ggra8119.t1 vs. uniprot
Match: A0A7C8J054 (MYND-type zinc finger protein samB n=1 Tax=Xylaria multiplex TaxID=323545 RepID=A0A7C8J054_9PEZI)

HSP 1 Score: 65.9 bits (159), Expect = 3.130e-8
Identity = 62/213 (29.11%), Postives = 95/213 (44.60%), Query Frame = 0
Query:   48 LKACSRCRLARYCHIDCQRRDFAAHKKECKRFCTLRCAL-RQSTASFESHVDTRVSVHPRNLFEEARGRFYDVPGAREHCRKLAELGHELEEFAKTYPVVPLLEKSLAYRLQLLRLNTNDNMGMSELVPFTLLRLRLDGRCVAFIAHWLRVITGGPDPPSQHETPQRDDWLYGEADPCDDVFPQVGMPPEDAPVPLLIALCIVKLRLVANMED 259
            L  C+ CR  RYC  + Q      HK +C +  + R  L R+      + VD      P N FE   G F+ +   R++ R    L   L        V     + L +   +LRL  +DNMG+ ++VPFT+LRL LD     FI  W+     G         P  +  ++G AD  +D    +G   E + +   IAL I+KL+L+ ++ +
Sbjct:   34 LLRCAGCRAFRYCSREHQVAHRPQHKSDCTKIKSARAKLDREDRKVRNATVDFMT---PANAFETHVGHFWGLLNTRDYMRARFGLARPLFVLGTLDSV----SEGLEHVRDMLRLCRSDNMGLRDIVPFTMLRLDLDQEAYDFIKWWVTCDPDGTYNWGDMTLPYLN--IHG-ADVLEDPSFLLG---EYSSLNFTIALLILKLKLLVDIRN 233          
The following BLAST results are available for this feature:
BLAST of Ggra8119.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3ID754.240e-3039.60Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1Z5K5I61.710e-2930.09MYND-type domain-containing protein n=1 Tax=Fistul... [more]
A0A1Z5JJZ71.550e-2728.53MYND-type domain-containing protein n=1 Tax=Fistul... [more]
A0A1Z5K6I81.270e-2129.63MYND-type domain-containing protein n=1 Tax=Fistul... [more]
A0A1Z5KN123.010e-1927.24Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A6A6E9P52.310e-826.13MYND-type zinc finger protein samB (Fragment) n=1 ... [more]
A0A7C8J0543.130e-829.11MYND-type zinc finger protein samB n=1 Tax=Xylaria... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 33..76
e-value: 5.8E-7
score: 29.5
IPR002893Zinc finger, MYND-typePROSITEPS01360ZF_MYND_1coord: 33..76
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 33..76
score: 10.807594
NoneNo IPR availableGENE3D6.10.140.2220coord: 31..79
e-value: 4.1E-10
score: 41.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 31..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000118_piloncontigtig00000118_pilon:80848..81897 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8119.t1Ggra8119.t1Gracilaria gracilis GNS1m malemRNAtig00000118_pilon 80848..81897 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8119.t1 ID=Ggra8119.t1|Name=Ggra8119.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=350bp
MPSPTKIQVEAEAPSPPSPPPPPPTAPSATWFCKACNRKGDPSQGRALKA
CSRCRLARYCHIDCQRRDFAAHKKECKRFCTLRCALRQSTASFESHVDTR
VSVHPRNLFEEARGRFYDVPGAREHCRKLAELGHELEEFAKTYPVVPLLE
KSLAYRLQLLRLNTNDNMGMSELVPFTLLRLRLDGRCVAFIAHWLRVITG
GPDPPSQHETPQRDDWLYGEADPCDDVFPQVGMPPEDAPVPLLIALCIVK
LRLVANMEDGESFREQQRLADAYLHALHRRNDSLLPALINPAPLRERQAP
VLKKIGGPSESYFALLSCYDLFVAVPGAVDRLIRRFGPDPQYDCEMHMW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND