Ggra8092.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8092.t1
Unique NameGgra8092.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length230
Homology
BLAST of Ggra8092.t1 vs. uniprot
Match: A0A2V3IYE7 (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYE7_9FLOR)

HSP 1 Score: 200 bits (508), Expect = 6.170e-61
Identity = 95/167 (56.89%), Postives = 122/167 (73.05%), Query Frame = 0
Query:   15 AITEAQRYRGHWQKTWRVPSTAFRSANLGFAFSGYSNVRTALSESRTVYKNLEGSKIITIGGGNYNGGWTRRTIRDVNRAIQKGYFRNYRGIAYDIEQGDPGLTGMFLSSFKRAKRAGLFVIVTVSHTAPYGFTDATTIVNGLLRSRYIDIISPMMYKSGEGYRLPS 181
            A +  + +RGHW+KTW V ST F SAN GFAFSG+ +V  AL +S  V++NLEG KI+TIGGGN NG WTRR IR +N+AI+ G   +Y GIAYDIE+G  GLTG FL SF  AKR G FV+VTVS TAPYG  DA  ++  ++ SR++D+ISP+MY SG+ ++  S
Sbjct:   18 ARSHHKTFRGHWEKTWDVSSTQFDSANFGFAFSGHVDVSRALRDSNAVFRNLEGKKILTIGGGNSNGAWTRRYIRKLNKAIRSGSLNSYHGIAYDIEEGQSGLTGDFLRSFWEAKRHGFFVLVTVSKTAPYGIRDARRLMWNIIHSRHVDVISPIMYPSGQNFQQCS 184          
BLAST of Ggra8092.t1 vs. uniprot
Match: A0A836CN73 (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN73_9STRA)

HSP 1 Score: 145 bits (365), Expect = 2.490e-39
Identity = 70/152 (46.05%), Postives = 101/152 (66.45%), Query Frame = 0
Query:   23 RGHWQKTWRVPSTAFRSANLGFAFSGYSNVRTALSESRTVYKNLEGSKIITIGGGNYNGGWTRRTIRDVNRAIQKGYFRNYRGIAYDIEQGDPGLTGMFLSSFKRAKRAGLFVIVTVSHTAPYGFTDATTIVNGLLRSRYIDIISPMMYKSG 174
            +G++ +TW+    A    NLG AF G+++V  AL++++ VY NL GSK + IGGG+ NG WT  +I  +N  + K     Y G+ YDIE+GD GL+  F +SF +AK AGL V+VT+SH+ PYGF+DA TI+N +  S  +D +SP +Y SG
Sbjct:   41 KGYYDQTWQ-QRAAPSGTNLGVAFGGWADVDQALADAQQVYNNLVGSKYLDIGGGDSNGRWTSNSITKLNNGLGKIKSAGYVGVCYDIEEGDAGLSTAFANSFAKAKAAGLKVLVTISHSQPYGFSDAATIMNTMFASASVDYVSPQLYTSG 191          
BLAST of Ggra8092.t1 vs. uniprot
Match: A0A853HYY9 (LysM peptidoglycan-binding domain-containing protein n=1 Tax=Endozoicomonas sp. SM1973 TaxID=2751884 RepID=A0A853HYY9_9GAMM)

HSP 1 Score: 146 bits (368), Expect = 9.510e-39
Identity = 72/152 (47.37%), Postives = 97/152 (63.82%), Query Frame = 0
Query:   24 GHWQKTWRVPSTAFRSANLGFAFSGYSNVRTALSESRTVYKNLEGSKIITIGGGNYNGGWTRRTIRDVNRAIQKGYFRNYRGIAYDIEQGDPGLTGMFLSSFKRAKRAGLFVIVTVSHTAPYGFTDATTIVNGLLRSRYIDIISPMMYKSGE 175
            G++  TW  P++    ANLG AFSG+ + + ALS+S  VY +L G K I++GGGN NG WT  ++ +V  AI    F  Y GI YDIE GD GL   F  SF+ AK+  L V+VTVSH+APYG +DA+T++     S  IDI+SP +Y +G 
Sbjct:  137 GYYDWTWS-PTSPTADANLGIAFSGWVDPQQALSDSNNVYNDLAGKKYISLGGGNDNGSWTNSSLSEVTSAINNSDFSQYDGIVYDIEVGDSGLETSFKQSFQAAKKNNLSVLVTVSHSAPYGISDASTLMQSFFNSNNIDILSPQLYTTGN 287          
BLAST of Ggra8092.t1 vs. uniprot
Match: R7QQZ0 (Uncharacterized protein n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QQZ0_CHOCR)

HSP 1 Score: 142 bits (358), Expect = 4.430e-38
Identity = 75/152 (49.34%), Postives = 91/152 (59.87%), Query Frame = 0
Query:   24 GHWQKTWRVPST-AFRSANLGFAFSGYSNVRTALSESRTVYKNLEGSKIITIGGGNYNGGWTRRTIRDVNRAIQKGYFRNYRGIAYDIEQGDPGLTGMFLSSFKRAKRAGLFVIVTVSHTAPYGFTDATTIVNGLLRSRYIDIISPMMYKSG 174
            G++  TW  P T    SA +  AFSG++N RTAL  S+ VY  L+G K I  GGG   G +TR  I  +N AI  G    Y GI YD+E GD GL G F  SF  AK  G  V+VTVSH+APYG  DA T+++  L SR ID ISP +Y SG
Sbjct:   58 GYYAWTWPYPPTPGLYSATMSVAFSGWTNARTALDRSKKVYPTLKGDKYIAFGGGTEPGRFTRAGITSINAAISGGLLSGYSGIVYDVEAGDSGLRGDFARSFALAKSYGFSVVVTVSHSAPYGIGDAGTLMDSFLSSRNIDYISPQLYTSG 209          
BLAST of Ggra8092.t1 vs. uniprot
Match: A0A1B7UZ99 (Uncharacterized protein n=1 Tax=Anabaena sp. LE011-02 TaxID=1710892 RepID=A0A1B7UZ99_9NOST)

HSP 1 Score: 139 bits (349), Expect = 2.380e-37
Identity = 68/153 (44.44%), Postives = 95/153 (62.09%), Query Frame = 0
Query:   22 YRGHWQKTWRVPSTAFRSANLGFAFSGYSNVRTALSESRTVYKNLEGSKIITIGGGNYNGGWTRRTIRDVNRAIQKGYFRNYRGIAYDIEQGDPGLTGMFLSSFKRAKRAGLFVIVTVSHTAPYGFTDATTIVNGLLRSRYIDIISPMMYKSG 174
            YRG+W++TW   S     AN+G AFSG++    AL  S  V  +L G K I++GGGN NG +T   ++ +  AIQ G F  Y+GIAYD+E+GD GL  +F  SF  A+ A   V+VTVSH+APYG TDA  ++      + I+ +SP +Y +G
Sbjct:    4 YRGYWRRTWE-QSGDLPDANIGIAFSGWAAWENALQGSANVIGSLRGDKYISLGGGNANGRFTSSLLQAITTAIQSGQFAEYQGIAYDVEEGDSGLEQVFRDSFAAARAANFKVLVTVSHSAPYGITDALQLMMSFFNDQNINFLSPQLYTNG 155          
BLAST of Ggra8092.t1 vs. uniprot
Match: A0A1U9JM14 (Uncharacterized protein n=1 Tax=Aquaspirillum sp. LM1 TaxID=1938604 RepID=A0A1U9JM14_9NEIS)

HSP 1 Score: 140 bits (353), Expect = 1.310e-36
Identity = 69/152 (45.39%), Postives = 94/152 (61.84%), Query Frame = 0
Query:   24 GHWQKTWRVPSTAFRSANLGFAFSGYSNVRTALSESRTVYKNLEGSKIITIGGGNYNGGWTRRTIRDVNRAIQKGYFRNYRGIAYDIEQGDPGLTGMFLSSFKRAKRAGLFVIVTVSHTAPYGFTDATTIVNGLLRSRYIDIISPMMYKSGE 175
            G+W  +W   S A   ANLG AFSG+ +   ALS S  V   L+G K I +GGGN +G W+   +  V +AI+   F  Y GIAYDIE+G  GL   F +SF  AK  G+ V+VTVSH+ PYG TDA +++N    +R ID++SP +Y +G+
Sbjct:  131 GYWCWSWDAGS-APAGANLGIAFSGWVSPDEALSNSLAVVNQLQGKKFICLGGGNSSGAWSNDAVNAVTQAIEANRFAGYHGIAYDIEEGSAGLEAQFAASFAAAKAKGMTVLVTVSHSCPYGITDAVSLMNSFFANRDIDLLSPQLYTTGQ 281          
BLAST of Ggra8092.t1 vs. uniprot
Match: LysM domain-containing protein n=1 Tax=Undibacterium umbellatum TaxID=2762300 RepID=UPI00164AF8C8 (LysM domain-containing protein n=1 Tax=Undibacterium umbellatum TaxID=2762300 RepID=UPI00164AF8C8)

HSP 1 Score: 140 bits (352), Expect = 2.040e-36
Identity = 69/153 (45.10%), Postives = 90/153 (58.82%), Query Frame = 0
Query:   23 RGHWQKTWRVPSTAFRSANLGFAFSGYSNVRTALSESRTVYKNLEGSKIITIGGGNYNGGWTRRTIRDVNRAIQKGYFRNYRGIAYDIEQGDPGLTGMFLSSFKRAKRAGLFVIVTVSHTAPYGFTDATTIVNGLLRSRYIDIISPMMYKSGE 175
            +G W  TW   +    + NLG AFSG+ + +TA+  S  V+  L G K I +GGGN +G WT   +  V  AI  G    Y+GIAYDIE+G  GL   F +SF  AK  GL V+VTVSH+APYG  DA  ++     S  IDI+SP +Y +GE
Sbjct:  134 KGLWYWTWSKNTQVPDNTNLGIAFSGWVSPQTAIDNSNAVHSQLPGLKYICLGGGNESGAWTESAVLSVTNAINSGSLSAYQGIAYDIEEGSSGLAAAFEASFTAAKAKGLKVLVTVSHSAPYGIEDAAALMRSFFASPVIDILSPQLYTTGE 286          
BLAST of Ggra8092.t1 vs. uniprot
Match: A0A218QX75 (Uncharacterized protein n=2 Tax=Nostocales TaxID=1161 RepID=A0A218QX75_9CYAN)

HSP 1 Score: 136 bits (343), Expect = 2.340e-36
Identity = 69/159 (43.40%), Postives = 96/159 (60.38%), Query Frame = 0
Query:   16 ITEAQRYRGHWQKTWRVPSTAFRSANLGFAFSGYSNVRTALSESRTVYKNLEGSKIITIGGGNYNGGWTRRTIRDVNRAIQKGYFRNYRGIAYDIEQGDPGLTGMFLSSFKRAKRAGLFVIVTVSHTAPYGFTDATTIVNGLLRSRYIDIISPMMYKSG 174
            + E    +G+W KT+  PS  F  A LG AFSG++N   ALS+S  +   L G K I++GGGN NG +T+  +  +   I+ G F +YRGIA+DIE+G+  LT  F  +F  AK   L V+VT SH+APYG  DA  ++    R+  ID +SP +Y SG
Sbjct:    7 LEEMNLIKGYWDKTYS-PSHPFDHATLGIAFSGWANPDKALSDSAEIKNRLVGHKYISLGGGNNNGSFTQEILHSIITHIKNGKFSDYRGIAFDIEEGEANLTSHFEHAFTAAKNKNLKVLVTTSHSAPYGIPDAQMMMKNFFRNENIDYLSPQLYTSG 164          
BLAST of Ggra8092.t1 vs. uniprot
Match: Q2W0C5 (Uncharacterized protein n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) TaxID=342108 RepID=Q2W0C5_MAGSA)

HSP 1 Score: 139 bits (349), Expect = 4.980e-36
Identity = 74/170 (43.53%), Postives = 100/170 (58.82%), Query Frame = 0
Query:   24 GHWQKTWR--VPSTAFRSANLGFAFSGYSNVRTALSESRTVYKNLEGSKIITIGGGNYNGGWTRRTIRDVNRAIQKGYFRNYRGIAYDIEQGDPGLTGMFLSSFKRAKRAGLFVIVTVSHTAPYGFTDATTIVNGLLRSRYIDIISPMMYKSGEGYRLPSYHLYGGRIIT 191
            G+W++TW   VP +    A LG AFSG+++  +AL++S      LEG K IT+GGGN NG +T + +  +N AI  G F  Y GIAYDIE GD GL   F  +F  AK  G  V+VTVSHTAPYG  DA T++    +   ID +SP +Y +G+      Y +  G  +T
Sbjct:  128 GYWRRTWGACVPPSG---ATLGLAFSGWADPASALADSAAALSGLEGVKYITLGGGNDNGRFTAQDLDKINAAITGGQFAAYGGIAYDIENGDSGLASAFQGAFALAKANGFLVLVTVSHTAPYGIGDADTLMAAFFQDANIDFLSPQLYTNGDE-TANDYQITSGTTVT 293          
BLAST of Ggra8092.t1 vs. uniprot
Match: F2JYB1 (Peptidoglycan-binding lysin domain n=1 Tax=Marinomonas mediterranea (strain ATCC 700492 / JCM 21426 / NBRC 103028 / MMB-1) TaxID=717774 RepID=F2JYB1_MARM1)

HSP 1 Score: 139 bits (349), Expect = 5.420e-36
Identity = 69/152 (45.39%), Postives = 94/152 (61.84%), Query Frame = 0
Query:   24 GHWQKTWRVPSTAFRSANLGFAFSGYSNVRTALSESRTVYKNLEGSKIITIGGGNYNGGWTRRTIRDVNRAIQKGYFRNYRGIAYDIEQGDPGLTGMFLSSFKRAKRAGLFVIVTVSHTAPYGFTDATTIVNGLLRSRYIDIISPMMYKSGE 175
            G+W  TW   S    +A L  AFSG+++  TAL +S  V  +L G+K +T GGGN NG +T  +++D+  AIQ G    Y G+AYD+E+GD  L   F  SFK AK AGL V+VTVSH+APYG TDA  ++        ID++SP +Y  G+
Sbjct:  131 GYWNWTWSGTSNP-SNATLSLAFSGWTDPTTALQDSHQVKPSLVGTKYLTFGGGNDNGKFTALSLQDITSAIQSGKLEGYEGVAYDVEEGDSHLENDFAVSFKAAKDAGLKVLVTVSHSAPYGITDADALMQSFFADSNIDLLSPQLYTEGD 281          
The following BLAST results are available for this feature:
BLAST of Ggra8092.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IYE76.170e-6156.89Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A836CN732.490e-3946.05Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A853HYY99.510e-3947.37LysM peptidoglycan-binding domain-containing prote... [more]
R7QQZ04.430e-3849.34Uncharacterized protein n=2 Tax=Chondrus crispus T... [more]
A0A1B7UZ992.380e-3744.44Uncharacterized protein n=1 Tax=Anabaena sp. LE011... [more]
A0A1U9JM141.310e-3645.39Uncharacterized protein n=1 Tax=Aquaspirillum sp. ... [more]
LysM domain-containing protein n=1 Tax=Undibacterium umbellatum TaxID=2762300 RepID=UPI00164AF8C82.040e-3645.10LysM domain-containing protein n=1 Tax=Undibacteri... [more]
A0A218QX752.340e-3643.40Uncharacterized protein n=2 Tax=Nostocales TaxID=1... [more]
Q2W0C54.980e-3643.53Uncharacterized protein n=1 Tax=Magnetospirillum m... [more]
F2JYB15.420e-3645.39Peptidoglycan-binding lysin domain n=1 Tax=Marinom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..229
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000867_piloncontigtig00000867_pilon:751156..751921 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8092.t1Ggra8092.t1Gracilaria gracilis GNS1m malemRNAtig00000867_pilon 751156..751921 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8092.t1 ID=Ggra8092.t1|Name=Ggra8092.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=230bp
MRTPFFCSLFFALFAITEAQRYRGHWQKTWRVPSTAFRSANLGFAFSGYS
NVRTALSESRTVYKNLEGSKIITIGGGNYNGGWTRRTIRDVNRAIQKGYF
RNYRGIAYDIEQGDPGLTGMFLSSFKRAKRAGLFVIVTVSHTAPYGFTDA
TTIVNGLLRSRYIDIISPMMYKSGEGYRLPSYHLYGGRIITEGLDLFFEG
MAYQSKDTSRGARWSVENELFSVGFTSGS*
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