Ggra8066.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8066.t1
Unique NameGgra8066.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length616
Homology
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BLAST of Ggra8066.t1 vs. uniprot
Match: A0A2V3ILG5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ILG5_9FLOR)

HSP 1 Score: 116 bits (290), Expect = 1.970e-26
Identity = 69/150 (46.00%), Postives = 97/150 (64.67%), Query Frame = 0 
Query:  431 PESTLQELSLGPDGGAVADCVETAWLKQHGHATAILRERPSSTVLCM--PNMPCGTPGHLLRDCASERRTSCRLRTYAQICAERGDCRLDFLPVSRLRHSHDWSCIRSATSDGGVLEMTSVSVFPDSARLSASYVIAFAADVLGSLRLGF 578
            P +TL E +   + G    CVET+WL  +GH++ +L+   ++ VLC+   ++PCGT GHLLR C   R   CRLR YA++CAERG C    LPVSRLR S +WS + S + + G L +T +SV P ++RLS S++IAF A   G +R+GF
Sbjct:    8 PANTLIESNT--EDGDELPCVETSWLIANGHSSGVLQNYRATQVLCIRGASLPCGTAGHLLRAC--RRNGLCRLRCYAEVCAERGGCIKAVLPVSRLRLSVNWSAV-SYSDEQGSLALTPLSVRPFASRLSPSFLIAFLAH--GMIRMGF 150
The following BLAST results are available for this feature:
BLAST of Ggra8066.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3ILG51.970e-2646.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..346
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..128
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 129..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..170
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 591..615
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 147..151
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 562..590
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 171..561

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000867_piloncontigtig00000867_pilon:250212..253879 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8066.t1Ggra8066.t1Gracilaria gracilis GNS1m malemRNAtig00000867_pilon 250212..253879 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8066.t1 ID=Ggra8066.t1|Name=Ggra8066.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=616bp
MSTSPAPSQQRSVSPMLPYSLPTSPSPEALRGSSVYSALLQNQLDPLLRT
SPLRFPHCFQRCGAIVSYSDALVLVWATSARTLGTDPLCCKDHRDKSEDY
LLQADNMRLIVQQYFRSGQRSTNNRRIHLFSYELVRAYVLGFFFLVQNEI
QGTIFMILCMLFDCLMVFMLRTCDADHVIGNGVLISFTDQMLYVVDKHNQ
VIHQIPVKCVIGFGGFSYENQERKLLVYPELEEGSHHSSIFLHCFEVMTT
GKPILIGNCADCDGSRALLKEARQRLRALRDIGVLPEFECKLLHPRLYCD
HCLALSPSTIRVTRTNHTDEGGSMSCPTAPASHKPHKPHKPHSQSSGFDM
DFDSDWMESICMGSDAISDECTFILCPNLQLSDAELSNLEDPTEGMCRCI
CCDQLVPTCARQLPESDSVPVFDLACSCEMPESTLQELSLGPDGGAVADC
VETAWLKQHGHATAILRERPSSTVLCMPNMPCGTPGHLLRDCASERRTSC
RLRTYAQICAERGDCRLDFLPVSRLRHSHDWSCIRSATSDGGVLEMTSVS
VFPDSARLSASYVIAFAADVLGSLRLGFVCDFVLLVVLWAERVGERLLKL
LNAFFNARSSVLREL*
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