Ggra8059.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra8059.t1
Unique NameGgra8059.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length375
Homology
BLAST of Ggra8059.t1 vs. uniprot
Match: A0A2V3IGK2 (Collagen alpha-1(XXVIII) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGK2_9FLOR)

HSP 1 Score: 287 bits (734), Expect = 2.410e-91
Identity = 148/343 (43.15%), Postives = 213/343 (62.10%), Query Frame = 0
Query:   35 PPCDRTRCNIGHVCYVVDQSDSITAQEYAREQTFVRNFAKGAARKSHTPPKNSLVVFSAEAQLAQAPTAEFEEFDAAVQADRVFYESTAISAGLRLCQQQLRCAEGTKTIVLVSDGQTSPAEAELTRTAVGEIKDAGINVITAGIGCDANQDFLKEVATSPDMFIDLNVERPCGAALNAIKKICKPVSCPQVTVDPCTPINCQQAFDHCEFTFAGKNGLATFDVTGRADVSFTPMVISKNPEVHLGVLNMNDLIPEFIDESGVKKITEFGTQPFTPTNFKPYPIEGTRGSGIGHESYHANQKQLARNRCVRIFFSQVQVL--DPTDNLNTVP--ENYCVVFRT 373
            PP ++  C I +VCY++DQSDS+T  +Y +E+ FV   A+    KS + P NS V FS +A++ Q PT +  +F  AV   R F+E T  S  L  CQ+ L  AEG+K IVL++DG     E +       EIKD G  ++T G+G   ++ FL+ +A SPD+F+  + +      +  +  IC  +             +C +AFD CEFTF GK GL+TF + GR D SFTP ++SK+  V LGVLN N+++PEFI+++GV  IT FG+Q FTPT+FKPY +   +GSGIGH+++H NQKQ+A++RC+R++F+  Q +  +   N N VP  EN CVVFRT
Sbjct:   22 PPVEKP-CRIDNVCYLLDQSDSVTTSQYDKEKDFVIKIARQVELKSASDPFNSAVAFSTDAEVIQDPTRDLNKFVNAVNGPRQFFEGTKFSTALSECQELLEDAEGSKAIVLITDGGFFGNEGQNAEAIAAEIKDEGTFIVTVGVGSLIDEAFLRRIA-SPDLFVGTSFDNLDEVIMQVVSDICVDI----------IETDCSKAFDECEFTFRGKTGLSTFSIAGRPDRSFTPRIVSKDASVRLGVLNSNNIVPEFIEDNGVFPITNFGSQRFTPTHFKPYTLMNGQGSGIGHQTFHGNQKQVAKDRCIRVYFTHFQEIRNNKLINRNDVPRSENKCVVFRT 352          
BLAST of Ggra8059.t1 vs. uniprot
Match: A0A2V3IQI6 (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQI6_9FLOR)

HSP 1 Score: 253 bits (645), Expect = 7.450e-78
Identity = 148/375 (39.47%), Postives = 206/375 (54.93%), Query Frame = 0
Query:    6 FSFAVLAALFAAVFADQRPVNCASPRPSPPPCDRTRCNIGHVCYVVDQSDSITAQEYAREQTFVRNFAKGAARKSHTPPKNSLVVFSAEAQLAQAPTAEFEEFDAAVQADRVFYESTAISAGLRLCQQQLRCAEGTKTIVLVSDGQTSPAEAELTRTAVGEIKDAGINVITAGIGCDANQDFLKEVATSPDMFIDLNVERPCGAALNAIKKICKPVSCPQVTVDPCTPINCQQAFDHCEFTFAGKNGL--ATFDVTGRADVSFTPMVISKNPEVHLGVLNMNDLIPEFIDESGVKKITEFGTQPFTPTNFKPYPIEGTRGSGIGHESYHANQKQLARNRCVRIFFSQVQVLDPTD---NLNTVP--ENYCVVFRT 373
            F  A + A+ +AV   Q P    SP P+        C I HVCY++DQS SI   EYA EQ FV   A      S T P NS V FS   +  Q  T     F  AV  +R+F  +T IS GLR CQ+ L   +G++T+VL++DG+   ++   T  A  +I +AGI ++  GIG   N D L+++   P+ +ID   +            IC  +  P+ T        C++A+D C F F+G NG   A F + G  D SFTP V+ K     LG LN N+++PEFI+ +  + ITEFG+Q FTPT+FKPY I   RGSG+GH+++  NQ ++A ++CVR++F+  Q + P     N N VP  EN CVVFRT
Sbjct:    5 FFLATVLAVISAVALGQTP----SPSPA--------CQIKHVCYILDQSGSINDNEYALEQRFVNKIADIIDSTSITDPFNSAVAFSRSVRTIQPATNNLHTFKDAVSKERIFRSTTRISFGLRQCQRILEGKQGSRTMVLLTDGEPDSSDRLQTINAAEDITNAGIGIVAVGIGNSVNADLLRQLVPEPEFYIDTRFDDLDSKIQVVANAICNII--PEKT-------ECEKAYDKCLFKFSGVNGFNNAIFSIAGEPDKSFTPRVVPKATTYSLGTLNTNNVVPEFIEGNQGRPITEFGSQRFTPTHFKPYWISEERGSGVGHQTFQGNQLEVANDKCVRVYFTSFQEVPPNGQVVNRNNVPTSENKCVVFRT 358          
BLAST of Ggra8059.t1 vs. uniprot
Match: A0A2V3IGH1 (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGH1_9FLOR)

HSP 1 Score: 234 bits (597), Expect = 1.190e-70
Identity = 142/382 (37.17%), Postives = 202/382 (52.88%), Query Frame = 0
Query:    1 MYRRLFSFAVLAALFAAVFADQRPVNCASPRPSPPPCDRTRCNIGHVCYVVDQSDSITAQEYAREQTFVRNFAKGAARKSHTPPKNSLVVFSAEAQLAQAPTAEFEEFDAAVQADRVFYESTAISAGLRLCQQQLRCAEGTKTIVLVSDGQTSPAEAELTRTAVGEIKDAGINVITAGIGCDANQ--DFLKEVATSPDMFIDLNVERPCGAALNAIKKICKPVSCPQVTVDPCTPINCQQAFDHCEFTFAGKNGL--ATFDVTGRADVSFTPMVISKNPEVHLGVLNMNDLIPEFIDESGVKKITEFGTQPFTPTNFKPYPIEGTRGSGIGHESYHANQKQLARNRCVRIFFSQVQVLDPTD---NLNTVP--ENYCVVFRT 373
            M  R F   VLA +    F   +         SPP      C I HVCY++DQS SI   EY  EQ FV+  A+     S T P NS V FS   ++ Q PT   + F+ AV  +  F  +T IS GL  CQ+ L   +G++T+VL++DG     +   T  A  +IK+AGI ++  GIG    +  D L+++   P+ +ID   +            IC       +T+       C++A++ C F F+G +    A F + G  D S TP V+ K     LG LN N+++PEFI+E+ V  ITEFG+Q FTPT+FKPY I   RGSG+GH+++  NQ +LA ++CVR++F+  Q +       N N VP  E+ CVVFRT
Sbjct:    1 MTSRFFLVTVLAVISTVAFGRTQ---------SPP-----ACQIKHVCYILDQSGSINDNEYDLEQNFVKKIARIIESTSVTDPFNSAVAFSRNVRIIQLPTNNLKTFEDAVSEEERFRSTTRISLGLSECQRILEGKQGSRTMVLLTDGVPDSDDLSQTINAAEDIKNAGIGIVAVGIGISKGKGVDLLRQLVREPEFYIDTRFDDLDSKIQVVANAICN------ITL---VKTECEKAYNKCLFKFSGIDDFNNAIFSIAGEPDKSMTPQVVPKATTYSLGTLNTNNVVPEFIEENQVSLITEFGSQRFTPTHFKPYWISEERGSGVGHQTFQGNQLELANDKCVRLYFTSFQEISQNGQVVNRNNVPTSEHKCVVFRT 359          
BLAST of Ggra8059.t1 vs. uniprot
Match: A0A2V3J5W6 (Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5W6_9FLOR)

HSP 1 Score: 121 bits (303), Expect = 1.040e-26
Identity = 64/148 (43.24%), Postives = 88/148 (59.46%), Query Frame = 0
Query:  236 CQQAFDHCEFTFAGKNGLATFDVTGRADVSFTPMVISKNPEVHLGVLNMNDLIPEFIDESG-VKKITEFGTQP-FTPTNFKPYPIEGTRGSGIGHESYHANQKQLARNRCVRIFFSQVQVLDPTDNLNTVP-------ENYCVVFRTN 374
            C+QA+  C+F F     + TF + G  D  FTP ++S+ P V +GVLN N +IPEFI+  G V  IT     P F PT FKP  I    GSG+G++++  NQ   ARNRCVR+FF+  Q+L+PT   + +        +N CVVFRT+
Sbjct:  378 CEQAYQDCDFAFFDTPVVPTFTLGGNPDKPFTPRIVSRIPGVVVGVLNTNGIIPEFIESDGSVDLITSTPAIPMFAPTQFKPLSIPDDIGSGVGYQTFQGNQLVEARNRCVRLFFTSFQLLEPTPPFSVIANINADRTDNKCVVFRTD 525          
BLAST of Ggra8059.t1 vs. uniprot
Match: A0A2V3IP66 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP66_9FLOR)

HSP 1 Score: 120 bits (302), Expect = 2.230e-26
Identity = 66/163 (40.49%), Postives = 95/163 (58.28%), Query Frame = 0
Query:  220 PVSCPQVTVDPCTPINCQQAFDHCEFTFAGKNGLATFDVTGRADVSFTPMVISKNPEVHLGVLNMNDLIPEFIDESG-VKKITEF-GTQPFTPTNFKPYPIEGTRGSGIGHESYHANQKQLARNRCVRIFFSQVQVLDPTDNLNTV-------PENYCVVFRT 373
            P   P+  VD      CQQA+D C F F  +  +  F V G  +V+F+P++ S+N   +LGVLN N+L  E  +  G    IT    +Q F+ T FKP+ +  T+GSGIGHE++ A+Q+++ R RCVR+FFS  Q+L+ T   N V        +N CVVF+T
Sbjct:  444 PTPTPEPVVD-----KCQQAYDLCGFYFGNETDVPVFSVDGPDNVAFSPVIESRNDNENLGVLNSNNLEVEIFEGDGNYVGITSLPASQTFSRTQFKPFSLSNTKGSGIGHETFQADQREVIRGRCVRVFFSHFQLLELTPPFNVVGNVVAGREDNKCVVFKT 601          
BLAST of Ggra8059.t1 vs. uniprot
Match: uncharacterized protein LOC110234895 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BA983 (uncharacterized protein LOC110234895 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BA983)

HSP 1 Score: 60.5 bits (145), Expect = 3.840e-6
Identity = 45/152 (29.61%), Postives = 82/152 (53.95%), Query Frame = 0
Query:   47 VCYVVDQSDSITAQEYAREQTFVRNFAKGAARKSHTPPKNSLVVFSAEAQ--LAQAPTAEFEEFDAAVQADRVFYESTAISAGLRLCQQQLRCAEGT------KTIVLVSDG-QTSPAEAELTRTAVGEIKDAGINVITAGIGCDANQDFLK 189
            + ++VD S SI+ + Y + ++FV +FA+     S T  +++++++S +A+  +        ++F  AVQ       ST I   L++ +Q L   EGT      K  ++++DG QT   ++E    A   +K AG+ +IT GIG  AN++ L+
Sbjct: 3274 IAFLVDSSGSISPKNYVKIKSFVIDFARRFDISS-TGSRSAIILYSRDAEKYIDFNDKTNLDDFTKAVQGLPHQKGSTRIDRALQVAEQTLFGPEGTARRGFQKIAIILTDGKQTKTPDSESLDRASRPLKQAGVRIITVGIGKSANREELR 3424          
The following BLAST results are available for this feature:
BLAST of Ggra8059.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IGK22.410e-9143.15Collagen alpha-1(XXVIII) chain n=1 Tax=Gracilariop... [more]
A0A2V3IQI67.450e-7839.47VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IGH11.190e-7037.17VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3J5W61.040e-2643.24Cell surface glycoprotein 1 n=1 Tax=Gracilariopsis... [more]
A0A2V3IP662.230e-2640.49Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
uncharacterized protein LOC110234895 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109BA9833.840e-629.61uncharacterized protein LOC110234895 n=1 Tax=Exaip... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002035von Willebrand factor, type ASMARTSM00327VWA_4coord: 44..213
e-value: 4.4E-8
score: 42.9
IPR002035von Willebrand factor, type APFAMPF00092VWAcoord: 48..196
e-value: 2.1E-13
score: 50.9
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 46..221
score: 13.24665
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 46..218
e-value: 1.2E-20
score: 76.2
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 21..196
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..374
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availableCDDcd00198vWFAcoord: 46..198
e-value: 4.14284E-14
score: 67.591

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000867_piloncontigtig00000867_pilon:141137..142261 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra8059.t1Ggra8059.t1Gracilaria gracilis GNS1m malemRNAtig00000867_pilon 141137..142261 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra8059.t1 ID=Ggra8059.t1|Name=Ggra8059.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=375bp
MYRRLFSFAVLAALFAAVFADQRPVNCASPRPSPPPCDRTRCNIGHVCYV
VDQSDSITAQEYAREQTFVRNFAKGAARKSHTPPKNSLVVFSAEAQLAQA
PTAEFEEFDAAVQADRVFYESTAISAGLRLCQQQLRCAEGTKTIVLVSDG
QTSPAEAELTRTAVGEIKDAGINVITAGIGCDANQDFLKEVATSPDMFID
LNVERPCGAALNAIKKICKPVSCPQVTVDPCTPINCQQAFDHCEFTFAGK
NGLATFDVTGRADVSFTPMVISKNPEVHLGVLNMNDLIPEFIDESGVKKI
TEFGTQPFTPTNFKPYPIEGTRGSGIGHESYHANQKQLARNRCVRIFFSQ
VQVLDPTDNLNTVPENYCVVFRTN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002035VWF_A
IPR036465vWFA_dom_sf