Ggra7980.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7980.t1
Unique NameGgra7980.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length384
Homology
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BLAST of Ggra7980.t1 vs. uniprot
Match: A0A2V3IHD5 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHD5_9FLOR)

HSP 1 Score: 169 bits (429), Expect = 3.180e-45
Identity = 164/338 (48.52%), Postives = 193/338 (57.10%), Query Frame = 0 
Query:   85 HAQP---PWRTFSLDHQPLLAQTYLP-SHLYPQQAPAHASHQSSDAAXXXXXXXXXXXXXXXXXXXXXXSLRNPASTSHAQSTTFSPDSVLQDNQLAVAS-DYYSHG---GGASSAVPASSYWR--------------ACAEA------------SGACNVTSTVPNCMYDASLTPSH-HLLGSXXXXXXXXXXXXXXXXXXXXXATHPLPHLPTVQQTVSTAHTSLPDEQ---LLSAGSALAGTAVLADGATTTNTSSACT-YGDRAGVRWSKEEDDLLLKLSKDVGVVKGKTMKQVAERMAQMGYRRSHRACQTRRLRLESYTIESRRNQPLQLSE 383
            HA P    WR FSLDH+ +L Q+Y+P + +Y    P H           XXXXXXXXXXXXXXXXXXXX LRN  +TS      FSPDSVLQDNQLA+++ +YY+HG      +SA  A SYWR                AEA            + A ++   VP  +YD SL  +  HLL                        +H    +P     VS+A T  P       L+A +  A  A  A  A  + TSS+C+ +GDRAGVRWSKEEDDLLL LSKDVGVVKG+TMKQVAERMAQMGYRRSHRACQTRRLRLES T+ESRRN  LQLSE
Sbjct:   84 HAHPGADAWRPFSLDHERVLQQSYMPCTTMYAHSLPPHQP---------XXXXXXXXXXXXXXXXXXXXXLRNNCNTS------FSPDSVLQDNQLAMSTAEYYAHGVQTSAVTSAPLAHSYWRQPGEQAVVPNNAAATAAEAPSHSAPQLASNGNAAHHMACNVPCSVYDTSLDNAQSHLLAQADHAAAVLPQSTSGANHMLAMHSHHSASVPAANALVSSAATVAPTAAATPFLNADTLAAAGAHPA--ARASGTSSSCSAFGDRAGVRWSKEEDDLLLHLSKDVGVVKGRTMKQVAERMAQMGYRRSHRACQTRRLRLESLTLESRRN-ALQLSE 403
The following BLAST results are available for this feature:
BLAST of Ggra7980.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IHD53.180e-4548.52Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..83
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 316..367
score: 6.121142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:566409..567560 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7980.t1Ggra7980.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 566409..567560 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7980.t1 ID=Ggra7980.t1|Name=Ggra7980.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=384bp
MSASSPRAPPSLSQRAPPSASDALPADPSAAAIAPPPSTSPCALGVSTPT
TTVTSATNTATTAYNSTPTAENPPSPQFRYASSLHAQPPWRTFSLDHQPL
LAQTYLPSHLYPQQAPAHASHQSSDAASADAATAAAAAAAAAAAAAAAAS
LRNPASTSHAQSTTFSPDSVLQDNQLAVASDYYSHGGGASSAVPASSYWR
ACAEASGACNVTSTVPNCMYDASLTPSHHLLGSSSGAATSNVAAAAALSA
AAAAATHPLPHLPTVQQTVSTAHTSLPDEQLLSAGSALAGTAVLADGATT
TNTSSACTYGDRAGVRWSKEEDDLLLKLSKDVGVVKGKTMKQVAERMAQM
GYRRSHRACQTRRLRLESYTIESRRNQPLQLSE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb