Ggra7945.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7945.t1
Unique NameGgra7945.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length293
Homology
BLAST of Ggra7945.t1 vs. uniprot
Match: A0A2V3IFN2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IFN2_9FLOR)

HSP 1 Score: 165 bits (417), Expect = 2.060e-45
Identity = 117/291 (40.21%), Postives = 154/291 (52.92%), Query Frame = 0
Query:   20 SSQVQAIEPNTAPLFRTRKRSQKAXXXXXXXXXXXEVDEDE---RVSRTDLLLIKEAQAMREKTRVAALDTTMTGRKRHSSTQNPDMRNTSDNVTTIGLRNNFAVERSSNVMDEHMNKYIDEGIREKFGDQQGNDR-TDKSNKLTEENLYAIPEYLKVEDGRQYDPGEGMPAAGVEEIELSDHVRLKNEMETLQAREKLH-------------DAPSIGNRSESANPGYPKSGHR-SSTGYLRDVSTKSDGERHQQTSQTPRADNTDGKKRRFRHATDNLVADRFRKRWRR 292
            S + + +E   AP+FR RKR++KA             + D+    VS+TDLLLIK+ Q MREK+R +ALD T+ G KR SS+ N       +N   +GLRN                      IR+KFGD +  ++   KS++  EE LY IPE L+VED  QYDP +GMP AGVEE+EL + VRLKNEM+T+ A++KL              D        E   P  P +  +  ST  +     K + E H       R  + DGKKRRF+ ATD +VADRFRKRWRR
Sbjct:   35 SQKTKTLESAPAPVFRARKRARKARHRRPREEQSDHGESDDDGTEVSKTDLLLIKQVQMMREKSRTSALDITLAGSKR-SSSDNQQGSTKRNNNADVGLRNXXXXXXXXXXXXXXXXXXXXXXIRKKFGDHREQEKDASKSHEPEEEALYNIPENLRVEDRLQYDPAQGMPTAGVEEVELPEAVRLKNEMDTIVAQKKLEEQSAKRGLESTVCDPRMADENQEHVRPASPSTARKHGSTKRISQSFEKREAELHHMQ----RTSSKDGKKRRFQQATDKIVADRFRKRWRR 320          
BLAST of Ggra7945.t1 vs. uniprot
Match: R7Q4X6 (Protein C9orf78, putative n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4X6_CHOCR)

HSP 1 Score: 138 bits (347), Expect = 2.300e-35
Identity = 111/303 (36.63%), Postives = 165/303 (54.46%), Query Frame = 0
Query:   20 SSQVQAIEPNTAPLFRTRKRSQKAXXXXXXXXXXXEVDEDERVSRTD-------LLLIKEAQAMREKTRVAALDTTMTGRKRHSSTQNPDMRNTS--DNVTTIGLRNNFAVERSSNVMDEHMNKYIDEGIREKFGDQQGNDRTDK--SNKLTEENLYAIPEYLKVEDGRQYDPGEGMPAAGVEEIELSDHVRLKNEMETLQAREKLHD-------APSIGNRSESANPGYPK------------SGHRSSTGYLRDVSTKSDGERHQQTSQTPRADNTDGKKRRFRHATDNLVADRFRKRWRR 292
            SS++ A +  TA   R R +S K            EVD  + +S ++       LLL+++AQ MRE++R  ALD T  G KRH   +  +  N S  DNV +  L+++FAVERS + M+E M K+I++G+++KFGD+  +  T     N   E +L+A+PE LKVE   QYDPG+G+PAAGVEE+EL + VR +N  ET++A  KL +        P + +   + +  Y K             GH S    ++++S  S   + +    T        K+ R++ ATD LVADRF+KRWRR
Sbjct:    2 SSEIPADDKETAVRLRRRTKSTKKRAKRVLDD---EVDTPKNLSNSEKEMTAAELLLMRKAQQMREESRKIALDITG-GEKRHRDGEKTEKANPSSVDNVIS-DLKDDFAVERSGHDMEERMEKFINDGMKKKFGDKDDHTITSARDGNTADEFDLFAVPERLKVEQRPQYDPGDGLPAAGVEEVELPEDVRQRNIEETVRAHRKLLEKRDERLSTPILASIPGNVSANYSKHRSDWIAEHVGPKGHDSGNEPVQNISNVSGDGKGKVRDDTV-------KRPRYQAATDYLVADRFKKRWRR 292          
BLAST of Ggra7945.t1 vs. uniprot
Match: A0A7S0FZ82 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0FZ82_9RHOD)

HSP 1 Score: 75.9 bits (185), Expect = 8.910e-13
Identity = 41/110 (37.27%), Postives = 68/110 (61.82%), Query Frame = 0
Query:  108 DNVTTIGLRNNFAVERSSNVMDEHMNKYIDEGIREK-FGDQQGNDRTDKSNKLTEENLYAIPEYLKVEDGRQYDPGEGMPAAGVEEIELSDHVRLKNEMETLQAREKLHD 216
            +    +GL+ NFA ER    +++ + KYID+ +  K +   +G   T  +N   E++LY +PE L+VE    YDPGEG+PAAG+EE+++ D  R ++ ++T +A + L D
Sbjct:  100 EEALVVGLKTNFATEREDEDLEQQLEKYIDDQMVAKGYTVAKGGLVTAPAN--PEDDLYHVPEALRVEKRIAYDPGEGLPAAGLEEVDIDDEARKRSHIKTEEAVKDLPD 207          
BLAST of Ggra7945.t1 vs. uniprot
Match: A0A0K9RXL1 (Uncharacterized protein n=5 Tax=Chenopodiaceae TaxID=1804623 RepID=A0A0K9RXL1_SPIOL)

HSP 1 Score: 61.2 bits (147), Expect = 2.830e-7
Identity = 70/248 (28.23%), Postives = 111/248 (44.76%), Query Frame = 0
Query:   56 VDEDERVSRTDLLLIKEAQAMREKTRVAALDTTMTGRKRHSSTQNPDMRNTSDNVTTIGLRNNFAVERSSNVMDEHMNKYIDEGIREKFGDQ-QGNDRTDKSNKLTEENLYAIPEYLKVEDGRQYDPGEGMPAAGVEEIELSDHVRLKNEMETLQAREKLHDAPSIGN-RSESANP------------GYPKSGHRSSTGYLRDVSTKSDGERHQQTSQTPRADNTDGKKRRFRHATDNLVADRFRKR 289
            V +DE   R  L  +K  Q  RE+    A +TT   +  +  T+  +   T  +   + L++ FA E +  + D +M KYI++ + +K G      ++++    L EE LY IP++LKV+  R  +        G+ EI+L    +LKN  ET  A++ LH+   +G  + ES N              Y +   R      +D  T+  G         P  +  D   RR   ATD L+ +RFRKR
Sbjct:   18 VSDDEEERRLALEEVKLLQKQRERRSGIAANTTP--QSSNVVTKLGEKVETDGDKEELVLQDTFAQETAVMIEDPNMVKYIEQELAKKRGKNINATEQSENELTLAEEELYKIPDHLKVKK-RNSEESSTQWTTGIAEIQLPIEYKLKNIEETEAAKKFLHEKRYVGQTKKESTNSWSHNADYFQRGKDYAEKLRRDHPELYKDRGTEDSG-----VGSRPSDNGADPAGRRLA-ATDELMLERFRKR 256          
BLAST of Ggra7945.t1 vs. uniprot
Match: A0A059DDG2 (Uncharacterized protein n=3 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059DDG2_EUCGR)

HSP 1 Score: 59.3 bits (142), Expect = 1.730e-6
Identity = 55/189 (29.10%), Postives = 87/189 (46.03%), Query Frame = 0
Query:  115 LRNNFAVERSSNVMDEHMNKYIDEGIREKFGDQ-QGNDRTDKSNKLTEENLYAIPEYLKVEDGRQYDPGEGMPAAGVEEIELSDHVRLKNEMETLQAREKLHDAPSIGNRSESAN-------------PGYPKSGHRSSTGYLRDVSTKSDGERHQQTSQTPRADNTDGKKRRFRHATDNLVADRFRKR 289
            L++ FA E +  V D +M KY+++ + +K G     +D+ +   K  E+ LY IPE+LKV+  R  D G      G+ E++L    +LKN  ET  A++ L +   +G      N               Y +   R      +D S++ DG         P  DN D   +R + ATD  + +RFR+R
Sbjct:   98 LQDTFAQETAVMVEDPNMVKYVEQELAKKRGRNINKSDQVENDIKSAEDELYKIPEHLKVKK-RTSDEGSTQWTTGIAEVQLPIEYKLKNIEETEAAKKLLQEKRLMGRAKSDFNIPASYSADYFHRGRDYAEKLRRDHPELYKDRSSQDDG-----AGSKPADDNADAPGQR-QAATDEFMLERFRRR 279          
BLAST of Ggra7945.t1 vs. uniprot
Match: A0A8B8Q001 (protein COP1 SUPPRESSOR 2 n=1 Tax=Rhodamnia argentea TaxID=178133 RepID=A0A8B8Q001_9MYRT)

HSP 1 Score: 57.8 bits (138), Expect = 4.830e-6
Identity = 58/194 (29.90%), Postives = 88/194 (45.36%), Query Frame = 0
Query:  115 LRNNFAVERSSNVMDEHMNKYIDEGIREKFG------DQQGNDRTDKSNKLTEENLYAIPEYLKVEDGRQYDPGEGMPAAGVEEIELSDHVRLKNEMETLQAREKLHDAPSIGNRSESAN-------------PGYPKSGHRSSTGYLRDVSTKSDGERHQQTSQTPRADNTDGKKRRFRHATDNLVADRFRKR 289
            L++ FA E +  V D +M KY+++ + +K G      DQ  ND      K  E+ LY IPE+LKV+ GR  D G      G+ EI+L    +L+N  ET  A++ L +   +G      N               Y +   R      +D S++ DG         P  D+ D   +R + ATD  + +RFR+R
Sbjct:   92 LQDTFAQETAVMVEDPNMVKYVEQELAKKRGRNINKSDQLANDI-----KSAEDELYKIPEHLKVK-GRTSDEGSTQWTTGIAEIQLPIEYKLRNIEETEAAKKLLQEKRLMGRTKSDFNLPSSYSADYFHRGRDYAEKLRREHPELYKDRSSQDDG-----AGSKPADDSADAPGQR-QAATDEFMLERFRRR 273          
BLAST of Ggra7945.t1 vs. uniprot
Match: A0A2I4GGU5 (protein COP1 SUPPRESSOR 2 n=3 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4GGU5_JUGRE)

HSP 1 Score: 57.8 bits (138), Expect = 5.510e-6
Identity = 62/210 (29.52%), Postives = 95/210 (45.24%), Query Frame = 0
Query:   95 HSSTQNPDMRNTSD-NVTTIGLRNNFAVERSSNVMDEHMNKYIDEGIREKFGDQ-QGNDRTDKSNKLTEENLYAIPEYLKVEDGRQYDPGEGMPAAGVEEIELSDHVRLKNEMETLQAREKLHDAPSIGN-RSESANPG------------YPKSGHRSSTGYLRDVSTKSDGERHQQTSQTPRADNTDGKKRRFRHATDNLVADRFRKR 289
            H +T   D    +D     + L +NFA E +  V D +M KY+++ + +K G      D+ +   K  E+ LY IP++LKV+  R  +        G+ EI+L    +L+N  ET  A++ L +   +G  +SE   P             Y +   R      +D S   DG   +Q   T     TDG  +R + ATD  + DRFRKR
Sbjct:   94 HGATAKTDAGGATDAEKEDLVLHDNFAQETAVMVEDPNMVKYVEQELAKKRGRTIDSTDQAENDLKRAEDELYKIPDHLKVKR-RNSEESSTQWTTGIAEIQLPIEYKLRNIEETEAAKKLLQEKRLMGRTKSEFTIPASYSADYFQRGRDYAEKLRREHPELYKDRSLPDDGAGPKQNETT-----TDGAVQR-QAATDEFMLDRFRKR 296          
BLAST of Ggra7945.t1 vs. uniprot
Match: W1P5I2 (Uncharacterized protein n=1 Tax=Amborella trichopoda TaxID=13333 RepID=W1P5I2_AMBTC)

HSP 1 Score: 57.0 bits (136), Expect = 7.810e-6
Identity = 53/184 (28.80%), Postives = 86/184 (46.74%), Query Frame = 0
Query:  115 LRNNFAVERSSNVMDEHMNKYIDEGIREKFGDQ-QGNDRTDKSNKLTEENLYAIPEYLKVEDGRQYDPGEGMPAAGVEEIELSDHVRLKNEMETLQAREKLHDAPSIGN-RSESANPG-YPKSGHRSSTGYLRDVST------KSDGERHQQTSQTPRADNTDGKKRRFRHATDNLVADRFRKR 289
            L++ FA E +  V D +M KY+++ + +K G   +  ++T+  NK  E+ LY IPE+LKV+  R  +        G+ E++L    +L+N  ET  A++ L D   +G  R E + P  Y     +    Y   +        K    R       P   +  G+  R + ATD  + +RFRKR
Sbjct:   74 LQDTFAQETAVTVEDPNMLKYVEQELAKKRGKNIETTNQTENENKRAEDELYMIPEHLKVKR-RNSEESSTQWTTGIAEVQLPIEYKLRNIEETEAAKKLLQDKRFVGRARPEVSIPSSYSADYFQRGRDYAEKLRQEHPELYKDKSARDSNNGSKPTEGSLLGEGGRRQAATDEFMLERFRKR 256          
BLAST of Ggra7945.t1 vs. uniprot
Match: A0A2C9UM93 (Uncharacterized protein n=4 Tax=Crotonoideae TaxID=235631 RepID=A0A2C9UM93_MANES)

HSP 1 Score: 57.0 bits (136), Expect = 8.220e-6
Identity = 54/189 (28.57%), Postives = 89/189 (47.09%), Query Frame = 0
Query:  115 LRNNFAVERSSNVMDEHMNKYIDEGIREKFGDQ-QGNDRTDKSNKLTEENLYAIPEYLKVEDGRQYDPGEGMPAAGVEEIELSDHVRLKNEMETLQAREKLHDAPSIGN-RSESANPG------------YPKSGHRSSTGYLRDVSTKSDGERHQQTSQTPRADNTDGKKRRFRHATDNLVADRFRKR 289
            L++ FA E +  V D +M KY+++ + +K G      ++ +   K  E+ LY IPE+LKV+  R  +        G+ E++L    +L+N  ET  A++ L +   +G  +SE + P             Y +   R      +D S++ DG         P  +NTD  +R    ATD  + +RFRKR
Sbjct:   83 LQDTFAQETAVMVEDPNMLKYVEQELAKKRGKNIDATNQVENDLKRAEDELYKIPEHLKVKR-RNSEESSTQWTTGIAEVQLPIEYKLRNIEETEAAKKLLQEKRLMGQAKSEFSIPSSYSADYFQRGRDYAEKLRREHPELYKDRSSQDDG-----AGSKPAENNTDATRREA--ATDEFMLERFRKR 263          
The following BLAST results are available for this feature:
BLAST of Ggra7945.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2V3IFN22.060e-4540.21Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q4X62.300e-3536.63Protein C9orf78, putative n=1 Tax=Chondrus crispus... [more]
A0A7S0FZ828.910e-1337.27Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
A0A0K9RXL12.830e-728.23Uncharacterized protein n=5 Tax=Chenopodiaceae Tax... [more]
A0A059DDG21.730e-629.10Uncharacterized protein n=3 Tax=Eucalyptus grandis... [more]
A0A8B8Q0014.830e-629.90protein COP1 SUPPRESSOR 2 n=1 Tax=Rhodamnia argent... [more]
A0A2I4GGU55.510e-629.52protein COP1 SUPPRESSOR 2 n=3 Tax=Juglandaceae Tax... [more]
W1P5I27.810e-628.80Uncharacterized protein n=1 Tax=Amborella trichopo... [more]
A0A2C9UM938.220e-628.57Uncharacterized protein n=4 Tax=Crotonoideae TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010756Telomere length and silencing protein 1PFAMPF07052Hep_59coord: 118..214
e-value: 1.5E-11
score: 44.8
IPR010756Telomere length and silencing protein 1PANTHERPTHR13486TELOMERE LENGTH AND SILENCING PROTEIN 1 TLS1 FAMILY MEMBERcoord: 37..292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..18
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..286
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..65
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 201..292
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:494707..495585 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7945.t1Ggra7945.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 494707..495585 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7945.t1 ID=Ggra7945.t1|Name=Ggra7945.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=293bp
MGSPEPSLEHREKDKPQKTSSQVQAIEPNTAPLFRTRKRSQKARKKSSKD
RKEHEVDEDERVSRTDLLLIKEAQAMREKTRVAALDTTMTGRKRHSSTQN
PDMRNTSDNVTTIGLRNNFAVERSSNVMDEHMNKYIDEGIREKFGDQQGN
DRTDKSNKLTEENLYAIPEYLKVEDGRQYDPGEGMPAAGVEEIELSDHVR
LKNEMETLQAREKLHDAPSIGNRSESANPGYPKSGHRSSTGYLRDVSTKS
DGERHQQTSQTPRADNTDGKKRRFRHATDNLVADRFRKRWRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010756Tls1