Ggra7927.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7927.t1
Unique NameGgra7927.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length336
Homology
BLAST of Ggra7927.t1 vs. uniprot
Match: A0A2V3IX98 (Non-structural maintenance of chromosomes element 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX98_9FLOR)

HSP 1 Score: 474 bits (1219), Expect = 8.000e-166
Identity = 237/330 (71.82%), Postives = 277/330 (83.94%), Query Frame = 0
Query:    1 MSQVNRDAVENRRKATIVLKQLREHQQQVDADKDEATDLRSETLKQHFVKAAKNLEKAKTADQALVDAQIFHKLGVYSKRQAEQLQTGLRVYDVATFTDNLIAKLRSANADKYDEEDEQSQHISVNFLDIGRSVFNRWKTFHFPDVHFGNEPKDEIKKVRERKKAERIKKGGPATKPNQLRPTDLEETETDKQVAEMKRELQRRKRCNFWLFVIDPNSFPRSVENIFHSSFLVKEKFASLDLKSEGEPMIRYINPIDEEMDGGDQERKGSEEEIGNSQFIMGFDRNLWQEMIRKHNIRKCLFPPKTRDYEDARLQQLEAYGQNGDNTDEM 330
            M Q N +A+ENR++ATI+LKQLREHQQ+V+ADK+EATD+RSE L QHF +AA+NL+K KTADQALVDAQIFHKLG+YSKRQAEQLQ+GLR YD+ TFTDNLIAKLR ANA+KYD+E+ Q Q +SVNFLDIGRSVF+RWK     DV +GN P+DE+KK R R+K ER+K GGPAT+P++LRPTDLEETETDKQVAEMKRELQRR+RCNFWLFVIDPNSFPRSVEN+FHSSFLVKEKFASLDLKS  +P IRY++P   E     QE   ++ +I NSQFIMGFDRN+WQEMIRKHNIRKCLFPPK R  EDA L++L  Y Q+      M
Sbjct:    1 MGQGNPEALENRKQATIILKQLREHQQEVEADKEEATDVRSEALTQHFERAAQNLKKTKTADQALVDAQIFHKLGIYSKRQAEQLQSGLRTYDIKTFTDNLIAKLRRANAEKYDDEEGQLQQVSVNFLDIGRSVFSRWKIKPSQDVMYGNAPRDEVKKARVRRKPERVKGGGPATRPSELRPTDLEETETDKQVAEMKRELQRRRRCNFWLFVIDPNSFPRSVENVFHSSFLVKEKFASLDLKSTNDPSIRYVDPNSAETTDTTQEGDANDNDITNSQFIMGFDRNVWQEMIRKHNIRKCLFPPKQRTGEDAELRRLRQYEQSAQGASAM 330          
BLAST of Ggra7927.t1 vs. uniprot
Match: non-structural maintenance of chromosomes element 4 homolog A-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDB35 (non-structural maintenance of chromosomes element 4 homolog A-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDB35)

HSP 1 Score: 221 bits (562), Expect = 3.000e-66
Identity = 131/301 (43.52%), Postives = 193/301 (64.12%), Query Frame = 0
Query:   12 RRKATIVLKQLREHQQQVDADKDEATDLRSETLKQHFVKAAKNLEKAKTADQALVDAQIFHKLGVYSKRQAEQLQTGLRVYDVATFTDNL---IAKLRSANADKYDEEDE---QSQHISVNFLDIGRSVFNRWKTFHFPDVHF--GNEPKDEIKKVRERKKAERIKKGGPATKPNQL-RPTDLEETETDKQVAEMKRELQRRKRCNFWLFVIDPNSFPRSVENIFHSSFLVKEKFASLDLKSEGEPMIRYINPIDEEMDGGDQERKGSEEEIGNSQFIMGFDRNLWQEMIRKHNIRKCLFP 303
            +++A  V+K+LREH + +D +KDE  + RS  L  HFV+A +N+ KAKT DQAL+DAQIF KL  +S+RQA QLQ+GL+ YD  +F D L   + + R+ + D  D++D    +++H  ++   +GR+++NR++TF  P +HF  GN  + + + V+ +K   R+KKG  A KP ++      E  E D+Q+ EMK  LQ+    NFW FV+DP SF RS+ENIFHSSFLVKE  A L+L +E  PMI + N + ++ + G      + E   NSQ+IM FD NLW+ +I K+NI  C+ P
Sbjct:   22 KQRAKKVIKELREHIETLDENKDEVLNPRSSALASHFVRAEENVRKAKTVDQALIDAQIFAKLSDFSRRQAAQLQSGLKQYDARSFVDRLAQIMQQSRNGDEDGGDDDDALDTENKHPELDLHTLGRNIWNRYRTF--PSMHFMYGNS-EVQPRAVKAKKSGNRVKKGAAAVKPKEMTEEAGAEVGEADQQIKEMKELLQKHGEHNFWTFVVDPASFTRSIENIFHSSFLVKEGHAKLNLSAEP-PMITF-NLVRKDGESGSSAEAQAREFEENSQYIMRFDFNLWRNVIEKYNISHCMLP 317          
BLAST of Ggra7927.t1 vs. uniprot
Match: A0A1X6NRQ7 (Non-structural maintenance of chromosomes element 4 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NRQ7_PORUM)

HSP 1 Score: 111 bits (277), Expect = 7.100e-25
Identity = 82/251 (32.67%), Postives = 133/251 (52.99%), Query Frame = 0
Query:   60 TADQALVDAQIFHKLGVYSKRQAEQLQTGLRVYDVATFTDNLIAKLRSANADKYDEEDEQSQHISVNFLDIGRSVFNRWKTFHFPDVHFGN---EPKDEIKKVRERKKAERIKKGGPATKPNQLRPTD-LEETETDKQVAEMKRELQRRKRCN--FWLFVIDPNSFPRSVENIFHSSFLVKEKFASLDLKSEGEPMIRYINPIDEEMD-GGDQERKGSEEEIGNSQFIMGFDRNLWQEMIRKHNIRKCLFP 303
            TA Q L+  + F +L   +KRQA ++QTGL+ +D ATF + + +++    A+  D E   +   +++F  +G+S +  +      D  FG    +P+  I++           +G  A +P  +   D L++TETD Q+  M+REL RR      F+ F++DP SF RSVENIFHSSFL+K+  A L ++     ++     + E  D GGD E       + N+Q I+ FD + W+E+   + I   +FP
Sbjct:   37 TASQGLMGYRAFAQLTHCAKRQATKVQTGLKDFDTATFVNKIRSQMTGGAAEAGDGE---APTATLDFASLGKSTWRNYARAPAVDFMFGLADIQPRAPIQRKAPTGPRAGSLRGAAAARPENVVDKDKLDKTETDLQIETMRRELSRRGADGTPFYSFLVDPVSFSRSVENIFHSSFLIKDGRARLVMRGNVPTLV--AKGVSERSDPGGDAETP-----MENAQTILRFDYDKWEEVKATYRINASVFP 277          
BLAST of Ggra7927.t1 vs. uniprot
Match: A0A8D2N4L6 (Non-structural maintenance of chromosomes element 4 n=3 Tax=Zonotrichia albicollis TaxID=44394 RepID=A0A8D2N4L6_ZONAL)

HSP 1 Score: 105 bits (261), Expect = 4.800e-22
Identity = 86/329 (26.14%), Postives = 152/329 (46.20%), Query Frame = 0
Query:    1 MSQVNRDAVENRRKATIVLKQLREHQQQVDADKDEATDLRSETLKQHFVKAAKNLEKAKTADQALVDAQIFHKLGVYSKRQAEQLQTGLRVYDVATFTDNLIAKLRSANADKYDEEDEQSQHISVNFL---------DIGRSVFNRWKTFHFPDVHFGNEPKDEIKKVRERKKAERIKKGGPATKPNQLRPTDLEETE-TDKQVAEMKRELQRR------KRCNFWLFVIDPNSFPRSVENIFHSSFLVKEKFASLDLKSEGEPMIRYINPIDEEMDGGDQERKGSEEE--IGNSQFIMGFDRNLWQEMIRKHNIRKCLFPPKTRDYED 311
            + Q+N D  ++R    ++  Q RE    V  +++     +S  L +   +A +  ++ + A +A +DAQ         K +A +L + +  +D   F ++L+  +     +   EED+ S+ +   FL         +       R  TFH+    F +EP    +++  +KKA R K       P QL+  +    E T+K+V  + R LQ           +F+ FV+DPNSF R+VEN+FH SFLV++  A + L  +  P+I  + P           R+G EE      +Q ++  D++ W+E+I    I + + PP  +  E+
Sbjct:   39 LRQLNIDEGDDREHNRMIRNQYRELISAVQQNRESILSSKSNRLTEALEEANRIFDEVRQAREAALDAQFLVIASNIGKEKANELHSEMSAFDSTAFAEDLLTFMGINRTEV--EEDDDSEDVPGGFLPSHAWQKMGEEASKYLKRAPTFHYMMGSFKSEPPVRKQRIERQKKASRGK--AERAMPAQLKEMEQSHLEATEKEVERILRILQTHFENDPNTSISFFDFVVDPNSFARTVENMFHVSFLVRDGLAEIKLDEDELPIIEPVKP-----------REGEEESRAAARNQVVISLDQSQWKEIIETFQITEAMIPPLYQTEEE 352          
BLAST of Ggra7927.t1 vs. uniprot
Match: U3JHH8 (Non-structural maintenance of chromosomes element 4 n=2 Tax=Ficedula albicollis TaxID=59894 RepID=U3JHH8_FICAL)

HSP 1 Score: 100 bits (249), Expect = 2.450e-20
Identity = 86/327 (26.30%), Postives = 152/327 (46.48%), Query Frame = 0
Query:    1 MSQVNRDAVENRRKATIVLKQLREHQQQVDADKDEATDLRSETLKQHFVKAAKNLEKAKTADQALVDAQIFHKLGVYSKRQAEQLQTGLRVYDVATFTDNLIAKLRSANADKYDEEDEQSQHISVNFL---------DIGRSVFNRWKTFHFPDVHFGNEPKDEIKKVRERKKAERIKKGGPATKPNQLRPTDLEETE-TDKQVAEMKRELQRRKR------CNFWLFVIDPNSFPRSVENIFHSSFLVKEKFASLDLKSEGEPMIRYINPIDEEMDGGDQERKGSEEEIGNSQFIMGFDRNLWQEMIRKHNIRKCLFPPKTRDYED 311
            + Q+N    ++R    ++  Q RE    V  +++   + +S  L +   +A +  +  + A +A +DAQ         K +A +L + +  +D   F ++L+  +   N  + +E D+ S+  S  FL         +     F R  TFHF    F +EP    +++  +KKA R K       P QL+  +    E T+K+V  +   LQ           +F+ FVIDPNSF R+VEN+FH SFL+++  A + +  +  P+I  + P   E D     R G+  ++     ++  D+  WQE+I    IR+ +  P ++  E+
Sbjct:   45 LRQLNIGEGDDREHNRMIRSQYRELISTVQQNREAMLNSKSNRLTEALEEANRLFDGVRRAREAALDAQFLVIASNIGKEKANELHSEMSAFDSTAFAEDLLTFM-GVNRTEVEETDD-SEDASAVFLPSDAWKTMGEEATKYFRRAHTFHFLSGSFNSEPPVPKQRIERQKKASRGK--AERAMPAQLKKMEESHQEATEKEVERILGILQTHFENDPNTPISFFDFVIDPNSFARTVENMFHVSFLIRDGLAKIKMDEDELPVIEPLKPSGAEEDS----RAGARNQV-----VLSLDQKEWQEIIETFQIREAMITPLSQSTEE 358          
BLAST of Ggra7927.t1 vs. uniprot
Match: non-structural maintenance of chromosomes element 4 homolog A isoform X1 n=4 Tax=Bufo TaxID=8383 RepID=UPI001CF2A656 (non-structural maintenance of chromosomes element 4 homolog A isoform X1 n=4 Tax=Bufo TaxID=8383 RepID=UPI001CF2A656)

HSP 1 Score: 98.2 bits (243), Expect = 1.020e-19
Identity = 81/300 (27.00%), Postives = 141/300 (47.00%), Query Frame = 0
Query:   21 QLREHQQQVDADKDEATDLRSETLKQHFVKAAKNLEKAKTADQALVDAQIFHKLGVYSKRQAEQLQTGLRVYDVATFTDNLIAKLRSANADKYDEEDEQSQHISVNFLDI---------GRSVFNRWKTFHFPDVHFGNEPKDEIKKVRERKKAERIKKGGPATKPNQLRPTDLEETE-TDKQVAEMKRELQRRKR------CNFWLFVIDPNSFPRSVENIFHSSFLVKEKFASLDLKSEGEPMIRYINPIDEEMDGGDQERKGSEEEIGNSQFIMGFDRNLWQEMIRKHNIRKCLFPP 304
            Q RE  Q +  ++D+    RS  L      A +   +     +A +DAQ+        K +A QLQ  + V+D  +F ++L++ +   N  +  + D + +  +  +L +             F R  TFHF    F  EP    +K+  +K+A ++++   +  P+QL+  +    E T+K+V  +   LQ   R       +F+ FVIDPNSF R+VENIFH SF++++ FA ++L S+  P+I  I          D E +  +E     Q ++      W+E++    I + + PP
Sbjct:   38 QYRELMQSMYQNRDDMLSSRSNKLTDTLHAANQLFAEVSKPREAALDAQLLVLATNLGKEKANQLQADMTVFDPTSFAEDLLSFM-GINRLENPDSDSEDEGCAKGYLGVDAWQKLGTEANKFFKRTPTFHFMLGSFKTEPPVARQKIERQKRASKVQE--KSVMPSQLKKMEESHQEATEKEVERILGFLQTYFREDPDNPISFFDFVIDPNSFARTVENIFHVSFIIRDGFARINLDSDKLPVIEPI--------AQDSESQVDKENQPRYQGVISLSHQDWKEIVETFEIEQPMIPP 326          
BLAST of Ggra7927.t1 vs. uniprot
Match: A0A822H9Q3 (Non-structural maintenance of chromosomes element 4 n=1 Tax=Ranitomeya imitator TaxID=111125 RepID=A0A822H9Q3_9NEOB)

HSP 1 Score: 96.7 bits (239), Expect = 3.560e-19
Identity = 83/300 (27.67%), Postives = 141/300 (47.00%), Query Frame = 0
Query:   21 QLREHQQQVDADKDEATDLRSETLKQHFVKAAKNLEKAKTADQALVDAQIFHKLGVYSKRQAEQLQTGLRVYDVATFTDNLIA-----KLRSANADKYDEEDEQSQHISVNFLDIGRSV---FNRWKTFHFPDVHFGNEPKDEIKKVRERKKAERIKKGGPATKPNQLRPTDLEETE-TDKQVAEMKRELQRRKR------CNFWLFVIDPNSFPRSVENIFHSSFLVKEKFASLDLKSEGEPMIRYINPIDE-EMDGGDQERKGSEEEIGNSQFIMGFDRNLWQEMIRKHNIRKCLFPP 304
            Q RE  Q +   +++    RS  L      A +   +     +A +DAQ         K +A QLQ  + V+D  +F ++L++     +L +A++D  DE+  +       +  +G      F R  TFHF    F  EP    +K+  +K+A ++ + G    P QL+  +    E T+K+V  +   LQ   R       +F+ FVIDPNSF R++ENIFH SF++++ FA + L  +  P+I  I+   E ++D  +Q R          Q ++      W E+++   I + + PP
Sbjct:   36 QYRELMQSMQQHREDMLSSRSNKLTDTLQAANQLFAEVSKPREAALDAQFLVLATNLGKEKANQLQADMTVFDPTSFAEDLLSFMGINRLENADSDSEDEDGAKGYLSKDAWQKLGTEADKYFKRTPTFHFMLGSFKTEPPVMRQKIERQKRASKVAEKG--VMPAQLKKMEESHQEATEKEVERILGFLQTYFREDPDTPISFFDFVIDPNSFARTIENIFHVSFIIRDGFARIKLDQDKLPIIEPISQESESQVDKDNQPRY---------QGVISLSHQDWTEIVKTFEITEPMIPP 324          
BLAST of Ggra7927.t1 vs. uniprot
Match: A0A5C3R258 (Non-structural maintenance of chromosomes element 4 n=1 Tax=Pterula gracilis TaxID=1884261 RepID=A0A5C3R258_9AGAR)

HSP 1 Score: 95.1 bits (235), Expect = 1.100e-18
Identity = 80/288 (27.78%), Postives = 140/288 (48.61%), Query Frame = 0
Query:   37 TDLRSETLKQHFV-------KAAKNL--EKAKTADQALVDAQIFHKLGVYSKRQAEQLQTGLRVYDVATFTDNLIAKL---RSANADKYDEED-EQSQHISVNFLDIGRSVFNRWKTFHFPDVHFGNEPKD-EIKKVRERKKAERIKKGGPATKPNQLRPTDL--EETETDKQVAEMKRELQRR--KRCNFWLFVIDPNSFPRSVENIFHSSFLVKEKFASLDLKSEGEPMIRYINPIDEEMDGGDQERKGSEEEIGNSQFIMGFDRNLWQEMIRKHNIRKCLFPPKT 306
            TD+ +   K+H +       KA  NL  +  K   +A +D+ +       S  +A  +++    +DV  F   LI  +   +S +++  DE D  +   + +++  +GR      K+   P + F   P   E+KK    K+A + K  G A+KP ++R  D+   E ET   V  +++ L+    +R N + FV++PN+F +SVENIF+ SFL+++   +L+L   GEP +    P  +E    D+ R      +   Q +M FD   WQ  I   +IR+ + P ++
Sbjct:   26 TDIENANSKEHSIADLSTTIKAVDNLFVKLVKGPQEATLDSAVLLHASAISSEKARSMKSSSGAFDVDDFISRLINFMGGNKSMDSELPDESDASEDGGMPLDWERLGRKALA--KSRRVPTMDFMLGPLSIEVKKRAITKRARQEKNTGEASKPQEIREEDIARSENETSNNVRSLEKILEEMDDERVNLFRFVVNPNNFAQSVENIFYLSFLIRDGKVALELSDSGEPELFLCEPPTDE----DRMRNN----LRKRQIVMEFDMATWQRSIEVFDIRQPMIPERS 303          
BLAST of Ggra7927.t1 vs. uniprot
Match: non-structural maintenance of chromosomes element 4 homolog A-like n=1 Tax=Apaloderma vittatum TaxID=57397 RepID=UPI0005212A6D (non-structural maintenance of chromosomes element 4 homolog A-like n=1 Tax=Apaloderma vittatum TaxID=57397 RepID=UPI0005212A6D)

HSP 1 Score: 95.1 bits (235), Expect = 1.330e-18
Identity = 80/293 (27.30%), Postives = 133/293 (45.39%), Query Frame = 0
Query:   40 RSETLKQHFVKAAKNLEKAKTADQALVDAQIFHKLGVYSKRQAEQLQTGLRVYDVATFTDNLIAKLRSANADKYDEEDEQSQHISVNFL---------DIGRSVFNRWKTFHFPDVHFGNEPKDEIKKVRERKKAERIKKGGPATK--PNQLRPTDLEETE-TDKQVAEMKRELQRRKR------CNFWLFVIDPNSFPRSVENIFHSSFLVKEKFASLDLKSEGEPMIRYINPIDEEMDGGDQERKGSEEEIGNSQFIMGFDRNLWQEMIRKHNIRKCLFPPKTRDYEDARL 314
            +S  L +   +A K       A +A +DAQ         K +A +L++ +  +D   F D+L+  +   N  + +++D  S+ +S  +L         +     F R  TFH+    F ++P    +++  +KKA    +GG   +  P QL+  +    E T+K+V  +   LQ           +F+ FVIDPNSF R+VENIFH SFL+++ FA L L     P+I        E    D+ RK        +Q ++      W+EMI  + I + +  P   + ED  +
Sbjct:   48 KSNRLTEALEEANKLFSGVSCAREAALDAQFLVLASNLGKEKANELRSEMTTFDSLAFADDLLTFM-GINRIEIEDKDSDSEGVSSGYLPSNAWHKLGEEAEKYFRRAPTFHYMLGSFKSDPPVTRQRIERQKKA----RGGEEKRAMPAQLKKMEESPQEATEKEVERILALLQTHSTNDPETPISFFEFVIDPNSFARTVENIFHVSFLIRDGFARLKLDENELPVI--------EPSKDDERRKDDRGAGARNQLVLSLSHQEWKEMIDAYGITEPMISPPHGNEEDMEI 327          
BLAST of Ggra7927.t1 vs. uniprot
Match: non-structural maintenance of chromosomes element 4 homolog A n=1 Tax=Rana temporaria TaxID=8407 RepID=UPI001AAD1B00 (non-structural maintenance of chromosomes element 4 homolog A n=1 Tax=Rana temporaria TaxID=8407 RepID=UPI001AAD1B00)

HSP 1 Score: 94.0 bits (232), Expect = 3.300e-18
Identity = 76/263 (28.90%), Postives = 128/263 (48.67%), Query Frame = 0
Query:   56 EKAKTADQALVDAQIFHKLGVYSKRQAEQLQTGLRVYDVATFTDNLIA-----KLRSANADKYDEEDEQSQHISVNFLDIGRSV---FNRWKTFHFPDVHFGNEPKDEIKKVRERKKAERIKKGGPATKPNQLRPTDLEETE-TDKQVAEMKRELQRRKR------CNFWLFVIDPNSFPRSVENIFHSSFLVKEKFASLDLKSEGEPMIRYINPIDEEMDGGDQERKGSEEEIGNSQFIMGFDRNLWQEMIRKHNIRKCLFP 303
            E    A +A +DAQ+        K +A QL+T L V+D ++F ++L+      +L + ++D  DE   +       +  +G      F R  TFHF    F  EP    +++  +++AER+++      P+QL+  D    E T+K+V  +   LQ   R       +F+ FVI+P SF R+VENIFH SF++++ FA + L ++  P+I  +N  DE     D  R+         Q ++      W+E+I    I + + P
Sbjct:   71 EGVSKAREAALDAQLLVLASNLGKEKASQLRTDLTVFDPSSFAEDLLTFMGINRLENPDSDSEDETFAKGYLPPDAWYKLGTGAAKYFKRTPTFHFMLGSFKTEPAVVRQRIERQRRAERVEE--KRVMPSQLKKMDESHQEATEKEVERILGYLQSYFRDDPDTPISFFDFVINPRSFSRTVENIFHVSFIIRDGFARIILDNDKLPVIEPVNQEDESQVDKDNLRR--------YQGVISLSHQDWKEIIETFEITEPMIP 323          
The following BLAST results are available for this feature:
BLAST of Ggra7927.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IX988.000e-16671.82Non-structural maintenance of chromosomes element ... [more]
non-structural maintenance of chromosomes element 4 homolog A-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDB353.000e-6643.52non-structural maintenance of chromosomes element ... [more]
A0A1X6NRQ77.100e-2532.67Non-structural maintenance of chromosomes element ... [more]
A0A8D2N4L64.800e-2226.14Non-structural maintenance of chromosomes element ... [more]
U3JHH82.450e-2026.30Non-structural maintenance of chromosomes element ... [more]
non-structural maintenance of chromosomes element 4 homolog A isoform X1 n=4 Tax=Bufo TaxID=8383 RepID=UPI001CF2A6561.020e-1927.00non-structural maintenance of chromosomes element ... [more]
A0A822H9Q33.560e-1927.67Non-structural maintenance of chromosomes element ... [more]
A0A5C3R2581.100e-1827.78Non-structural maintenance of chromosomes element ... [more]
non-structural maintenance of chromosomes element 4 homolog A-like n=1 Tax=Apaloderma vittatum TaxID=57397 RepID=UPI0005212A6D1.330e-1827.30non-structural maintenance of chromosomes element ... [more]
non-structural maintenance of chromosomes element 4 homolog A n=1 Tax=Rana temporaria TaxID=8407 RepID=UPI001AAD1B003.300e-1828.90non-structural maintenance of chromosomes element ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 22..42
NoneNo IPR availableCOILSCoilCoilcoord: 185..205
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..189
IPR014854Non-structural maintenance of chromosome element 4, C-terminalPFAMPF08743Nse4_Ccoord: 208..300
e-value: 4.7E-21
score: 74.9
IPR027786Nse4/EID familyPANTHERPTHR16140UNCHARACTERIZEDcoord: 17..315

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:449088..450095 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7927.t1Ggra7927.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 449088..450095 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7927.t1 ID=Ggra7927.t1|Name=Ggra7927.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=336bp
MSQVNRDAVENRRKATIVLKQLREHQQQVDADKDEATDLRSETLKQHFVK
AAKNLEKAKTADQALVDAQIFHKLGVYSKRQAEQLQTGLRVYDVATFTDN
LIAKLRSANADKYDEEDEQSQHISVNFLDIGRSVFNRWKTFHFPDVHFGN
EPKDEIKKVRERKKAERIKKGGPATKPNQLRPTDLEETETDKQVAEMKRE
LQRRKRCNFWLFVIDPNSFPRSVENIFHSSFLVKEKFASLDLKSEGEPMI
RYINPIDEEMDGGDQERKGSEEEIGNSQFIMGFDRNLWQEMIRKHNIRKC
LFPPKTRDYEDARLQQLEAYGQNGDNTDEMGSAAF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014854Nse4_C
IPR027786Nse4/EID