Ggra7926.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7926.t1
Unique NameGgra7926.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length295
Homology
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BLAST of Ggra7926.t1 vs. uniprot
Match: A0A2V3IVZ7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVZ7_9FLOR)

HSP 1 Score: 397 bits (1020), Expect = 7.930e-137
Identity = 198/294 (67.35%), Postives = 229/294 (77.89%), Query Frame = 0 
Query:    1 MAFILSTSLPFRRSASARTTCAPRTTPLATAAAPRQQQPSNPTNNFDDAKPHKKASAPVVDSRVATRVEAHHWVAVKNTSLRIFERAAVAQADVAHQVDARTHSGALHRWLLREAEDPTHLFVNPTVPASDVRYVVMEAFDRHDHVLENQLVMRRWLSAVERVGPLMDAVQIQTLHYENAFTSKLHDVQFDPHHNIVVMESINVDISQDEAVDHVFDALRRSAEKSVSAGECLEFCVLHAPNEHGFFKTIEVFKNVAALQSHMNGTDVSTVQEITPYLIQGKRNRQTFKPVMFT 294
            MAFI +T L  R+S     T   R +P ATAA P      N        KPHKKA+A V+D  +ATRVEAHHW+AV +   R+FE AAVAQAD A QVDARTHSGALHRW+LRE EDP H+F+NP +P  + RYVVMEAF R +   ENQLVMRRWLSAVERVGPL+DAV IQTLHYEN FTSK+H+VQFDPHHNIVVMESINVD ++++A++ V +AL RSAEKSVSAGECLEFCVLHAPNEH FFKTIE++K+V AL SHMN TDV T +EI PYLIQG R RQTFKP++FT
Sbjct:    1 MAFITTTPLLHRQSTPNTLTSCSRKSPFATAATPSPASTPN-VQRQSTTKPHKKAAAHVIDFAIATRVEAHHWIAVNSPGARLFEHAAVAQADAARQVDARTHSGALHRWVLRETEDPAHIFLNPELPNHEARYVVMEAFSRDEPSFENQLVMRRWLSAVERVGPLVDAVDIQTLHYENVFTSKVHNVQFDPHHNIVVMESINVDTAKEKAMERVVEALERSAEKSVSAGECLEFCVLHAPNEHAFFKTIEIYKDVEALMSHMNATDVVTSEEIKPYLIQGNRKRQTFKPIIFT 293
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BLAST of Ggra7926.t1 vs. uniprot
Match: R7Q8E7 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q8E7_CHOCR)

HSP 1 Score: 270 bits (691), Expect = 8.870e-87
Identity = 142/263 (53.99%), Postives = 180/263 (68.44%), Query Frame = 0 
Query:   33 APRQQQPSNPTNNFDDAKPHKKASAPVVDSRVATRVEAHHWVAVKNTSLRIFERAAVAQADVAHQVDARTHSGALHRWLLREAEDPTHLFVNPTVPAS--DVRYVVMEAFDRHDHVLENQLVMRRWLSAVERVGPLMDAVQIQTLHYENAFTSKLHDVQFDPHHNIVVMESINVDISQDEAVDHVFDALRRSAEKSVSAGECLEFCVLHAPNEHGFFKTIEVFKNVAALQSHMNGTDVSTVQEITPYLIQGKRNRQTFKPVMF 293
            APRQ    +PT       P  +  APV+DSRVA+ +E+HHW+ V N   R+FERAAVAQAD+  QV+ R   GALHRW+LRE +DP  L   P  P S  D RYVVME F +     E+  +MRRWLSAVERVGP + AV I+T +YEN FTSKLHDV+FDP+ NIVV+ES+NVD+++    + V D LR +AE SVSAG CLEFCVLH P +HGFFKTI+V+KNV AL+ HM+  D    + +   +    R+R TF+PV+F
Sbjct:   48 APRQSHNISPT-------PRPRTRAPVIDSRVASVLESHHWIVVNNQGRRMFERAAVAQADMTRQVERRAQRGALHRWVLREVQDPIGL--GPAAPFSPKDSRYVVMETF-KATASAEDPGIMRRWLSAVERVGPSIHAVDIRTRNYENLFTSKLHDVKFDPNENIVVVESVNVDMARPHNAEEVVDILRSTAEASVSAGTCLEFCVLHKPGKHGFFKTIQVYKNVDALRQHMDSVDQVYTRRVQGRISDSHRSRHTFRPVVF 300
The following BLAST results are available for this feature:
BLAST of Ggra7926.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IVZ77.930e-13767.35Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q8E78.870e-8753.99Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.100coord: 112..290
e-value: 8.4E-8
score: 33.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..57
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 16..46
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..294
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
IPR011008Dimeric alpha-beta barrelSUPERFAMILY54909Dimeric alpha+beta barrelcoord: 208..291

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:447867..448751 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7926.t1Ggra7926.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 447867..448751 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7926.t1 ID=Ggra7926.t1|Name=Ggra7926.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=295bp
MAFILSTSLPFRRSASARTTCAPRTTPLATAAAPRQQQPSNPTNNFDDAK
PHKKASAPVVDSRVATRVEAHHWVAVKNTSLRIFERAAVAQADVAHQVDA
RTHSGALHRWLLREAEDPTHLFVNPTVPASDVRYVVMEAFDRHDHVLENQ
LVMRRWLSAVERVGPLMDAVQIQTLHYENAFTSKLHDVQFDPHHNIVVME
SINVDISQDEAVDHVFDALRRSAEKSVSAGECLEFCVLHAPNEHGFFKTI
EVFKNVAALQSHMNGTDVSTVQEITPYLIQGKRNRQTFKPVMFT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011008Dimeric_a/b-barrel