Ggra7904.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7904.t1
Unique NameGgra7904.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length544
Homology
BLAST of Ggra7904.t1 vs. uniprot
Match: A0A2V3J570 (Cysteine--tRNA ligase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J570_9FLOR)

HSP 1 Score: 777 bits (2006), Expect = 6.960e-279
Identity = 378/515 (73.40%), Postives = 446/515 (86.60%), Query Frame = 0
Query:   31 RQQAWSARASVRAHLSVPPATSNVD-ASSIENALQQHGLKFFNSMTRQKETFRTIEPGIVRFYSCGPTVYDFAHIGNFRAFLTYDVIKRWLIYKGYHVRHVMNLTDVDDKIIARIQREQCSAAQLTNRYADAFFDDLSLLNVIPADHYPRATQHIHHIEHFINGLKTRGYAYEKQGSTYFSVSSFEQYGRLAQLDKRECGSASASDSDEYDKDDVRDFALWKSHKGEDGNVFWDNSLGKGRPGWHIECSCMAMQYLGPQLDIHAGGIDLVFPHHENEIAQSEALTGKLFASFWLHNGFVNIDNEKMSKSLGNFRTLRDIVDKPDDARAFRYLVVASQYRSALAFTDKSLKSSRNTIKRLDALRTRLQDTVGVGGEEEIQRVVTDASQNFINAMDDDLNTPRAAAAMFSVVNAAEKMLKADKLGTNASKLVLDCLADMDRVFGIFYKPEISVEDSSSSE-EDSNAPEELVLLLEQRAQARKAKDFARADQIRDVITAAGFCIMDTPQGAKLQRIES 543
            R    + R   RA +SVP   ++ D A S+++   +  L FFNS+TRQKE F+T+EPG+VRFYSCGPTVYD+AHIGNFRAFLTYDVIKRWLI+KGY VRHVMNLTDVDDKIIAR+QRE+CSA +LT+RY++AFFDDL LLNVIPADHYPRATQHI HIE F+NGLK RGYAYE+QGSTYFSVSSF  YGRLAQLD+R+C +ASASDSDEYDKDD+RDFALWK++K EDG+V+W+NSLGKGRPGWHIECSCMAM+YLG +LDIHAGGIDLVFPHHENEIAQSEALTGK FASFWLHNGFVNIDNEKMSKSLGNFRTLRDIV   DDARAFRY+VV SQYRSALAFTDK LKS+R+TIKRL+AL+ RL++  G GG+ E++ +V  AS+NF+  MDDDLNTPRAAAAMFS+VN+AEKMLKA ++G +A+   L+CL DMD++FG+FY PE+ +   SS E +D+ AP ++V LLEQR +ARKAKDF RADQIRD+I A+GF ++DTPQGAKLQR+ES
Sbjct:   17 RHSYHTQRQIFRARVSVPHTKASSDEAVSVDSLGTESELVFFNSLTRQKEPFKTVEPGVVRFYSCGPTVYDYAHIGNFRAFLTYDVIKRWLIFKGYTVRHVMNLTDVDDKIIARVQREKCSAKELTDRYSNAFFDDLKLLNVIPADHYPRATQHIEHIETFVNGLKKRGYAYERQGSTYFSVSSFSDYGRLAQLDRRQCENASASDSDEYDKDDIRDFALWKTYKPEDGDVYWNNSLGKGRPGWHIECSCMAMEYLGSELDIHAGGIDLVFPHHENEIAQSEALTGKQFASFWLHNGFVNIDNEKMSKSLGNFRTLRDIVKNQDDARAFRYMVVTSQYRSALAFTDKCLKSARSTIKRLNALQKRLREAEGEGGKREMEEIVRSASENFVKGMDDDLNTPRAAAAMFSLVNSAEKMLKAGRIGKDAAMTALECLNDMDKLFGVFYTPELGLAGVSSEEAQDTEAPLQVVQLLEQRVEARKAKDFERADQIRDMIAASGFSVVDTPQGAKLQRVES 531          
BLAST of Ggra7904.t1 vs. uniprot
Match: R7QDF8 (Cysteine--tRNA ligase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDF8_CHOCR)

HSP 1 Score: 682 bits (1760), Expect = 6.790e-242
Identity = 338/507 (66.67%), Postives = 402/507 (79.29%), Query Frame = 0
Query:   47 VPPATSNVDASSIENALQQHGLKFFNSMTRQKETFRTIEPGIVRFYSCGPTVYDFAHIGNFRAFLTYDVIKRWLIYKGYHVRHVMNLTDVDDKIIARIQREQCSAAQLTNRYADAFFDDLSLLNVIPADHYPRATQHIHHIEHFINGLKTRGYAYEKQGSTYFSVSSFEQYGRLAQLDKRECGSASAS---------DSDEYDKDDVRDFALWKSHKGEDGNVFWDNSLGKGRPGWHIECSCMAMQYLGPQLDIHAGGIDLVFPHHENEIAQSEALTGKLFASFWLHNGFVNIDNEKMSKSLGNFRTLRDIVDKPDDARAFRYLVVASQYRSALAFTDKSLKSSRNTIKRLDALRTRLQDTVGVGGEEEIQRVVTDASQNFINAMDDDLNTPRAAAAMFSVVNAAEKMLKADKLGTNASKLVLDCLADMDRVFGIFYKPEI-SVEDSSSSEEDSNAPEELVLLLEQRAQARKAKDFARADQIRDVITAAGFCIMDTPQGAKLQRIES 543
            +P A +  D S  E    +  L  +N+++R KE F T+EPG+VRFYSCGPTVYD+AHIGNFRAFLTYDVIKRWL+ +GY ++HVMNLTD+DDKII +++   CS  +LTN+YADAFF DL LLNVIPA  YPRAT+HI  IE  + GL  RGYAYE+ GSTYFSV+ FE YGRLAQL+KRE GS +A+         DSD+YDK D+RDFALWKS+K  D  +FWD+ LGKGRPGWHIEC+CMA++YLGP+LDIH GGIDLVFPHHENE+AQSEALTG+ F+ FW+HNGFVNI+NEKMSKSLGNF+TLRDI  KPDDARAFRYLVV+SQYRSALAFTD+SLKS+R+T+KRLDALR RL+   G GGEE+I  V+  A +NF   MDDD NTPRAAAAMFSVVNAAEKMLKA K+   A+   L CL DMDRVFGIFY P I     +S+SE  + AP  LV LL++R  ARKAKDFARAD+IRD ++A GF I+DTPQG KL+ +ES
Sbjct:    1 MPAAVAKEDVSVWEERRAE--LLLYNTLSRTKEAFTTVEPGVVRFYSCGPTVYDYAHIGNFRAFLTYDVIKRWLLCRGYDIKHVMNLTDIDDKIIRKVRELGCSLDELTNKYADAFFADLDLLNVIPAQQYPRATEHIKEIEETVGGLVKRGYAYERDGSTYFSVAKFESYGRLAQLEKREKGSRTAAAEATEGENIDSDDYDKADMRDFALWKSYKTNDAGIFWDSPLGKGRPGWHIECTCMAIKYLGPELDIHGGGIDLVFPHHENELAQSEALTGRPFSRFWVHNGFVNINNEKMSKSLGNFQTLRDIAKKPDDARAFRYLVVSSQYRSALAFTDQSLKSARSTVKRLDALRKRLESAGGDGGEEDIAEVIAKAKENFARGMDDDFNTPRAAAAMFSVVNAAEKMLKAKKMNEKAAGSCLKCLDDMDRVFGIFYNPVIPGTTSASASEPPAEAPLHLVKLLDERKTARKAKDFARADEIRDQVSAEGFAIVDTPQGPKLEPLES 505          
BLAST of Ggra7904.t1 vs. uniprot
Match: A0A7S3E8V9 (Cysteine--tRNA ligase n=4 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3E8V9_9RHOD)

HSP 1 Score: 582 bits (1500), Expect = 1.290e-201
Identity = 307/545 (56.33%), Postives = 378/545 (69.36%), Query Frame = 0
Query:   35 WSARASVRAHLSVPPATSNVDASSIENALQQHGLKFFNSMTRQKETF-RTI-EPGIVRFYSCGPTVYDFAHIGNFRAFLTYDVIKRWLIYKGYHVRHVMNLTDVDDKIIARIQREQCSAAQLTNRYADAFFDDLSLLNVIPADHYPRATQHIHHIEHFINGLKTRGYAYEKQGSTYFSVSSFEQYGRLAQLDKRECGS--ASASDSDEYDKDDVRDFALWKSHKGEDGNVFWDNSLGKGRPGWHIECSCMAMQYLGPQLDIHAGGIDLVFPHHENEIAQSEALTGKLFASFWLHNGFVNIDNEKMSKSLGNFRTLRDIVDKPDDARAFRYLVVASQYRSALAFTDKSLKSSRNTIKRLDALRTRLQD------TVGVGGEEEIQRVVTDASQNFINAMDDDLNTPRAAAAMFSVVNAAEK------------------------MLKADKLGTNASKLVLDCLADMDRVFGIFYKP----EISVEDSSSSEEDSNAPEELVLLLEQRAQARKAKDFARADQIRDVITAAGFCIMDTPQGAKLQRI 541
            W +     +      A+  + AS++++         +N+MT +KE F RT+ E G+VRFYSCGPTVYD AH+GNFRAFLTYDV+KRWL Y+G+ V HVMNLTDVDDKII R+ RE  +  ++T +Y+  FFDDLSLLNVIPAD YPRAT HI  I   I GLK +G AYE  GSTYF V SF  YG+L +L+KRE G+    A+D+DEYDK D RDFALWK++K EDG V W+++LG GRPGWHIECSCMA++YLGPQ+DIH GGIDLVFPHHENEIAQSEA +GK FA FW+HNGFVNI  EKMSKSLGNFRTL D+V KPDDARAFRYLVV+SQYRS L FT+  LK++RNTIKRLD+LR RL D      TV +    EI+ +V  A   F+ AM+DDLNTPRA AA+F +++   K                        +LKA+KL +  +K+V DC+ D DRV G+FY+      +S ED +    D   PE L  LL QR +ARK+KDF+ ADQIRD I A G+ I D+P GA L +I
Sbjct:   15 WGSHGQAVSERRRSRASVLIRASAVDDKRTHGDFSLYNTMTGKKEVFDRTVHEDGVVRFYSCGPTVYDSAHVGNFRAFLTYDVLKRWLRYRGFDVSHVMNLTDVDDKIIKRVLREGSTLEEITEKYSKLFFDDLSLLNVIPADKYPRATDHIEDIVDLIEGLKAKGAAYETSGSTYFKVDSFSDYGKLVKLEKRESGARRTEANDTDEYDKSDARDFALWKAYKDEDGEVKWNSALGVGRPGWHIECSCMAIKYLGPQIDIHGGGIDLVFPHHENEIAQSEAYSGKEFARFWVHNGFVNIGGEKMSKSLGNFRTLGDVVKKPDDARAFRYLVVSSQYRSTLNFTEDVLKAARNTIKRLDSLRKRLADVQKEERTVDMQASSEIESIVDTAKSAFVAAMNDDLNTPRAVAALFEMMSKVGKVLVSAPNMRNPRPGHANWEFSVCQLLKAEKLDSAHAKMVDDCIVDFDRVLGVFYEVPTVGNVSDEDGTDGG-DQVIPEALQELLLQRTEARKSKDFSLADQIRDQIAAEGYQIKDSPNGAVLIKI 558          
BLAST of Ggra7904.t1 vs. uniprot
Match: A0A5J4YQ40 (Cysteine--tRNA ligase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YQ40_PORPP)

HSP 1 Score: 539 bits (1388), Expect = 8.020e-184
Identity = 278/515 (53.98%), Postives = 353/515 (68.54%), Query Frame = 0
Query:   62 ALQQHGLK---FFNSMTRQKETFRTIEPGIVRFYSCGPTVYDFAHIGNFRAFLTYDVIKRWLIYKGYHVRHVMNLTDVDDKIIARIQREQCSAAQLTNRYADAFFDDLSLLNVIPADHYPRATQHIHHIEHFINGLKTRGYAYEKQGSTYFSVSSFEQYGRLAQLDKRECGS------------------ASASDSDEYDKDDVRDFALWKSHKGEDGNVFWDNS-LGKGRPGWHIECSCMAMQYLGPQLDIHAGGIDLVFPHHENEIAQSEALTGKL-FASFWLHNGFVNIDNEKMSKSLGNFRTLRDIVDKPDDARAFRYLVVASQYRSALAFTDKSLKSSRNTIKRLDALRTRL-------QDTVGVGGEEEIQRVVTDASQNFINAMDDDLNTPRAAAAMFSVVNAAEKMLKADKLGTNASKLVLDCLADMDRVFGIFYKPEI-----SVEDSSSSEEDSNAPEELVLLLEQRAQARKAKDFARADQIRDVITAAGFCIMDTPQGAKLQRI 541
            ALQ+ G++   F+N+M+  K  F+++ PG+V  Y+CGPT+YDFAH+GNFRAFL YD++KRWL+Y+G+ V HVMNLTDV+DKIIA++ +      +LT  YA AFF D  +LN+IPAD YPRAT+HI  I   I+ LK RG+AY K GSTYFSV  F  YG+L +LD+R+ GS                  +  SDSDEYDK++  DFALWK++K EDG VFW+++ LGKGRPGWHIECSCMA++YLG  LDIHAGGIDLVFPHHENEIAQSEA  G   FA+FWLHNGFVNI  EKMSKSL NFRTLR IV    DARAFRYLVVASQYRS L  TD+ +K+++ TI+RLDALR RL       Q      G + +  V+    ++F+  MDDDLN+PRA A++F +VNA EK +KA ++    +   L+ L D +RV GIFY   I      +  +   E D      L  LL+QRA AR  KD++RAD+IRD + AAGF + DT  G +L R+
Sbjct:   98 ALQEIGVENIAFYNTMSEAKTPFKSVTPGVVNMYTCGPTIYDFAHVGNFRAFLMYDILKRWLLYRGFEVNHVMNLTDVEDKIIAKVAQSNVPLQELTEFYATAFFQDGQMLNIIPADLYPRATEHIGDIAEMIHTLKERGFAYSKDGSTYFSVDQFPTYGKLVKLDRRQGGSRPLSSDAQQEGETETPTHSQTSDSDEYDKENAADFALWKAYKSEDGQVFWEDAELGKGRPGWHIECSCMAVKYLGETLDIHAGGIDLVFPHHENEIAQSEAACGASPFANFWLHNGFVNIGGEKMSKSLKNFRTLRQIVSSELDARAFRYLVVASQYRSTLNLTDQVIKAAKGTIRRLDALRARLEAIRDASQSNTSSEGSDSVHEVLAKVRRDFVRHMDDDLNSPRAMASIFELVNATEKSIKASQMTQPLAAATLEFLDDANRVLGIFYSTAIYGECGEIRAADPVEADIEITPALAALLKQRADARTQKDWSRADEIRDQLAAAGFSVKDTAAGPELVRL 612          
BLAST of Ggra7904.t1 vs. uniprot
Match: A0A7S4UT40 (Cysteine--tRNA ligase n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4UT40_GUITH)

HSP 1 Score: 521 bits (1341), Expect = 8.340e-177
Identity = 269/538 (50.00%), Postives = 361/538 (67.10%), Query Frame = 0
Query:    9 SAAPLQRTSLLSVPLIEPHSFCRQQAWSARASVRAHLSVPPATSNVDASSIENALQQHGLKFFNSMTRQKETFRTI-EPG-IVRFYSCGPTVYDFAHIGNFRAFLTYDVIKRWLIYKGYHVRHVMNLTDVDDKIIARIQREQCSAAQLTNRYADAFFDDLSLLNVIPADHYPRATQHIHHIEHFINGLKTRGYAYEKQGSTYFSVSSFEQYGRLAQLDKRECGSASA-----SDSDEYDKDDVRDFALWKSHKGEDGNVFWDNSLGKGRPGWHIECSCMAMQYLGPQLDIHAGGIDLVFPHHENEIAQSEALTGKLFASFWLHNGFVNIDNEKMSKSLGNFRTLRDIVDKPDDARAFRYLVVASQYRSALAFTDKSLKSSRNTIKRLDALRTRLQDTVGVGGEEEIQRVVTDASQNFINAMDDDLNTPRAAAAMFSVVNAAEKMLKADKLGTNASKLVLDCLADMDRVFGIFYK-PEISVEDSSSSEEDSNAPEELVLLLEQRAQARKAKDFARADQIRDVITAAGFCIMDTPQGAKL 538
            ++ PL+++S  S+ +   H   R+     R S++       A++ V    +   L+  G K +N+++R KETF  + E G  V+ Y+CGPT+YDFAHIGNFRAFLTYDV+KRWL+Y GY V H+ NLTDVDDKII R++R+     +LT ++ADAFFDDL  LN+IPA  YPRAT+HI  I   INGL  +G AYEK GS YF VSSF  YG+LA+LD       ++     +D + ++K   +DFALWK++K EDG V W+  L KGRPGWHIECS M+ +YLG   DIHAGG+DL FPHHENEIAQSEA  G  +  +W+HNGFVNI+NEKMSKSLGNF TLR+    P+D RAFRYLVV+SQYR+AL F    L+ +RNT+KRLD  R RL +     G + I+ +      +F   M DDLNTPRA AA+F+ + + EK+L  D++    +KL L+ L ++DRV G+FY+ P  +  DS   +  + AP  L  LLE+R +A+  KDF RAD+IRD+I A G+ ++D+ +G+KL
Sbjct:   76 ASLPLKKSSSWSLSMTR-HGQARKSPLLPRWSMQQR----GASAAVGGGRVGEVLK--GFKIYNTLSRDKETFEPMCEDGKTVKMYTCGPTIYDFAHIGNFRAFLTYDVLKRWLLYCGYDVDHICNLTDVDDKIIQRMKRDNVGLKELTEKFADAFFDDLKRLNIIPARKYPRATEHIDDIVEMINGLVQKGNAYEKDGSYYFDVSSFPDYGKLARLDFDNMMDGASEGGGITDREGFEKKSSKDFALWKAYKPEDGEVTWETKLSKGRPGWHIECSAMSRRYLGDSFDIHAGGVDLTFPHHENEIAQSEAYCGCQYCRYWVHNGFVNINNEKMSKSLGNFLTLREAFKDPNDCRAFRYLVVSSQYRAALNFAPDVLQGARNTLKRLDKWRNRLLEVSMESGGQSIEEMAKKCRSDFEQGMMDDLNTPRACAALFTFIKSTEKLLNTDQIDKEGAKLALETLEEIDRVLGVFYEVPGTAPADSEGGDGAAEAPSHLQKLLEERLEAKAKKDFKRADEIRDLIAAEGYSVVDSKEGSKL 606          
BLAST of Ggra7904.t1 vs. uniprot
Match: A0A2E3J514 (Cysteine--tRNA ligase n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2E3J514_9BACT)

HSP 1 Score: 496 bits (1277), Expect = 3.690e-169
Identity = 237/473 (50.11%), Postives = 335/473 (70.82%), Query Frame = 0
Query:   68 LKFFNSMTRQKETFRTIEPGIVRFYSCGPTVYDFAHIGNFRAFLTYDVIKRWLIYKGYHVRHVMNLTDVDDKIIARIQREQCSAAQLTNRYADAFFDDLSLLNVIPADHYPRATQHIHHIEHFINGLKTRGYAYEKQGSTYFSVSSFEQYGRLAQLDKRECGS-ASASDSDEYDKDDVRDFALWKSHKGEDGNVFWDNSLGKGRPGWHIECSCMAMQYLGPQLDIHAGGIDLVFPHHENEIAQSEALTGKLFASFWLHNGFVNIDNEKMSKSLGNFRTLRDIVDKPDDARAFRYLVVASQYRSALAFTDKSLKSSRNTIKRLDALRTRLQDTVGVGGEEEIQRVVTDASQNFINAMDDDLNTPRAAAAMFSVVNAAEKMLKADKLGTNASKLVLDCLADMDRVFGIFYKPEISVEDSSSSEEDSNAPEELVLLLEQRAQARKAKDFARADQIRDVITAAGFCIMDTPQGAKLQ 539
            ++F+N+++RQKE F+ IE G V FYSCGPTV+D+AHIGNF+ F+ YD+IKR+L ++GY V HVMN+TDV+DKII ++  ++      T++Y++ FF++++LLN++PAD YP+AT+HI  +   I+ +   G+AY++ GS YFS+  F  YG LA+LD       AS +D DEY+K+D RDF LWK+ K EDG++FW++  GKGRPGWH+ECSCMAM+YLG  +DIHAG +DL+FPHH+NEIAQSEA+TGK F ++WLH   +N+D+ KMSKSLGNF T+ DI   PDDARAFRYLVV+S YR++  F+ ++L  +RNT++ L   R RL D   VGG  ++  +V+ A   F+  MDDDLN+PRA A++F +V+A E +L  D +  + + LV     ++D+V GIFY    S+ D    E      +EL  L+E+R  ARK K++ARAD+IRD     G+ + DTP G  L+
Sbjct:    3 IQFYNTLSRQKEPFKEIEDGKVTFYSCGPTVHDYAHIGNFKTFIVYDLIKRYLSFRGYEVSHVMNITDVEDKIIRKVVEQEQELEAFTSQYSEIFFEEMTLLNILPADRYPKATEHISEMLEMIHKMIEDGFAYKRDGSVYFSIGKFPSYGELARLDVEGMQEGASGTDLDEYEKEDARDFVLWKAWKEEDGDIFWESDFGKGRPGWHMECSCMAMKYLGETVDIHAGAVDLIFPHHQNEIAQSEAVTGKRFVNYWLHGAHINVDDTKMSKSLGNFLTISDIAKTPDDARAFRYLVVSSHYRTSFNFSKEALDGARNTMRHLRNFRNRLADVERVGGGADLTSLVSKARDGFVAHMDDDLNSPRAMASVFEMVSAVENLLGEDGVDRSGADLVDGLFQELDQVLGIFY----SLPDDDKEE---LLTDELQALVEEREVARKEKNWARADEIRDHFLGLGYVLEDTPGGPVLK 468          
BLAST of Ggra7904.t1 vs. uniprot
Match: W7U426 (Cysteine--tRNA ligase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U426_9STRA)

HSP 1 Score: 498 bits (1283), Expect = 2.570e-168
Identity = 271/534 (50.75%), Postives = 351/534 (65.73%), Query Frame = 0
Query:   30 CRQQAWSARASVRAHLSVPPATSNVDASSIENALQQH-GLKFFNSMTRQKETFRTIEPGIVRFYSCGPTVYDFAHIGNFRAFLTYDVIKRWLIYKGYHVRHVMNLTDVDDKIIARIQREQCSAAQLTNRYADAFFDDLSLLNVIPADHYPRATQHIHHIEHFINGLKTRGYAYEKQGSTYFSVSSFEQYGRLAQLD--KRECGSASA---SDSDEY--DKDDVRDFALWKSHKGEDGNVFWDNSLGKGRPGWHIECSCMAMQYLGPQLDIHAGGIDLVFPHHENEIAQSEALTGKLFASFWLHNGFVNIDNEKMSKSLGNFRTLRDIVDKPDDARAFRYLVVASQYRSALAFTDKSLKSSRNTIKRLDALRTRLQDTV--GVGGEE------EIQRVVTDASQNFINAMDDDLNTPRAAAAMFSVVNAAEKMLKAD--KLGTNASKLVLDCLADMDRVFGIFYKPEISVEDSSSSEED--------SNAPEELVLLLEQRAQARKAKDFARADQIRDVITAA-GFCIMDTPQGA 536
            CR+QA      +R   S+   +++   +   N L      + +N+ +R+KE F+T +PG V FYSCGPT+YDFAHIGNFRAFLTYDV+KRWL+Y GY V HV NLTDVDDKII R+ R+  S  +LT+++A  FF+DL  LNV+PA HYPRAT+HI  I   +  L  RGYAYE QGS YF VS F  YG LA+LD    E G+A     SD+DEY  DK D +DFALWK++K EDG VFW+ +LGKGRPGWHIECS MA ++LGP +D+HAGG+DLVFPHHENEIAQSE  +G+ F   W+HNGFVN++NEKMSKS GNF TLR  ++   D RAFRYLVV SQYR  L F  + L  +R TI RLD ++  L      G G EE      E+Q V+  A   F   M DDLNTPRAAAA+F++V A EK LK D  +L  + ++LVL  L  MD V GIFY+P +   +     E+        ++ P+E   L+ +RA+A++ +++A AD+ RD++ +  G  + D   GA
Sbjct:   56 CRRQA-----RLRTVFSMSSISASGSTARSRNFLTNDIPFQLYNTASRKKEPFKTGQPGKVSFYSCGPTIYDFAHIGNFRAFLTYDVLKRWLLYSGYDVEHVCNLTDVDDKIIKRMARDGLSLPELTDKFARVFFEDLQALNVLPASHYPRATEHIQDIVSMVQALVDRGYAYESQGSFYFRVSRFPSYGSLAKLDFSGMEMGAAKGGGISDADEYVADKGDAKDFALWKAYKAEDGPVFWETALGKGRPGWHIECSAMARRFLGPTVDLHAGGVDLVFPHHENEIAQSEGASGERFCRCWVHNGFVNVENEKMSKSKGNFLTLRGSLETGLDVRAFRYLVVTSQYRMPLNFNTEGLAGARKTILRLDKVKAALTRVAREGKGAEEGGEIDEEMQGVIDKAVAGFEAGMADDLNTPRAAAALFTLVKATEKALKGDSPRLRPSGARLVLATLEQMDAVLGIFYEPPLMEGEKEGGREEGAPVVVELADVPKEAQELVMRRAEAKEKREWALADENRDLLRSRFGLILKDKKGGA 584          
BLAST of Ggra7904.t1 vs. uniprot
Match: D7FX39 (Cysteine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX39_ECTSI)

HSP 1 Score: 479 bits (1234), Expect = 1.060e-161
Identity = 261/509 (51.28%), Postives = 325/509 (63.85%), Query Frame = 0
Query:   65 QHGLKFFNSMTRQKETFRTIEPGIVRFYSCGPTVYDFAHIGNFRAFLTYDVIKRWLIYKGYHVRHVMNLTDVDDKIIARIQREQCSAAQLTNRYADAFFDDLSLLNVIPADHYPRATQHIHHIEHFINGLKTRGYAYEKQGSTYFSVSSFEQYGRLAQLDKR-------ECGSASASDSDEYDKDDVRDFALWKSHKGEDGNVFWDNSLGKGRPGWHIECSCMAMQYLGPQLDIHAGGIDLVFPHHENEIAQSEALTGKLFASFWLHNGFVNIDNEKMSKSLGNFRTLRDIVDKPDDARAFRYLVVASQYRSALAFTDKSLKSSRNTIKRLDALRTRLQDTVGVGGEEE----------IQRVVTDASQNFINAMDDDLNTPRAAAAMFSVVNAAEKMLK------ADKLGTNAS--------------KLVLDCLADMDRVFGIFYKPE-----ISVEDSSSSEEDSNAPEELVLLLEQRAQARKAKDFARADQIRDVITAAGFCIMD 531
            + GL  FN+  R KE FR  +   V+FYSCGPTVYD AHIGNFRAFLTYDV+KRWL+Y+G+ V HV NLTDVDDKIIAR+ R+  S  +LT +YA  FFDDL  LN++PA  YPRAT+HI  I   + GL  +  AY+  GS YF VS   +YG LA LD         E G  + +   E +K+D +DFALWK +K EDG VFWD  LGKGRPGWHIECS MA ++LG  LD+HAGGIDLVFPHHENE+AQSE  TGK F   W+HN FVN+D EKMSKS GNF TL+  +    D RAFRYLVV+SQYR+ L F+ KSL+S++NT++RLD LR  L+     G EEE          +  VV  + + F   M+DDLNTPRAAA++F+VV A E  LK      AD   T A+              K +L  L  MD VFGIFY+P       +  DS    ++++ P E+  LL +R  AR+ KD+A AD +RD I A G+ + D
Sbjct:   16 ESGLMLFNTEGRTKERFRPQDRRRVKFYSCGPTVYDMAHIGNFRAFLTYDVLKRWLLYQGFEVDHVCNLTDVDDKIIARMARDGVSLEELTGKYAKLFFDDLESLNIVPASRYPRATEHIDDIVEMVQGLIDKELAYKVNGSVYFRVSKHGKYGTLACLDTSGMEDGAGEGGGVNDAAEFESEKEDAKDFALWKGYKPEDGEVFWDTLLGKGRPGWHIECSAMARKFLGDTLDVHAGGIDLVFPHHENEVAQSEGFTGKPFCRCWVHNAFVNVDGEKMSKSKGNFLTLKSTLATALDVRAFRYLVVSSQYRTTLGFSMKSLQSAKNTLRRLDKLRVALEAAAAAGNEEERGDASEVSRELLEVVPKSLEGFDAGMNDDLNTPRAAASLFAVVKAGENALKRVRSANADGGDTAAAGGSPPQSLLPQVDAKYLLAALDRMDSVFGIFYEPAGYEAANTGGDSGGDGKEADLPGEMAELLARRLAARENKDWATADAVRDEIKALGYSVKD 524          
BLAST of Ggra7904.t1 vs. uniprot
Match: M1V6X1 (Cysteine--tRNA ligase n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1V6X1_CYAM1)

HSP 1 Score: 479 bits (1232), Expect = 4.380e-161
Identity = 244/484 (50.41%), Postives = 324/484 (66.94%), Query Frame = 0
Query:   70 FFNSMTRQKETFRTIEP-GIVRFYSCGPTVYDFAHIGNFRAFLTYDVIKRWLIYKGYHVRHVMNLTDVDDKIIARIQREQCSAAQLTNRYADAFFDDLSLLNVIPADHYPRATQHIHHIEHFINGLKTRGYAYEKQGSTYFSVSSFEQYGRLAQLDKRECGSASASDSDEYD----KDDVRDFALWKSHKGEDGNVFWDNSLGKGRPGWHIECSCMAMQYLGPQLDIHAGGIDLVFPHHENEIAQSEALTGKLFASFWLHNGFVNIDNEKMSKSLGNFRTLRDIVDKPDDARAFRYLVVASQYRSALAFTDKSLKSSRNTIKRLDALRTRLQD-------TVGVGGEEEIQRVVTDASQNFINAMDDDLNTPRAAAAMFSVVNAAEKMLKADKLGTNASKLVLDCLADMDRVFGIFYKPEISVEDSSSSEEDSNAPEELVLLLEQRAQARKAKDFARADQIRDVITAAGFCIMDTPQGAKLQRI 541
            F+N+++R+KE F T    G+VRFYSCGPTVYD+AHIGNFRAFLTYD++KRWL++ GY VRHVMN+TDVDDKII R QREQ  A  +T ++A  FF DL  LN+IPAD YP AT HI  +   +  L +RG+AY+   S Y+SV  F +YG LA+++     S++  + D       K D RDF LWK HK +DG+V WD  +G GRPGWH EC+ MAM+YLG  +DIHAGG DLVFPHHENEIAQ EA+TG +FA FW+HNGFVNI+ EKMSKSLGN+ TLRD+V  P DARAFRY V+ S YR  L FTD +L ++  T++RLD  R  + D       T G   ++ ++       ++F + M DDLNT RAAA +F  +   E + +  +L    + L+L  L +MDRVFG+FY+PE++    +S    +  P E++ L   RA AR  +DFA AD++R+ +   GF + DT QG ++ R+
Sbjct:   73 FYNTLSRRKEPFETSSADGVVRFYSCGPTVYDYAHIGNFRAFLTYDLVKRWLMFCGYKVRHVMNITDVDDKIIQRSQREQRRAEDITRQFAAEFFQDLKALNIIPADAYPCATAHIDDMADLVRELLSRGFAYKLGDSVYYSVERFARYGTLARINFESLLSSNGEEEDAGPHTALKRDPRDFVLWKGHKPDDGDVKWDTPIGCGRPGWHTECAAMAMKYLGSSVDIHAGGSDLVFPHHENEIAQCEAVTGTMFARFWIHNGFVNINGEKMSKSLGNYITLRDLVRDPLDARAFRYAVITSLYRMPLNFTDDTLGAAATTLRRLDLFRKSIIDLERSEASTPGQKADQGLRASCEAYLRDFCDHMADDLNTARAAAVIFEALRHFEALRRDARLRPADASLILGMLREMDRVFGVFYEPELAHLSETSEPSSTGIPPEVLELARLRADARARRDFAMADKLREQLRLYGFAVRDTAQGPEITRL 556          
BLAST of Ggra7904.t1 vs. uniprot
Match: A0A2E7MKK0 (Cysteine--tRNA ligase n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2E7MKK0_9BACT)

HSP 1 Score: 465 bits (1197), Expect = 4.650e-157
Identity = 226/470 (48.09%), Postives = 319/470 (67.87%), Query Frame = 0
Query:   68 LKFFNSMTRQKETFRTIEPGIVRFYSCGPTVYDFAHIGNFRAFLTYDVIKRWLIYKGYHVRHVMNLTDVDDKIIARIQREQCSAAQLTNRYADAFFDDLSLLNVIPADHYPRATQHIHHIEHFINGLKTRGYAYEKQGSTYFSVSSFEQYGRLAQLDKRECGSASASDSDEYDKDDVRDFALWKSHKGEDGNVFWDNSLGKGRPGWHIECSCMAMQYLGPQLDIHAGGIDLVFPHHENEIAQSEALTGKLFASFWLHNGFVNIDNEKMSKSLGNFRTLRDIVDKPDDARAFRYLVVASQYRSALAFTDKSLKSSRNTIKRLDALRTRLQDTVGVGGEEEIQRVVTDASQNFINAMDDDLNTPRAAAAMFSVVNAAEKMLKADKLGTNASKLVLDCLADMDRVFGIFYKPEISVEDSSSSEEDSNAPEELVLLLEQRAQARKAKDFARADQIRDVITAAGFCIMDTPQGAK 537
            L+ FN+++R KE F+ +  G VR YSCGPTVYD+AHIGNFRAF+  D++KR+L Y GY V HVMN+TDV+DKII R++RE     +LT++Y D FF +L+ LNV  AD YPRAT+HI+ +   +  L+ RG AYE++GS YFS+  F QYG LA LD        + D+DEYDKD+ RDF LWK+   +DG V+W++  G+GRPGWH+ECSCM+M+YLG   DIH GG+DL+FPHH+NEIAQSE ++G+ F  FW+HN F+N+++EKMSKSLGNF  L DI    +D +A+RYL+V + YR  + FT + L +++N ++R   L+ RL    G  G E+    +  A   F   +DDDLNTP A AA++ +VN  E+ L  D+LG + ++ + + LA++++V GIFY  +        +E+    PEEL  LLE+R  AR  K++ +AD +R+ +  AG  I D+P G +
Sbjct:    2 LRLFNTLSRSKEEFKPLADGKVRMYSCGPTVYDYAHIGNFRAFVLADLLKRYLRYSGYSVFHVMNITDVEDKIIDRLRREGIGLKELTSKYEDIFFAELTKLNVDRADLYPRATEHINEMVQLVTQLRERGLAYEREGSVYFSIDKFPQYGELANLDVAGLQVGISVDADEYDKDNARDFVLWKARVEDDGEVYWESPFGQGRPGWHLECSCMSMKYLGQSFDIHTGGVDLIFPHHQNEIAQSEGVSGQPFVRFWIHNEFLNVNDEKMSKSLGNFYRLEDISKGSEDIKAYRYLLVTNHYRRKMNFTFELLAAAKNNLRRFARLQQRLVGVEGERGREDWPEQIATARAEFRLQLDDDLNTPAAMAAIWGLVNKVERALGKDELGHSQARTIGEFLAEINQVLGIFYDLQ------DGAEKPETLPEELAKLLEERDLARSEKNWTQADLLREKLLEAGVEIKDSPAGTQ 465          
The following BLAST results are available for this feature:
BLAST of Ggra7904.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J5706.960e-27973.40Cysteine--tRNA ligase n=1 Tax=Gracilariopsis chord... [more]
R7QDF86.790e-24266.67Cysteine--tRNA ligase n=1 Tax=Chondrus crispus Tax... [more]
A0A7S3E8V91.290e-20156.33Cysteine--tRNA ligase n=4 Tax=Rhodosorus marinus T... [more]
A0A5J4YQ408.020e-18453.98Cysteine--tRNA ligase n=1 Tax=Porphyridium purpure... [more]
A0A7S4UT408.340e-17750.00Cysteine--tRNA ligase n=1 Tax=Guillardia theta Tax... [more]
A0A2E3J5143.690e-16950.11Cysteine--tRNA ligase n=1 Tax=Gemmatimonadetes bac... [more]
W7U4262.570e-16850.75Cysteine--tRNA ligase n=2 Tax=Monodopsidaceae TaxI... [more]
D7FX391.060e-16151.28Cysteine--tRNA ligase n=1 Tax=Ectocarpus siliculos... [more]
M1V6X14.380e-16150.41Cysteine--tRNA ligase n=1 Tax=Cyanidioschyzon mero... [more]
A0A2E7MKK04.650e-15748.09Cysteine--tRNA ligase n=1 Tax=Gemmatimonadetes bac... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 541..543
NoneNo IPR availableGENE3D1.20.120.1910coord: 372..540
e-value: 4.3E-32
score: 113.4
NoneNo IPR availableSUPERFAMILY52374Nucleotidylyl transferasecoord: 69..383
IPR024909Cysteinyl-tRNA synthetase/mycothiol ligasePRINTSPR00983TRNASYNTHCYScoord: 127..136
score: 53.64
coord: 259..277
score: 59.57
coord: 290..311
score: 76.24
coord: 91..102
score: 60.98
IPR024909Cysteinyl-tRNA synthetase/mycothiol ligasePANTHERPTHR10890CYSTEINYL-TRNA SYNTHETASEcoord: 64..538
IPR015273Cysteinyl-tRNA synthetase, class Ia, DALRSMARTSM00840dalr_2_4coord: 417..480
e-value: 1.2E-6
score: 38.1
IPR015273Cysteinyl-tRNA synthetase, class Ia, DALRPFAMPF09190DALR_2coord: 417..476
e-value: 6.5E-12
score: 45.8
IPR032678tRNA synthetases class I, catalytic domainPFAMPF01406tRNA-synt_1ecoord: 82..382
e-value: 7.6E-108
score: 360.4
IPR032678tRNA synthetases class I, catalytic domainCDDcd00672CysRS_corecoord: 69..374
e-value: 1.60502E-106
score: 316.058
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620HUPscoord: 51..371
e-value: 2.7E-126
score: 422.8
IPR015803Cysteine-tRNA ligaseTIGRFAMTIGR00435TIGR00435coord: 68..540
e-value: 4.4E-144
score: 478.9
IPR015803Cysteine-tRNA ligaseHAMAPMF_00041Cys_tRNA_synthcoord: 68..541
score: 34.334885
IPR009080Aminoacyl-tRNA synthetase, class Ia, anticodon-bindingSUPERFAMILY47323Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasescoord: 404..538

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:403150..404781 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7904.t1Ggra7904.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 403150..404781 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7904.t1 ID=Ggra7904.t1|Name=Ggra7904.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=544bp
MSESIAFTSAAPLQRTSLLSVPLIEPHSFCRQQAWSARASVRAHLSVPPA
TSNVDASSIENALQQHGLKFFNSMTRQKETFRTIEPGIVRFYSCGPTVYD
FAHIGNFRAFLTYDVIKRWLIYKGYHVRHVMNLTDVDDKIIARIQREQCS
AAQLTNRYADAFFDDLSLLNVIPADHYPRATQHIHHIEHFINGLKTRGYA
YEKQGSTYFSVSSFEQYGRLAQLDKRECGSASASDSDEYDKDDVRDFALW
KSHKGEDGNVFWDNSLGKGRPGWHIECSCMAMQYLGPQLDIHAGGIDLVF
PHHENEIAQSEALTGKLFASFWLHNGFVNIDNEKMSKSLGNFRTLRDIVD
KPDDARAFRYLVVASQYRSALAFTDKSLKSSRNTIKRLDALRTRLQDTVG
VGGEEEIQRVVTDASQNFINAMDDDLNTPRAAAAMFSVVNAAEKMLKADK
LGTNASKLVLDCLADMDRVFGIFYKPEISVEDSSSSEEDSNAPEELVLLL
EQRAQARKAKDFARADQIRDVITAAGFCIMDTPQGAKLQRIES*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024909Cys-tRNA/MSH_ligase
IPR015273Cys-tRNA-synt_Ia_DALR
IPR032678tRNA-synt_1_cat_dom
IPR014729Rossmann-like_a/b/a_fold
IPR015803Cys-tRNA-ligase
IPR009080tRNAsynth_Ia_anticodon-bd