Ggra7897.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7897.t1
Unique NameGgra7897.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length601
Homology
BLAST of Ggra7897.t1 vs. uniprot
Match: A0A2V3IX31 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX31_9FLOR)

HSP 1 Score: 214 bits (546), Expect = 3.690e-58
Identity = 439/629 (69.79%), Postives = 455/629 (72.34%), Query Frame = 0
Query:    1 MSRYNDYDSRLPRRSGGYGAAYDADRNRXXXXXXERPDRSHERDRAPRDDYSSRAPIPTIPASAAYDTYRPPSLQSRS-SRSAYDTYRXGASSAXXXXXXXXXXXXXXXXXXXXXXXXXXXTRPSRPPPRSAXXXXXXXXXXXXXXXXXXXXXXXXXTERPPAXXXXXXXXXXXXXXXXXXXXXXXXGGR-------EMPVAKDNDYSAYETYRPPANPSNEYMRKLEKYAGVS-VPSRER----ERGRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSADEIA------DMSKAVVPVNPGNLGATAFGTDPNTFPDLMGGADMTHAQELAMEPTAADFANLPGEVPETQSQALSLAGRFPQLGSAVTTPFGAGVMTNQGVMSQMGMGAPXXXXXXXXXXXXXXXXMQG----------MNPMNGSMGMGMPAXXXXXXXXXXXXGANMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQMPINGGAAQPDLMTPFAGMNLGGNQNAF 600
            MSR+NDYDSR  RR GGY AAYDADR  XXXXXX         DR  RDDYSSRAPIPTIPAS AYDTYRPPS Q +  SR        GA   XXXXXXXXXXXXXXXXXXXXX          RPP RSAXXXXXXXXX      XXXXXXXXXX      XXXX              XXXXXX          +MPVAK NDYSAYETYRPPANPS EY++KLE+YAGV+  P+R+R    ER R    XXXXXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            D++KA+VPVNP  LGATAFGTD NTFPDLMGG D+  AQE   EPTAADFANLPGEVPE  SQALSLAGRFPQLGSAVTTPFG GVMTNQGVM QMGM  P        XXXXXXXXMQ                G+MGM   A            G   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QMP+NGG  Q DLMTPFAGMNLGGNQ+ F
Sbjct:    1 MSRHNDYDSRAVRRPGGY-AAYDADRXXXXXXXXXX-------DRPTRDDYSSRAPIPTIPASEAYDTYRPPSAQGKPPSRXXXXXXXPGAPXXXXXXXXXXXXXXXXXXXXXXX---------GRPPARSAXXXXXXXXXPGGRPPXXXXXXXXXXXXXXXXXXXXRSNPYDTYRQDDRAXXXXXXXXXXXXXPEPQMPVAKGNDYSAYETYRPPANPSKEYLKKLERYAGVAPAPARDRRSRAERRRDYDNXXXXXXXXXXXXXXXXXXXXXXXXXXGRKSSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDITKAIVPVNPQALGATAFGTDMNTFPDLMGGPDL--AQENVPEPTAADFANLPGEVPENHSQALSLAGRFPQLGSAVTTPFGPGVMTNQGVMPQMGM--PASGMPGMGXXXXXXXXMQAPPGXXXXXXXXXXXTGAMGMQSGAMPNT--------GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQMPVNGGGQQ-DLMTPFAGMNLGGNQDTF 599          
BLAST of Ggra7897.t1 vs. uniprot
Match: R7QDH8 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDH8_CHOCR)

HSP 1 Score: 134 bits (336), Expect = 7.270e-30
Identity = 130/235 (55.32%), Postives = 142/235 (60.43%), Query Frame = 0
Query:  376 SADEIADM-SKAVVPVNPGNLGATAFGTDPNTFPDLMGGADMTHAQELAMEPTAADFANLPGEVPETQSQALSLAGRFPQLGSAVTTPFGAGVMTNQGVMSQMGMGAPXXXXXXXXXXXXXXXXMQGMNP---------MNGSMGMGMPAXXXXXXXXXXXXGANMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQMPINGGAAQPDLMTPFAGMNLGGNQNAF 600
            SAD++AD+ S+AVV V+PG LGATAFGT  NTFPDLMGG ++          TA DFAN+PGE+PE Q+   SLAGRFPQLGSAVTTPFG GVMT QG M Q GMG  XXXXX              MNP         M    GMGMP XXXXXX XXXXX                       XXXXXXXXXXXXXX   XXX    + GG  Q DLMTPF GMNLGGNQ+ F
Sbjct:  305 SADDVADITSRAVVTVDPGALGATAFGTSQNTFPDLMGGPEIDIT--TGATATANDFANMPGEIPEQQAPLGSLAGRFPQLGSAVTTPFGPGVMTAQGAMPQGGMGXXXXXXXMGMQPG------MAMNPXXXXXXXXXMGMQGGMGMPGXXXXXXAXXXXX-----------------------XXXXXXXXXXXXXXGIPXXXXXXXMQGGNTQQDLMTPFGGMNLGGNQDTF 508          
The following BLAST results are available for this feature:
BLAST of Ggra7897.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IX313.690e-5869.79Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QDH87.270e-3055.32Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 240..260
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..386
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 328..357
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..101
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 137..152
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 224..246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:275190..276992 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7897.t1Ggra7897.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 275190..276992 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7897.t1 ID=Ggra7897.t1|Name=Ggra7897.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=601bp
MSRYNDYDSRLPRRSGGYGAAYDADRNRDRERSRERPDRSHERDRAPRDD
YSSRAPIPTIPASAAYDTYRPPSLQSRSSRSAYDTYRPGASSASSSSAYD
TYRPPAAAPASASAYDTYRPTRPSRPPPRSAASAYDTYRPSGRSNPPSSA
YDTYRPTERPPASSAYDTYRPSDRAPGGSEYDTYRPGGREMPVAKDNDYS
AYETYRPPANPSNEYMRKLEKYAGVSVPSRERERGRQNRRNDYESESEES
SEEEEEKRSKSRKKKASRKKSSRKRKNKKAHTSDESEEEEEDESETESDV
EDSAEDSSEEESESDEDSEEEDRRRKKSSKRKSSKSKKSSKSDRKKKSSK
KSIKKKKKKRSDDSDESSPSDSEEESADEIADMSKAVVPVNPGNLGATAF
GTDPNTFPDLMGGADMTHAQELAMEPTAADFANLPGEVPETQSQALSLAG
RFPQLGSAVTTPFGAGVMTNQGVMSQMGMGAPGMGAPGMGAPGMGTPGMQ
GMNPMNGSMGMGMPASMGMPNMAGGMGGANMMGGAGAMAGMQPNMAMGGG
MGMPGAMGMPGAMGMPGAMGAQMPINGGAAQPDLMTPFAGMNLGGNQNAF
*
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