Ggra7892.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7892.t1
Unique NameGgra7892.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length203
Homology
BLAST of Ggra7892.t1 vs. uniprot
Match: A0A2V3IVZ9 (Transmembrane emp24 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVZ9_9FLOR)

HSP 1 Score: 372 bits (954), Expect = 2.340e-129
Identity = 181/202 (89.60%), Postives = 194/202 (96.04%), Query Frame = 0
Query:    1 MKGSRLFSLILLTIVLCGRRTSALNFKISPKETLCFHEITHKGNKVLAFFDVLSWGYGAYVYLHVNAPSGREIQKFEAQSEGRVEFIASEDGEHSFCFKNAYSETEVSFWVNTETDSALSDVAREEHVNDMVYSVEKLNSLVSAARVDLEAFKAREHHHRETADKNRRRVTFWAIIECLLILAVAGVQIMRIRNFFEYKRIV 202
            MK S +F+LILL + LC   +SALNFKISPKETLCFHEITHKGNKVLAFFDVLSWGYGAYVYLHVNAPSGREIQKFEAQSEGRVEF+A+EDGEHSFCFKNAY+ETEVSFW+NTETDSALSDVA+EEHVNDMVYSVEKLNSLVSAARVDLEAFKAREHHHR+TADKNRRRVTFWAI+ECLLIL VAGVQIMRIRNFFE+KR+V
Sbjct:   27 MKASHIFTLILLALSLCSTPSSALNFKISPKETLCFHEITHKGNKVLAFFDVLSWGYGAYVYLHVNAPSGREIQKFEAQSEGRVEFVATEDGEHSFCFKNAYTETEVSFWINTETDSALSDVAKEEHVNDMVYSVEKLNSLVSAARVDLEAFKAREHHHRDTADKNRRRVTFWAIVECLLILGVAGVQIMRIRNFFEHKRMV 228          
BLAST of Ggra7892.t1 vs. uniprot
Match: R7QQB3 (Member of emp24/gp25L/p24 family/GOLD family n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQB3_CHOCR)

HSP 1 Score: 342 bits (878), Expect = 3.570e-118
Identity = 168/195 (86.15%), Postives = 185/195 (94.87%), Query Frame = 0
Query:    9 LILLTIVLCGRRTS-ALNFKISPKETLCFHEITHKGNKVLAFFDVLSWGYGAYVYLHVNAPSGREIQKFEAQSEGRVEFIASEDGEHSFCFKNAYSETEVSFWVNTETDSALSDVAREEHVNDMVYSVEKLNSLVSAARVDLEAFKAREHHHRETADKNRRRVTFWAIIECLLILAVAGVQIMRIRNFFEYKRIV 202
            L+ L +VL G  +S ALNFKI+PKETLCFHEITHKGNKVLAFFDVLSWGYGAYVYLHV +PSGREI+K+EA+SEGRVEFIA+EDGEH+FCFKNA +ETEVSFW+NTE+DSALSDVA+EEHVNDMVYSVEKLNSLVSAARVDLEAFKAREHHHR+TADKNRRRVTFWA +EC LILAVAGVQIMRIRNFFEYKR+V
Sbjct:    8 LLALALVLAGFSSSDALNFKIAPKETLCFHEITHKGNKVLAFFDVLSWGYGAYVYLHVTSPSGREIKKYEAESEGRVEFIATEDGEHNFCFKNAQTETEVSFWINTESDSALSDVAKEEHVNDMVYSVEKLNSLVSAARVDLEAFKAREHHHRKTADKNRRRVTFWAFVECFLILAVAGVQIMRIRNFFEYKRMV 202          
BLAST of Ggra7892.t1 vs. uniprot
Match: A0A1X6NKS8 (GOLD domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NKS8_PORUM)

HSP 1 Score: 289 bits (739), Expect = 8.280e-97
Identity = 135/180 (75.00%), Postives = 162/180 (90.00%), Query Frame = 0
Query:   23 ALNFKISPKETLCFHEITHKGNKVLAFFDVLSWGYGAYVYLHVNAPSGREIQKFEAQSEGRVEFIASEDGEHSFCFKNAYSETEVSFWVNTETDSALSDVAREEHVNDMVYSVEKLNSLVSAARVDLEAFKAREHHHRETADKNRRRVTFWAIIECLLILAVAGVQIMRIRNFFEYKRIV 202
            ALNFKI PK+ LCFHEITHKGNKVLAFFDV+SWGYGAYV L V APSG+++Q F ++SEGRV+F A+EDGE +FCFKNAYSETEVSFW+NTETD  L+DVA+EEHV+D+VYSVE+LNS+V+AA+VDLE+FK+RE  HR+TA  NRRRVTFWA+ ECLL+LAVA  Q++RIRNFFE+KRIV
Sbjct:   36 ALNFKIQPKDELCFHEITHKGNKVLAFFDVVSWGYGAYVTLEVTAPSGKQLQSFVSESEGRVDFTAAEDGEFNFCFKNAYSETEVSFWINTETDVGLADVAKEEHVSDLVYSVERLNSMVNAAKVDLESFKSREARHRQTAHSNRRRVTFWAVTECLLVLAVAVAQVVRIRNFFEFKRIV 215          
BLAST of Ggra7892.t1 vs. uniprot
Match: A0A7S0XJF6 (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XJF6_9RHOD)

HSP 1 Score: 255 bits (652), Expect = 1.420e-83
Identity = 124/187 (66.31%), Postives = 148/187 (79.14%), Query Frame = 0
Query:   14 IVLCGRRTSALNFKISPKETLCFHEITHKGNKVLAFFDVLSWGYGAYVYLHVNAPSGREIQKFEAQSEGRVEFIASEDGEHSFCFKNAYSETEVSFWVNTETDSALSDVAREEHVNDMVYSVEKLNSLVSAARVDLEAFKAREHHHRETADKNRRRVTFWAIIECLLILAVAGVQIMRIRNFFEYKR 200
            +VL  R    L+F+++  + LCFHEITHK NKVLAFFDV+SWGYGAYVY+ V  P+   I+ F+A+SEGRVEF A  DGE+SFCF N Y+ TEVSFWVN E D  L+DV +EEHVNDMVYSVE+LNSLVSAA++DL +FKARE  HR+TA+ NRRRVT WA IEC+LI+ VAGVQI RIR  FE KR
Sbjct:   27 VVLSVREADGLSFELTAGKELCFHEITHKSNKVLAFFDVVSWGYGAYVYVKVKDPNLNVIKSFDAESEGRVEFTAEADGEYSFCFHNPYTATEVSFWVNIENDFGLADVIKEEHVNDMVYSVERLNSLVSAAKIDLSSFKAREARHRQTAESNRRRVTAWAAIECVLIVLVAGVQIYRIRKLFENKR 213          
BLAST of Ggra7892.t1 vs. uniprot
Match: A0A5J4Z3J5 (Transmembrane emp24 domain-containing protein p24beta3 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3J5_PORPP)

HSP 1 Score: 252 bits (643), Expect = 2.450e-82
Identity = 118/183 (64.48%), Postives = 150/183 (81.97%), Query Frame = 0
Query:   19 RRTSALNFKISP-KETLCFHEITHKGNKVLAFFDVLSWGYGAYVYLHVNAPSGREIQKFEAQSEGRVEFIASEDGEHSFCFKNAYSETEVSFWVNTETDSALSDVAREEHVNDMVYSVEKLNSLVSAARVDLEAFKAREHHHRETADKNRRRVTFWAIIECLLILAVAGVQIMRIRNFFEYKR 200
            R  S L+F I P ++ LCF+E+THK NKVLAFFDV+SWGYGAYVYL V +P G  I+KFEA+SEGR++F+A EDGE++FCF N+Y+ TEVSFWVN E D  LS V +EEHVNDMVY+VE+LNSLVSAA++DL +FKARE  HR+TA+ NRRRV +W+++EC LI+AVA  Q++RIR  FE +R
Sbjct:   22 RVVSGLSFSIEPGQKPLCFYELTHKQNKVLAFFDVVSWGYGAYVYLEVKSPRGMIIKKFEAESEGRIDFVAEEDGEYTFCFSNSYAATEVSFWVNIENDFGLSQVIKEEHVNDMVYAVERLNSLVSAAKIDLASFKAREARHRKTAESNRRRVMYWSLVECALIVAVAAAQVVRIRKLFENRR 204          
BLAST of Ggra7892.t1 vs. uniprot
Match: A0A136J6H6 (Emp24/gp25L/p24 family/GOLD n=2 Tax=Microdochium TaxID=67608 RepID=A0A136J6H6_9PEZI)

HSP 1 Score: 88.2 bits (217), Expect = 3.940e-18
Identity = 53/186 (28.49%), Postives = 93/186 (50.00%), Query Frame = 0
Query:   22 SALNFKISPKETLCFHEITHKGNKVLAFFDVLSWGYGAYVYLHVNAPSGREIQKFEAQSEGRVEFIASEDGEHSFCFKN---AYSETEVSFWVNTETDSALSDVARE----EHVNDMVYSVEKLNSLVSAARVDLEAFKAREHHHRETADKNRRRVTFWAIIECLLILAVAGVQIMRIRNFFEYKR 200
            +AL +K+SP E  CF+  T K    +AF+  +  G    V   V  P GR I   E + +G   F A++ GE+ FCF N    Y+E  V F +  E +      A++    E    +  S+ K++  +S      + F+ RE+ +  T      R+  +++I+C++++A+ G+Q+  +R FF+  R
Sbjct:   21 TALTYKLSPHEEACFYASTEKTGTKMAFYFAVQSGGSFDVNYEVTGPGGRIILDGEKERQGDFVFTANDAGEYKFCFANDMSTYTEKFVDFEIAVEDEVRAKLPAKQGTSPEQTTQLEESIYKISGQLSTITRSQKYFRTRENRNFATVRSTEGRIFKFSLIQCIMVVAMGGLQVFVVRFFFQGAR 206          
BLAST of Ggra7892.t1 vs. uniprot
Match: A0A6G1I492 (GOLD domain-containing protein n=1 Tax=Trichodelitschia bisporula TaxID=703511 RepID=A0A6G1I492_9PEZI)

HSP 1 Score: 88.2 bits (217), Expect = 3.940e-18
Identity = 58/187 (31.02%), Postives = 101/187 (54.01%), Query Frame = 0
Query:   22 SALNFKISPKETLCFH-EITHKGNKVLAFFDVLSWGYGAYVYLHVNAPSGREIQKFEAQSEGRVEFIASEDGEHSFCFKN---AYSETEVSFWVNTETDSALSDVARE----EHVNDMVYSVEKLNSLVSAARVDLEAFKAREHHHRETADKNRRRVTFWAIIECLLILAVAGVQIMRIRNFFEYKR 200
            +AL +K+ P E  CF+ ++T +G KV  +F V S G     Y  V  PS R I +   + +G   F A++ GE+ FCF N    +++  V F +  E +S     +++    E  + +  S+ KL+S +S    + + F+ RE+ +  T     RR+  ++IIE L+++A+AG+Q+  +R FF+  R
Sbjct:   21 TALTYKLQPNEKSCFYTQVTQRGAKVAFYFAVQSGGSFDVDY-SVVGPSARIIMEGSKERQGDFVFTANDVGEYRFCFNNEMSTFADKTVDFEIAVENESRAQIPSKQGSSPEQTSVLEESIIKLSSQLSTIHRNQKYFRTRENRNFSTVRSTERRIFNFSIIESLMMVAMAGLQVFIVRFFFQGAR 206          
BLAST of Ggra7892.t1 vs. uniprot
Match: A0A804IV69 ((wild Malaysian banana) hypothetical protein n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804IV69_MUSAM)

HSP 1 Score: 87.4 bits (215), Expect = 8.750e-18
Identity = 56/189 (29.63%), Postives = 96/189 (50.79%), Query Frame = 0
Query:   17 CGRRTSALNFKISPKETLCFHEI------THKGNKVLAFFDVLSWGYG-AYVYLHVNAPSGREIQKFEAQSEGRVEFIASEDGEHSFCFKNAYSETE-VSFWVNTETDSALSDVAREEHVNDMVYSVEKLNSLVSAARVDLEAFKAREHHHRETADKNRRRVTFWAIIECLLILAVAGVQIMRIRNFFE 197
            C RR SAL+  ++  E  C +E       T  GN V+   D+  WG     + L V +P+G  +   +  S  + +F A   G + FCF NA    E VSF+++        D+A++EH++ +   + +L   + +   +    KARE  HR T +  R+R+TF+ ++E L++   +G+Q++ IR  F 
Sbjct:   23 CPRRLSALSVTVNDLE--CVYEFVPYEGDTVSGNFVVVDHDIF-WGSDHPGIDLIVTSPAGNTVHTMKGTSGDKFDFKAPRAGMYKFCFHNANRAPETVSFYIHVGHIPNEHDLAKDEHLDPINVKIAQLREALESVTAEQRYLKAREARHRHTNESTRKRLTFYTVMEYLVLACASGLQVVYIRRLFN 208          
BLAST of Ggra7892.t1 vs. uniprot
Match: transmembrane emp24 domain-containing protein p24beta3-like n=2 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4B6F88 (transmembrane emp24 domain-containing protein p24beta3-like n=2 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4B6F88)

HSP 1 Score: 86.3 bits (212), Expect = 2.350e-17
Identity = 56/196 (28.57%), Postives = 98/196 (50.00%), Query Frame = 0
Query:    9 LILLTIVLCGRRTSALNFKISPKETLCFHEI------THKGNKVLAFFDVLSWGYGAYVYLHVNAPSGREIQKFEAQSEGRVEFIASEDGEHSFCFKNAYSETE-VSFWVNTETDSALSDVAREEHVNDMVYSVEKLNSLVSAARVDLEAFKAREHHHRETADKNRRRVTFWAIIECLLILAVAGVQIMRIRNFFE 197
            LI++ +V C RR  AL+  ++  E  C +E       T  GN V+   D+        + L V +P+G  +   +  S  + EF A   G + FCF N     E VSF+++        D+A++EH++ +   + +L   + +   +    KARE  HR T +  RRR+T++ I+E +++   +G+Q++ IR  F 
Sbjct:   14 LIVVLLVGCPRRLYALSVTVNDVE--CVYEFVVYEGDTISGNFVVVDHDIFWNSDHPGIDLIVTSPAGNTVHSLKGTSGDKFEFKAPRSGMYKFCFHNPNRTPETVSFYIHVGHIPNEHDIAKDEHLDPINVKIAQLREALESVTAEQRYLKARELRHRHTNESTRRRLTYYTIMEYVVLALASGLQVVYIRRLFN 207          
BLAST of Ggra7892.t1 vs. uniprot
Match: A0A517KZH2 (GOLD domain-containing protein n=3 Tax=Venturia TaxID=5024 RepID=A0A517KZH2_9PEZI)

HSP 1 Score: 85.9 bits (211), Expect = 2.970e-17
Identity = 56/187 (29.95%), Postives = 99/187 (52.94%), Query Frame = 0
Query:   22 SALNFKISPKETLCFH-EITHKGNKVLAFFDVLSWGYGAYVYLHVNAPSGREIQKFEAQSEGRVEFIASEDGEHSFCFKN---AYSETEVSFWVNTETDSALSDVARE----EHVNDMVYSVEKLNSLVSAARVDLEAFKAREHHHRETADKNRRRVTFWAIIECLLILAVAGVQIMRIRNFFEYKR 200
            +AL +K+ P E  CF   + HKG K+  +F V S G     YL V AP+ R + + E +  G   F A+E GE+ FCF N    ++E  V F +  E +      +++    E  + +  S+ K++S +S    + + F+ RE+ +  T     +R+  ++I+E L+++ +AG+Q+  +R FF+  R
Sbjct:   21 TALTYKVQPYEKACFFANVDHKGAKIAFYFAVQSGGSFDIDYL-VVAPNERVVMRGEKEKSGDFVFTANEVGEYRFCFDNEMSTFAEKNVDFEIAVENEVRAQLPSKQGSTPEQTSILEESILKISSQLSTINRNQKYFRTRENRNFSTVRSTEKRIFNFSILEGLVMITMAGLQVFVVRFFFQGAR 206          
The following BLAST results are available for this feature:
BLAST of Ggra7892.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVZ92.340e-12989.60Transmembrane emp24 domain-containing protein n=1 ... [more]
R7QQB33.570e-11886.15Member of emp24/gp25L/p24 family/GOLD family n=1 T... [more]
A0A1X6NKS88.280e-9775.00GOLD domain-containing protein n=1 Tax=Porphyra um... [more]
A0A7S0XJF61.420e-8366.31Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
A0A5J4Z3J52.450e-8264.48Transmembrane emp24 domain-containing protein p24b... [more]
A0A136J6H63.940e-1828.49Emp24/gp25L/p24 family/GOLD n=2 Tax=Microdochium T... [more]
A0A6G1I4923.940e-1831.02GOLD domain-containing protein n=1 Tax=Trichodelit... [more]
A0A804IV698.750e-1829.63(wild Malaysian banana) hypothetical protein n=1 T... [more]
transmembrane emp24 domain-containing protein p24beta3-like n=2 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4B6F882.350e-1728.57transmembrane emp24 domain-containing protein p24b... [more]
A0A517KZH22.970e-1729.95GOLD domain-containing protein n=3 Tax=Venturia Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009038GOLD domainSMARTSM01190EMP24_GP25L_2coord: 23..197
e-value: 2.1E-39
score: 146.9
IPR009038GOLD domainPFAMPF01105EMP24_GP25Lcoord: 23..197
e-value: 4.1E-36
score: 124.6
IPR009038GOLD domainPROSITEPS50866GOLDcoord: 33..113
score: 13.590491
IPR015720Transmembrane emp24 domain-containing proteinPANTHERPTHR22811TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEINcoord: 6..199
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 170..190
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..169
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 191..202
NoneNo IPR availableTMHMMTMhelixcoord: 170..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000073_piloncontigtig00000073_pilon:258989..260017 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7892.t1Ggra7892.t1Gracilaria gracilis GNS1m malemRNAtig00000073_pilon 258989..260017 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7892.t1 ID=Ggra7892.t1|Name=Ggra7892.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=203bp
MKGSRLFSLILLTIVLCGRRTSALNFKISPKETLCFHEITHKGNKVLAFF
DVLSWGYGAYVYLHVNAPSGREIQKFEAQSEGRVEFIASEDGEHSFCFKN
AYSETEVSFWVNTETDSALSDVAREEHVNDMVYSVEKLNSLVSAARVDLE
AFKAREHHHRETADKNRRRVTFWAIIECLLILAVAGVQIMRIRNFFEYKR
IV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009038GOLD_dom
IPR015720Emp24-like