Ggra7797.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7797.t1
Unique NameGgra7797.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length506
Homology
BLAST of Ggra7797.t1 vs. uniprot
Match: A0A2V3IZK4 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZK4_9FLOR)

HSP 1 Score: 144 bits (362), Expect = 3.530e-33
Identity = 150/523 (28.68%), Postives = 241/523 (46.08%), Query Frame = 0
Query:    4 GDAVLPEEIKTYLQDLRCAAHSQTVQASPKPYSLFLDEDWRKWKERLQHIRQDVHESMLKYEFEKQAHALLDKIEAFHDDFSNQYFRSHATWIYYYESSWLNAIFKTGSG-VGNAEGVLTKRLRRYSKTLADMFKALKEGITHGWELVVAPLSHLDLLKWLEASKKTPSFVSYLLKA--IIGVAAAP-------ILMFINDPVLYRQGIHCLIGVSFLYIVSFLFKQ-ILKLMAVLPSVLPWGNGQGRRMIRRAPVEDTMNFSEVGNNKTEGSQTLCSRGPKNDNMERIQLKPSSRPLEVETVRTRPK-ETPVERTP-LFPLSREN--------LSSTSNESEVSFKMAKASKGITRKGIH-VRSINDHGPIPRAKVTDSIRVGGRRINMVYDTEDGGLVEDSGDEIVAVVSSSKENDVNQTGKPVAKKHATQAGNRSDAEYSDMMRGRAVQRKARRRPEDSKRILVDASNASHTTEDTRVLRSRTNSITTKSTDGLSKRDAKEKSAIPRRRSARLSAVHMNE 504
             + +L E ++ YL DL      +T + S    SLF +E+W KWK RL  IR +++   LK    +   A+++K++ F +DF +Q FR+H TW+Y  E SWL  + +T +  + N +   T++L+  S  +   F   K  +          L  L        S+K     + +L+   ++G  +         I  F   P+ +   +   +G   + I  +LF++ IL L++         N + R  +R AP       +  GNN T  S T+ S          I       P++ +   T+P+   P    P +  L  EN           +S E+  SFK    S G+ R+G H   SI++ GP+ R  V +S+RVG RR+N+ Y+ +      D  DE++A+V S++ +   +    + KK  +++ +R     S        QR  R    D+K  L  ASN S  T+ TRVLRS+ N   T++TD L+      KS++PRR SARLS  H  E
Sbjct:  183 NNLLLSEGVRQYLLDLP----RRTGRGSVLDSSLFPEEEWNKWKTRLTQIRHEINLLQLKNVPYEYKDAVVEKLDGFLEDFYDQLFRTHITWMYSKERSWLEHVMETSAAKISNVKSSGTEKLQYMSNMVTGTFVNGKRALLQALAEKAMELEELG-----RRSQKNIHLRAGILQPFHVVGNLSLENIDFGGFIDSFSGKPIAHATSLAFALGGILILIAIYLFEERILALISGTRRSRRIQNSRRRNRVRGAP-------NNTGNNNT--SVTVSSS---------ILPLQGQTPVQQQRYPTQPRLPNPSASHPEVVVLDDENEPHQPGGDRPGSSPETATSFK--GPSNGVNRRGRHNFVSISELGPVRRPTVAESLRVGNRRVNIAYEGQANDDNHDEDDEVIAIVQSAQGSHQKRPRNIITKKKTSRSESRKGILESQKALDGVPQRTTRL-SRDTKGSLTGASNLSFLTDQTRVLRSKAN---TRTTDALANHRGVGKSSLPRRHSARLSTSHSKE 672          
The following BLAST results are available for this feature:
BLAST of Ggra7797.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IZK43.530e-3328.68Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 423..448
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 477..492
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 449..476
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 397..505
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..171
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 172..192
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 198..218
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 219..505
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 193..197
NoneNo IPR availableTMHMMTMhelixcoord: 196..218
NoneNo IPR availableTMHMMTMhelixcoord: 170..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:616393..617910 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7797.t1Ggra7797.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 616393..617910 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7797.t1 ID=Ggra7797.t1|Name=Ggra7797.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=506bp
MIEGDAVLPEEIKTYLQDLRCAAHSQTVQASPKPYSLFLDEDWRKWKERL
QHIRQDVHESMLKYEFEKQAHALLDKIEAFHDDFSNQYFRSHATWIYYYE
SSWLNAIFKTGSGVGNAEGVLTKRLRRYSKTLADMFKALKEGITHGWELV
VAPLSHLDLLKWLEASKKTPSFVSYLLKAIIGVAAAPILMFINDPVLYRQ
GIHCLIGVSFLYIVSFLFKQILKLMAVLPSVLPWGNGQGRRMIRRAPVED
TMNFSEVGNNKTEGSQTLCSRGPKNDNMERIQLKPSSRPLEVETVRTRPK
ETPVERTPLFPLSRENLSSTSNESEVSFKMAKASKGITRKGIHVRSINDH
GPIPRAKVTDSIRVGGRRINMVYDTEDGGLVEDSGDEIVAVVSSSKENDV
NQTGKPVAKKHATQAGNRSDAEYSDMMRGRAVQRKARRRPEDSKRILVDA
SNASHTTEDTRVLRSRTNSITTKSTDGLSKRDAKEKSAIPRRRSARLSAV
HMNET*
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