Ggra7744.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7744.t1
Unique NameGgra7744.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length216
Homology
BLAST of Ggra7744.t1 vs. uniprot
Match: A0A2V3IWM7 (Peptidylprolyl isomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWM7_9FLOR)

HSP 1 Score: 278 bits (711), Expect = 2.960e-92
Identity = 143/217 (65.90%), Postives = 168/217 (77.42%), Query Frame = 0
Query:    2 AFSSSVPVGQVSRLSRNHPRNGLSSLR-MKLEPVADA--KLSRRAFVAVFASLPIAYISKSAHGVPDYDAIRTRRYVDLGRPPADRRPPTFVENVPVYPIDQLKVQDIVVGDGDTVKNGSLVVARWVTVLDNGSTLDDSNENRPALFRPGAHQVPPGIEDAVVGMRVGGVRRVYGTAERILTNIMLGYDIGERSPVPNQSNIYIDLFVDRVDPYGTR 215
            AFS SV     SR  R   R+ +S+   M + P  D+    SRRA +A+ AS     I + A  VP YDA++T+RYVDLGRPP DR+PPTF++  PV+PID L+ QD+ VG GD VK G+LVVARWVTVLDNGSTLDDSNE  PA+FRPGAHQVPPG+EDAV+GMRVGGVRRVYGTAERILTN+ LGYDIGERS VPN SN+YIDL+VD+VDPYGTR
Sbjct:    7 AFSFSVTARSKSRYVR---RSQISNRPLMNVAPSTDSCQSTSRRALLALIASCAALQIRRPAESVPIYDAMKTKRYVDLGRPPPDRKPPTFIDGQPVFPIDTLQAQDLTVGKGDAVKKGTLVVARWVTVLDNGSTLDDSNEAHPAVFRPGAHQVPPGVEDAVIGMRVGGVRRVYGTAERILTNVTLGYDIGERSLVPNASNVYIDLYVDQVDPYGTR 220          
BLAST of Ggra7744.t1 vs. uniprot
Match: R7QEP8 (Peptidylprolyl isomerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QEP8_CHOCR)

HSP 1 Score: 177 bits (449), Expect = 1.880e-51
Identity = 94/186 (50.54%), Postives = 125/186 (67.20%), Query Frame = 0
Query:   39 LSRRAFVAVFASLPIAYISKSAHGVPD-------YDAIRTRRYVDLGRPPADRRPPTFVENVPVYPIDQ-LKVQDIVVGDGDT-VKNGSLVVARWVTVLDNGSTLDDSNENRPALFRPGAHQVPPGIEDAVVGMRVGGVRRVYGTAERILTNIMLGYDIGERSPVPNQSNIYIDLFVDRVDPYGTR 215
            LSRR  +++  +  +   +  A            YDAIRTRR+V +GR P DR  P F     ++ ++  L+ QD+ +G GD  VK GSLVVARW  VL++GST+D +NE +  +FRPGAHQVP GIED+V+GMR GG R V GT+ERIL NI  GY+IGERS VPN +N++ID+ VDR+DP+G R
Sbjct:  120 LSRRVVLSMLVASAVGAATSKAQAAQSEETEENSYDAIRTRRHVGIGRFPPDRPAPAFEPGKKLFQVNAGLEGQDVKIGQGDIYVKPGSLVVARWAMVLEDGSTVDAANEKQAGIFRPGAHQVPSGIEDSVIGMRPGGKRLVKGTSERILANITTGYNIGERSLVPNGANVFIDISVDRIDPFGER 305          
BLAST of Ggra7744.t1 vs. uniprot
Match: A0A2V7U094 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7U094_9BACT)

HSP 1 Score: 63.5 bits (153), Expect = 1.750e-9
Identity = 41/102 (40.20%), Postives = 53/102 (51.96%), Query Frame = 0
Query:  104 QDIVVGDGDTVKNGSLVVARWVTVLDNGSTLDDS-NENRPALFRPGAHQVPPGIEDAVVGMRVGGVRRVYGTAERILTNIMLGYDIGERSPVPNQSNIYIDL 204
            QD+VVG G T   G  V   +V  L +GS  D S + N+P  F+ GA QV  G +  VVGMRVGG RR+      I  N  LGY      P+P  S +  ++
Sbjct:   24 QDLVVGTGATAATGDTVTVNYVGTLTDGSKFDSSYDRNQPFTFKLGAGQVIAGWDQGVVGMRVGGKRRL-----TIPPN--LGYGSQRNGPIPASSTLIFEI 118          
BLAST of Ggra7744.t1 vs. uniprot
Match: C5YHA0 (Peptidylprolyl isomerase n=3 Tax=Andropogoneae TaxID=147429 RepID=C5YHA0_SORBI)

HSP 1 Score: 64.3 bits (155), Expect = 6.510e-9
Identity = 43/125 (34.40%), Postives = 68/125 (54.40%), Query Frame = 0
Query:   56 ISKSAHGVPDYDAIRTRRYVDLGRPP------ADRRPPTFVENVPVYPIDQ-LKVQDIVVGDGDTVKNGSLVVARWVTVLDNGSTLDDSNEN-RPALFRPGAHQVPPGIEDAVVGMRVGGVRRVY 172
            +  SA G+  +DA+        G PP       D    T +ENVP+   +  L+ +DI VG+G +   G  V A +V ++ NG   D S E  +P +FR G+ QV  G+++ ++ M+VGG+RR+Y
Sbjct:   83 LGASALGLAAFDAVAA------GLPPEEKPKLCDAACETELENVPMVTTESGLQYKDIKVGEGPSPPIGFQVAANYVAMVPNGQIFDSSLEKGQPYIFRVGSGQVIKGLDEGILSMKVGGLRRLY 201          
BLAST of Ggra7744.t1 vs. uniprot
Match: A0A1M5EM94 (Peptidyl-prolyl cis-trans isomerase n=4 Tax=Alteromonadaceae TaxID=72275 RepID=A0A1M5EM94_9ALTE)

HSP 1 Score: 60.8 bits (146), Expect = 1.300e-8
Identity = 36/107 (33.64%), Postives = 59/107 (55.14%), Query Frame = 0
Query:   99 DQLKVQDIVVGDGDTVKNGSLVVARWVTVLDNGSTLDDSNEN-RPALFRPGAHQVPPGIEDAVVGMRVGGVRRVYGTAERILTNIMLGYDIGERSPVPNQSNIYIDL 204
            +Q++++D+VVG+G  VK G+L+ A +   LD+G+  D S E  RP       ++V  G    + GMRVGG R+++  AE       L Y   +   +P  SN+Y ++
Sbjct:    3 EQIRIEDVVVGEGCEVKKGALITAHYRGFLDDGTEFDSSYEKGRPFQTVLSKNKVIQGWFQGLQGMRVGGTRKLWVPAE-------LAYGERQVGKIPPNSNLYFEI 102          
BLAST of Ggra7744.t1 vs. uniprot
Match: A0A6M4IZ23 (Peptidyl-prolyl cis-trans isomerase n=2 Tax=Gemmatimonas groenlandica TaxID=2732249 RepID=A0A6M4IZ23_9BACT)

HSP 1 Score: 60.5 bits (145), Expect = 1.720e-8
Identity = 40/107 (37.38%), Postives = 55/107 (51.40%), Query Frame = 0
Query:   99 DQLKVQDIVVGDGDTVKNGSLVVARWVTVLDNGSTLDDSNENRPALFRPGAHQVPPGIEDAVVGMRVGGVRR-VYGTAERILTNIMLGYDIGERSPVPNQSNIYIDL 204
            D L VQD+VVG G     G ++   +   L NGS  D +      +F  GA QV PG +  VVGM+VGG R+ V G+A        LGY    +SP+P  + +  D+
Sbjct:    6 DNLYVQDLVVGTGAEAIAGRVIRVTYTGWLVNGSRFDTNVGGAAFIFTLGAQQVIPGWDQGVVGMKVGGKRKLVIGSA--------LGYGNQGQSPIPANATLVFDV 104          
BLAST of Ggra7744.t1 vs. uniprot
Match: A0A8J5WBP2 (Uncharacterized protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5WBP2_ZIZPA)

HSP 1 Score: 63.2 bits (152), Expect = 1.910e-8
Identity = 34/85 (40.00%), Postives = 54/85 (63.53%), Query Frame = 0
Query:   90 VENVPVYPIDQ-LKVQDIVVGDGDTVKNGSLVVARWVTVLDNGSTLDDSNEN-RPALFRPGAHQVPPGIEDAVVGMRVGGVRRVY 172
            +ENVP+   +  L+ +DI VG+G +   G  V A +V ++ NG   D S E  RP +FR G+ QV  G+++ ++ M+VGG+RR+Y
Sbjct:  129 LENVPMVTTESGLQYKDIKVGEGPSPPVGFQVAANYVAMVPNGQIFDSSLEKGRPYIFRVGSGQVVKGLDEGILSMKVGGLRRLY 213          
BLAST of Ggra7744.t1 vs. uniprot
Match: A0A811R4B9 (Peptidylprolyl isomerase n=1 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811R4B9_9POAL)

HSP 1 Score: 64.3 bits (155), Expect = 1.970e-8
Identity = 43/125 (34.40%), Postives = 68/125 (54.40%), Query Frame = 0
Query:   56 ISKSAHGVPDYDAIRTRRYVDLGRPP------ADRRPPTFVENVPVYPIDQ-LKVQDIVVGDGDTVKNGSLVVARWVTVLDNGSTLDDSNEN-RPALFRPGAHQVPPGIEDAVVGMRVGGVRRVY 172
            +  SA G+  +DA+        G PP       D    T +ENVP+   +  L+ +DI VG+G +   G  V A +V ++ NG   D S E  +P +FR G+ QV  G+++ ++ M+VGG+RR+Y
Sbjct:   81 LGASALGLAAFDAVAA------GLPPEEKPKLCDASCETELENVPMVTTESGLQYKDIKVGEGPSPPIGFQVAANYVAMVPNGQIFDSSLEKGQPYIFRVGSGQVIKGLDEGILSMKVGGLRRLY 199          
BLAST of Ggra7744.t1 vs. uniprot
Match: A0A7W0YXZ2 (Peptidyl-prolyl cis-trans isomerase n=1 Tax=Geodermatophilaceae bacterium TaxID=1882271 RepID=A0A7W0YXZ2_9ACTN)

HSP 1 Score: 61.2 bits (147), Expect = 2.160e-8
Identity = 38/101 (37.62%), Postives = 56/101 (55.45%), Query Frame = 0
Query:   73 RYVDLGRPPADRRPPTFVENVPVYPIDQLKVQDIVVGDGDTVKNGSLVVARWVTVLDNGSTLDDSNENR--PALFRPGAHQVPPGIEDAVVGMRVGGVRRV 171
            R+  L  PP        V+     P   L++QD+VVGDGD   +GS ++A +V V  +G    D++ NR  P  F+ G  +V  G +D +VGM+VGG RR+
Sbjct:   18 RHPRLREPPVTEPTRPDVDPPEGPPPTDLQIQDLVVGDGDKAVSGSHIMAHYVGVTHSGGEEFDASWNRGQPLTFQLGVGRVIKGWDDGIVGMKVGGRRRL 118          
BLAST of Ggra7744.t1 vs. uniprot
Match: K3YJF4 (Peptidylprolyl isomerase n=7 Tax=Paniceae TaxID=147428 RepID=K3YJF4_SETIT)

HSP 1 Score: 62.8 bits (151), Expect = 2.220e-8
Identity = 42/125 (33.60%), Postives = 68/125 (54.40%), Query Frame = 0
Query:   56 ISKSAHGVPDYDAIRTRRYVDLGRPP------ADRRPPTFVENVPVYPIDQ-LKVQDIVVGDGDTVKNGSLVVARWVTVLDNGSTLDDSNEN-RPALFRPGAHQVPPGIEDAVVGMRVGGVRRVY 172
            +  SA G+  +DA+        G PP       D    + +ENVP+   +  L+ +DI VG+G +   G  V A +V ++ NG   D S E  +P +FR G+ QV  G+++ ++ M+VGG+RR+Y
Sbjct:   79 LGASALGLAAFDAVAA------GLPPEEKPKLCDAACESELENVPMVTTESGLQYKDIKVGEGPSPPIGFQVAANYVAMVPNGQIFDSSLEKGQPYIFRVGSGQVIQGLDEGILSMKVGGLRRLY 197          
The following BLAST results are available for this feature:
BLAST of Ggra7744.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IWM72.960e-9265.90Peptidylprolyl isomerase n=1 Tax=Gracilariopsis ch... [more]
R7QEP81.880e-5150.54Peptidylprolyl isomerase n=1 Tax=Chondrus crispus ... [more]
A0A2V7U0941.750e-940.20Peptidyl-prolyl cis-trans isomerase n=1 Tax=Acidob... [more]
C5YHA06.510e-934.40Peptidylprolyl isomerase n=3 Tax=Andropogoneae Tax... [more]
A0A1M5EM941.300e-833.64Peptidyl-prolyl cis-trans isomerase n=4 Tax=Altero... [more]
A0A6M4IZ231.720e-837.38Peptidyl-prolyl cis-trans isomerase n=2 Tax=Gemmat... [more]
A0A8J5WBP21.910e-840.00Uncharacterized protein n=1 Tax=Zizania palustris ... [more]
A0A811R4B91.970e-834.40Peptidylprolyl isomerase n=1 Tax=Miscanthus lutari... [more]
A0A7W0YXZ22.160e-837.62Peptidyl-prolyl cis-trans isomerase n=1 Tax=Geoder... [more]
K3YJF42.220e-833.60Peptidylprolyl isomerase n=7 Tax=Paniceae TaxID=14... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.10.50.40coord: 98..207
e-value: 2.1E-16
score: 61.8
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 96..173
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00254FKBP_Ccoord: 113..172
e-value: 3.0E-9
score: 37.0
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50059FKBP_PPIASEcoord: 117..210
score: 10.383778

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:315257..316034 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7744.t1Ggra7744.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 315257..316034 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7744.t1 ID=Ggra7744.t1|Name=Ggra7744.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=216bp
MAFSSSVPVGQVSRLSRNHPRNGLSSLRMKLEPVADAKLSRRAFVAVFAS
LPIAYISKSAHGVPDYDAIRTRRYVDLGRPPADRRPPTFVENVPVYPIDQ
LKVQDIVVGDGDTVKNGSLVVARWVTVLDNGSTLDDSNENRPALFRPGAH
QVPPGIEDAVVGMRVGGVRRVYGTAERILTNIMLGYDIGERSPVPNQSNI
YIDLFVDRVDPYGTR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001179PPIase_FKBP_dom