Ggra7736.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7736.t1
Unique NameGgra7736.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length109
Homology
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BLAST of Ggra7736.t1 vs. uniprot
Match: A0A2V3IH00 (rRNA biogenesis protein RRP5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IH00_9FLOR)

HSP 1 Score: 99.4 bits (246), Expect = 5.060e-22
Identity = 49/78 (62.82%), Postives = 62/78 (79.49%), Query Frame = 0 
Query:   20 ISEDVSLALLHESEVDQDRFVSNTFDEWEVGQEITAIVIKVRNGRVSVEPKRCYYEAIYMNDDEVSAVLEETDKARSQ 97
            I++D+S ALLH+SEVDQDRF+ NTFDEW VGQ +TAIVIK  NG+  +  KRCY+EA  +N   VSA+LE+ DKA+SQ
Sbjct: 1572 IAKDMS-ALLHKSEVDQDRFIENTFDEWVVGQRVTAIVIKAENGKYRLGTKRCYFEAAGLNASVVSAILEQNDKAKSQ 1648
The following BLAST results are available for this feature:
BLAST of Ggra7736.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IH005.060e-2262.82rRNA biogenesis protein RRP5 n=1 Tax=Gracilariopsi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 88..108
NoneNo IPR availableGENE3D2.40.50.140coord: 19..77
e-value: 1.5E-5
score: 27.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:258277..258693 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7736.t1Ggra7736.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 258277..258693 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7736.t1 ID=Ggra7736.t1|Name=Ggra7736.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=109bp
MEKSSLKLSMVLRKRPRRKISEDVSLALLHESEVDQDRFVSNTFDEWEVG
QEITAIVIKVRNGRVSVEPKRCYYEAIYMNDDEVSAVLEETDKARSQAKS
RNSELNEI*
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