Ggra7728.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7728.t1
Unique NameGgra7728.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length205
Homology
BLAST of Ggra7728.t1 vs. uniprot
Match: A0A2V3IWM8 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWM8_9FLOR)

HSP 1 Score: 319 bits (817), Expect = 8.160e-109
Identity = 153/204 (75.00%), Postives = 178/204 (87.25%), Query Frame = 0
Query:    1 MVFFPSEFIPEYRPAKKHSVFSSNGWWLNRWPILGWLEAFIKVAAWIAVPHVRTHIPEQIPTLSPSAAVQLAVMLVASILLLFAVIDRLVYREIISMIFVFPNNWAHWTVTLALYQCGREGINSKYFRIFCWLMFAGDVVKLVFFAFHDFSRIGVGLYVLVFLTALFAAMYGVILLLDYGYGSLWAIRAAKALALDTLFTRLRR 204
            MVFFPSEFIPEYRPAKK+SV SSNGWW+NRWP+LGWLE F+KVAAWIAVP++     E+IP+LSP  AV+L++ML+AS+LL  A+IDRLVYREI+SMIFVFPNNWAHW+VT+ALYQ GR+GIN KYFRIFCWLM  GD+VKL+FFA HDFSRIGV +YV   LTALFAAMYG IL+LDYGYG+ WA+ AAKAL+L T F RLRR
Sbjct:    1 MVFFPSEFIPEYRPAKKYSVLSSNGWWMNRWPLLGWLETFVKVAAWIAVPYIPAQRTERIPSLSPQVAVELSIMLLASVLLAVAIIDRLVYREILSMIFVFPNNWAHWSVTMALYQHGRDGINGKYFRIFCWLMLTGDIVKLLFFAVHDFSRIGVAIYVFYVLTALFAAMYGAILVLDYGYGTPWALSAAKALSLQTFFERLRR 204          
BLAST of Ggra7728.t1 vs. uniprot
Match: A0A1X6P6L6 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P6L6_PORUM)

HSP 1 Score: 154 bits (388), Expect = 6.330e-43
Identity = 94/242 (38.84%), Postives = 123/242 (50.83%), Query Frame = 0
Query:    1 MVFFPSEFIPEYRPAKKHSVFSSNGWWLNRWPILGWLEAFIKVAAWIAVPHVRTHIPEQIPTLSP---------------------------------------------------SAAVQLAVMLVASILLLFAVIDRLVYREIISMIFVFPNNWAHWTVTLALYQCGREGINSKYFRIFCWLMFAGDVVKLVFFAFHDFSRIGVGLYVLVFLTALFAAMYGVILLLDYGYGSLWAIRAAK 191
            +++ P  FI E+R A+K S+ S+ GWW+NRWP LGW E  +K  AW   P+V    P   P  SP                                                   + A+Q  VML A+ L+L A+IDRLVYRE+IS +FV PN+WAH  V  ++ + GR G+++   R FCW M AGD++KLVFFA HDF  I V  YVL  L + FA  YGV+L L+YG     A  AA 
Sbjct:    2 VLYVPPHFIAEWREARKFSLLSTAGWWVNRWPALGWAETLLKAIAWTYAPYVALVPPP--PGASPVFLSAPVEXXXXXXXXXXXXXXXXXXXXXLPPSLRVAWSALAAAPAFTGDAAFALQTGVMLGAAALILAAIIDRLVYREVISALFVVPNSWAHVVVAASMVRGGRAGVDAAALRGFCWWMLAGDLIKLVFFAVHDFDIIAVAKYVLYMLVSFFAVAYGVVLALEYGVIDAAAASAAS 241          
BLAST of Ggra7728.t1 vs. uniprot
Match: A0A5J4YK48 (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YK48_PORPP)

HSP 1 Score: 150 bits (378), Expect = 1.230e-41
Identity = 82/190 (43.16%), Postives = 115/190 (60.53%), Query Frame = 0
Query:    2 VFFPSEFIPEYRPAKKHSVFSSNGWWLNRWPILGWLEAFIKVAAWIAVPHVRTHIPEQIPT-------LSPSAAVQLAVMLVASILLLFAVIDRLV-YREIISMIFVFPNNWAHWTVTLALYQCGREGINSKYFRIFCWLMFAGDVVKLVFFAFHDFSRIGVGLYVLVFLTALFAAMYGVILLLDYGYGS 183
            ++ P  FI E+R A+ + +  S GWW+N WP  GW+E F KVAAW+ V  +R+   +   T         P+   ++AVM VA   LL A++DRL+ YRE+ISM FVFPNN AHW+V   +   G E ++++++R F WLM  GDV KL+FF  HDF+   +  + L  L  L+A  Y VIL LDY  G+
Sbjct:   51 MYIPDHFIAEWRDARNYGILDSRGWWMNPWPFWGWVETFTKVAAWLFVLRIRSPGVKASHTSVLTWMQAGPAYKAEVAVMFVACFFLLLAILDRLLLYREVISMAFVFPNNLAHWSVLYTMLH-GPELLSTRHYRAFLWLMLLGDVSKLIFFKVHDFNIKALAKHALYLLVTLYAIAYAVILTLDYHTGA 239          
BLAST of Ggra7728.t1 vs. uniprot
Match: M2X536 (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X536_GALSU)

HSP 1 Score: 135 bits (339), Expect = 1.820e-36
Identity = 78/191 (40.84%), Postives = 117/191 (61.26%), Query Frame = 0
Query:    5 PSEFIPEYRPAKKHSVFSSNGWWLNRWPILGWLEAFIKVAAWIAVPHV--RTHIPEQIPTLSPSA--AVQLAVMLVASILLLFAVIDRLVYREIISMIFVFPNNWAHWTVTLALYQCGREGINSKYFRIFCWLMFAGDVVKLVFFAFHDFSRIGVGLYVLVFLTALFAAMYGVILLLDYGYGSLWAIRAAK 191
            PS+FI  Y  AKK+S+FSS GWWLNRWP LGWLE  +K+  ++   +V  RT +  +   +S      ++L    + ++L+   ++DR+ YRE++S+IF+  NNWAHWTV LALY+   +  +  YF  F   M  GD+VKL+FF  HDF+   V   VL +LT+LF   Y +I+ L+  + S+ ++   K
Sbjct:    4 PSQFIGYYPEAKKYSLFSSRGWWLNRWPFLGWLETVLKLYGFLCAYYVPERTSLAPKWENVSFLLWRRIELLTCGICTLLVTLGIVDRIFYREVVSIIFIVLNNWAHWTVFLALYKGHYDRKSLLYFLAF---MTLGDIVKLIFFKVHDFNIGSVAKAVLYYLTSLFVISYLLIIFLELYFNSVVSVGKHK 191          
BLAST of Ggra7728.t1 vs. uniprot
Match: A0A7S0G5E8 (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G5E8_9RHOD)

HSP 1 Score: 60.1 bits (144), Expect = 1.650e-8
Identity = 42/109 (38.53%), Postives = 58/109 (53.21%), Query Frame = 0
Query:   38 EAFIKVAAWIAVPHVRTHIPEQIPTLSPS-------AAVQLAVMLVASILLLFAVIDRLVYREIISMIFVFPNNWAHWTVTLALYQCGREGINSKYFRIFCWLMFAGDV 139
            E F+KVAAWI          E +     +       A V LAV++VA      A+ DR+VYREIISM+FVFP   +   V  AL + GR  +++  FR++ WL   GD+
Sbjct:    1 ETFLKVAAWIYAAKTPVAGSENMIPYGATLYKYEVWALVSLAVLMVA------AIGDRIVYREIISMLFVFPQMSSAVVVARALLK-GRRAVSAPNFRLYMWLQLLGDL 102          
The following BLAST results are available for this feature:
BLAST of Ggra7728.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IWM88.160e-10975.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6P6L66.330e-4338.84Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YK481.230e-4143.16Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
M2X5361.820e-3640.84Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
A0A7S0G5E81.650e-838.53Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..66
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 178..204
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 87..128
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 67..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 129..147
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 148..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 153..177
NoneNo IPR availableTMHMMTMhelixcoord: 126..148
NoneNo IPR availableTMHMMTMhelixcoord: 94..116
NoneNo IPR availableTMHMMTMhelixcoord: 155..177
NoneNo IPR availableTMHMMTMhelixcoord: 26..48
NoneNo IPR availableTMHMMTMhelixcoord: 63..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:170065..170748 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7728.t1Ggra7728.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 170065..170748 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7728.t1 ID=Ggra7728.t1|Name=Ggra7728.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=205bp
MVFFPSEFIPEYRPAKKHSVFSSNGWWLNRWPILGWLEAFIKVAAWIAVP
HVRTHIPEQIPTLSPSAAVQLAVMLVASILLLFAVIDRLVYREIISMIFV
FPNNWAHWTVTLALYQCGREGINSKYFRIFCWLMFAGDVVKLVFFAFHDF
SRIGVGLYVLVFLTALFAAMYGVILLLDYGYGSLWAIRAAKALALDTLFT
RLRR*
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