Ggra7679.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7679.t1
Unique NameGgra7679.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length193
Homology
BLAST of Ggra7679.t1 vs. uniprot
Match: A0A2V3IWT9 (Uncharacterized protein ycf20 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWT9_9FLOR)

HSP 1 Score: 216 bits (551), Expect = 1.310e-68
Identity = 117/192 (60.94%), Postives = 141/192 (73.44%), Query Frame = 0
Query:    1 MNSLPCCFITVFPHRVPLPVKLKSSTCQPPPLAIQGKGPSKDPKQQWRREDDLLSRLNAIPEDIIS-SNLSGLSEKPVPKLIETESQLTNIFNYLRRDLTPGIDNYLSNPLHLLSAAALAILFGFFSATAAATIIGSVADWDPLAAAVLLIWTESFTKYYYSTERTSRFLQIINAFKIGLIYGMTVDALKLT 191
            M + P  F +  P  + LP K +    + P + +Q     K P+  WRREDDLLSRLNAIPE + S S+ SG S+  + K  E E QL  I  YLR DL+ G+D YLSNP +L+++AALAILFGFFSAT+AATIIGSVADWDPLAAAVLLIWTESFTK+YY+  R SR LQ+INAFKIGLIYGMT+DALKL+
Sbjct:    8 MIASPVAFQSFLPCTLVLPKKNQPCISRRPLITLQASPSQKGPQPPWRREDDLLSRLNAIPEQLASPSDSSGRSQNKLRKSSEPEGQLIGIVKYLRSDLSFGVDRYLSNPFNLITSAALAILFGFFSATSAATIIGSVADWDPLAAAVLLIWTESFTKFYYTAHRPSRLLQLINAFKIGLIYGMTIDALKLS 199          
BLAST of Ggra7679.t1 vs. uniprot
Match: R7QB40 (Uncharacterized protein ycf20 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB40_CHOCR)

HSP 1 Score: 159 bits (403), Expect = 2.610e-46
Identity = 86/159 (54.09%), Postives = 114/159 (71.70%), Query Frame = 0
Query:   34 IQGKGPSKDPKQQWRREDDLLSRLNAIPEDIISSNLSGLSEKPVPKLIETESQLTNIFNYLRRDLTPGIDNYLSNPLHLLSAAALAILFGFFSATAAATIIGSVADWDPLAAAVLLIWTESFTKYYYSTERTSRFLQIINAFKIGLIYGMTVDALKLTT 192
            +Q K PS +   +   ++DLLSRLN++P+   ++   G S+     L+++  ++  ++ Y    L P I+  L NP +L+S A +AILFGFF+AT+AATIIGSVADWDPLAAAVLL+WTE FTKYYY  +  SR LQ+INAFKIGLIYGMTVDA KL+T
Sbjct:   41 MQVKDPSSE--DESLPDNDLLSRLNSVPD---ATRKPGRSQH----LVDSPGRIREVYTYFTEQLRPDIEGLLENPFNLISLAFIAILFGFFAATSAATIIGSVADWDPLAAAVLLVWTEGFTKYYYGLKDKSRLLQLINAFKIGLIYGMTVDAFKLST 190          
BLAST of Ggra7679.t1 vs. uniprot
Match: A0A7S1TEA8 (Uncharacterized protein ycf20 n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TEA8_9RHOD)

HSP 1 Score: 127 bits (319), Expect = 1.050e-33
Identity = 69/122 (56.56%), Postives = 88/122 (72.13%), Query Frame = 0
Query:   74 EKPVPKLIETESQ--LTNIFNYLRRDLTPGIDNYL-SNPLHLLSAAALAILFGFFSATAAATIIGSVADWDPLAAAVLLIWTESFTKYYYSTERTSRFLQIINAFKIGLIYGMTVDALKLTT 192
            + P P+  +  SQ  L  +  Y+R       + YL   P+  L+A ++AIL GFFSAT+AATIIGSVADWDPLAAAVL++WTE FT+ YYST + S FL+++NAFKIGL YGM VDALKL+T
Sbjct:   64 DPPGPRGYQDASQTALQRVARYVRTGALYEFEQYLRKRPIRQLTAGSIAILLGFFSATSAATIIGSVADWDPLAAAVLILWTEGFTRKYYSTSKPSSFLRLLNAFKIGLTYGMIVDALKLST 185          
BLAST of Ggra7679.t1 vs. uniprot
Match: A0A7S3ELZ1 (Uncharacterized protein ycf20 n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ELZ1_9RHOD)

HSP 1 Score: 117 bits (292), Expect = 5.030e-30
Identity = 70/141 (49.65%), Postives = 90/141 (63.83%), Query Frame = 0
Query:   53 LLSRLNAIPEDIISSNLSGLSEKPVPKLIETESQLTNIFNYLRRDLTPGIDNYLSN-PLHLLSAAALAILFGFFSATAAATIIGSVADWDPLAAAVLLIWTESFTKYYYSTERTSRFLQIINAFKIGLIYGMTVDALKLTT 192
            LL R     EDI   N   L++  V K     + L      L R +    + Y    P  LL+A A+A+L GFF AT+AATIIGSVADWDPLAAAVLL WTE+FT+ YY +E+ +  +++INAFKIGL+YGM V+A+KL T
Sbjct:   19 LLVRRLVAEEDIKELNQEELNQGSVYKPTRARAVLA-----LPRTIVKEAEFYFKERPRRLLTAGAIAVLMGFFGATSAATIIGSVADWDPLAAAVLLFWTETFTRVYYMSEKKTIPMKLINAFKIGLVYGMAVEAMKLGT 154          
BLAST of Ggra7679.t1 vs. uniprot
Match: A0A7S0BP02 (Uncharacterized protein ycf20 n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BP02_9RHOD)

HSP 1 Score: 112 bits (280), Expect = 7.150e-29
Identity = 55/84 (65.48%), Postives = 71/84 (84.52%), Query Frame = 0
Query:  109 PLHLLSAAALAILFGFFSATAAATIIGSVADWDPLAAAVLLIWTESFTKYYYSTERTSRFLQIINAFKIGLIYGMTVDALKLTT 192
            P  LL+A ++A+L GFF AT+AATIIGSVADWDPLAAAVLL WTE+FT+ YY++E  +  +++INAFKIGL+YGM V+A+KL T
Sbjct:   19 PRRLLTAGSIAVLMGFFGATSAATIIGSVADWDPLAAAVLLFWTETFTRIYYTSETKTIPMKLINAFKIGLVYGMAVEAMKLGT 102          
BLAST of Ggra7679.t1 vs. uniprot
Match: A0A1X6PD16 (Uncharacterized protein ycf20 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PD16_PORUM)

HSP 1 Score: 103 bits (257), Expect = 1.120e-25
Identity = 53/80 (66.25%), Postives = 66/80 (82.50%), Query Frame = 0
Query:  113 LSAAALAILFGFFSATAAATIIGSVADWDPLAAAVLLIWTESFTKYYYSTERTSRFLQIINAFKIGLIYGMTVDALKLTT 192
            ++AA LA+L GFFSAT+AATIIGSVADWDPLAAAVL+++TE  T+ YYS+   S  LQ+ NAFK+GL YG+ VDA KL+T
Sbjct:    1 MTAATLALLLGFFSATSAATIIGSVADWDPLAAAVLIVYTEGLTRAYYSSRAPSVGLQLANAFKVGLEYGLFVDAFKLST 80          
BLAST of Ggra7679.t1 vs. uniprot
Match: A9BL80 (Uncharacterized protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A9BL80_HEMAN)

HSP 1 Score: 103 bits (258), Expect = 5.110e-25
Identity = 55/101 (54.46%), Postives = 71/101 (70.30%), Query Frame = 0
Query:   91 FNYLRRDLTPGIDNYLSNPLHLLSAAALAILFGFFSATAAATIIGSVADWDPLAAAVLLIWTESFTKYYYSTERTSRFLQIINAFKIGLIYGMTVDALKLT 191
            F   +  LT     + +N +  LS     + FGFFSAT+A TIIGSVADWDPLAAAVLL W E FTK +YS+E+ + FL+++N+FKIG+I GM VDA K+T
Sbjct:   45 FTNRKNILTKNWQVFENNWIWELSLGIFFLFFGFFSATSAITIIGSVADWDPLAAAVLLCWIELFTKLFYSSEKLTNFLKLLNSFKIGIILGMFVDAFKIT 145          
BLAST of Ggra7679.t1 vs. uniprot
Match: A0A7S0YQT1 (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YQT1_9CRYP)

HSP 1 Score: 103 bits (257), Expect = 7.220e-25
Identity = 52/79 (65.82%), Postives = 63/79 (79.75%), Query Frame = 0
Query:  113 LSAAALAILFGFFSATAAATIIGSVADWDPLAAAVLLIWTESFTKYYYSTERTSRFLQIINAFKIGLIYGMTVDALKLT 191
            LS     + FGFFSAT+A TIIGSVADWDPLAAAVLL W E FTK +Y++E+ S FL+++N+FKIG+I GM VDA KLT
Sbjct:   67 LSIGIFFLFFGFFSATSAITIIGSVADWDPLAAAVLLCWIELFTKLFYNSEKMSHFLKLLNSFKIGIILGMFVDAFKLT 145          
BLAST of Ggra7679.t1 vs. uniprot
Match: A0A7S0MB56 (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MB56_9CRYP)

HSP 1 Score: 102 bits (254), Expect = 2.460e-24
Identity = 54/80 (67.50%), Postives = 64/80 (80.00%), Query Frame = 0
Query:  113 LSAAALAILFGFFSATAAATIIGSVADWDPLAAAVLLIWTESFTKYYYSTERTSRFLQIINAFKIGLIYGMTVDALKLTT 192
            LS     ILFGFFSAT+A TIIGSVADWDPLAAAV+L WTE FTK +Y +E  S  L++IN+FKIG+ +GM VDALKLT+
Sbjct:   74 LSLGIFFILFGFFSATSAITIIGSVADWDPLAAAVMLCWTEFFTKIFYYSENKSFNLKLINSFKIGINFGMFVDALKLTS 153          
BLAST of Ggra7679.t1 vs. uniprot
Match: A0A5J4YKU1 (Uncharacterized protein ycf20 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKU1_PORPP)

HSP 1 Score: 100 bits (250), Expect = 1.870e-23
Identity = 51/89 (57.30%), Postives = 69/89 (77.53%), Query Frame = 0
Query:  103 DNYLS-NPLHLLSAAALAILFGFFSATAAATIIGSVADWDPLAAAVLLIWTESFTKYYYSTERTSRFLQIINAFKIGLIYGMTVDALKL 190
            D YL+  P+  L++ A+A+L GFF++TAA+TIIGSVADWDPLAA VLL+W+E+ TK YY +   S  L ++N FK G+I+GM +DALKL
Sbjct:   88 DEYLTARPIRKLTSGAVALLLGFFASTAASTIIGSVADWDPLAAFVLLLWSETLTKAYYKSASPSNALTLLNTFKCGVIFGMCLDALKL 176          
The following BLAST results are available for this feature:
BLAST of Ggra7679.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IWT91.310e-6860.94Uncharacterized protein ycf20 n=1 Tax=Gracilariops... [more]
R7QB402.610e-4654.09Uncharacterized protein ycf20 n=1 Tax=Chondrus cri... [more]
A0A7S1TEA81.050e-3356.56Uncharacterized protein ycf20 n=1 Tax=Compsopogon ... [more]
A0A7S3ELZ15.030e-3049.65Uncharacterized protein ycf20 n=1 Tax=Rhodosorus m... [more]
A0A7S0BP027.150e-2965.48Uncharacterized protein ycf20 n=1 Tax=Rhodosorus m... [more]
A0A1X6PD161.120e-2566.25Uncharacterized protein ycf20 n=1 Tax=Porphyra umb... [more]
A9BL805.110e-2554.46Uncharacterized protein n=1 Tax=Hemiselmis anderse... [more]
A0A7S0YQT17.220e-2565.82Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A7S0MB562.460e-2467.50Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A5J4YKU11.870e-2357.30Uncharacterized protein ycf20 n=1 Tax=Porphyridium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007572Uncharacterised protein family Ycf20PFAMPF04483DUF565coord: 138..190
e-value: 2.0E-15
score: 56.9
IPR007572Uncharacterised protein family Ycf20PANTHERPTHR33787FAMILY NOT NAMEDcoord: 105..190
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 143..160
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..137
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 161..192
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..111
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 138..142
NoneNo IPR availableTMHMMTMhelixcoord: 144..161
NoneNo IPR availableTMHMMTMhelixcoord: 168..185
NoneNo IPR availableTMHMMTMhelixcoord: 112..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:46959..47537 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7679.t1Ggra7679.t1Gracilaria gracilis GNS1m malemRNAtig00000088_pilon 46959..47537 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7679.t1 ID=Ggra7679.t1|Name=Ggra7679.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=193bp
MNSLPCCFITVFPHRVPLPVKLKSSTCQPPPLAIQGKGPSKDPKQQWRRE
DDLLSRLNAIPEDIISSNLSGLSEKPVPKLIETESQLTNIFNYLRRDLTP
GIDNYLSNPLHLLSAAALAILFGFFSATAAATIIGSVADWDPLAAAVLLI
WTESFTKYYYSTERTSRFLQIINAFKIGLIYGMTVDALKLTT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007572Uncharacterised_Ycf20