Ggra7637.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7637.t1
Unique NameGgra7637.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length368
Homology
BLAST of Ggra7637.t1 vs. uniprot
Match: A0A2V3IT05 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IT05_9FLOR)

HSP 1 Score: 159 bits (403), Expect = 1.530e-41
Identity = 123/373 (32.98%), Postives = 194/373 (52.01%), Query Frame = 0
Query:    1 MVVVPLKSQFVSVIITIISTLSEAFIFGSFIRFNRHYETHRLQKGEQLRIRAHLNRTKLIAAISTIFFFTLELFVSFFTDPARIIKNKLHSCVSLDSVRRFEKPVFQFSDPRSETIKSQCSFVENGVYFQKGGNVT-EDDGKVLVQCSEEAIFSFNASELKTEKMFPTIKPIMGCSS-----CTSHGPGFGE---CLTFCAFAIAQ---NNSVFYSVSTSQEWALKMDANG---QAQQHLTYLGTIVHFSSRNLEKKMAERAAQAYADSITDPISQRRRILMGSEERICEFSVDRGEGTQVPIALIISISSVWLSSLILVLCSLLLLGRNMF-DVSDPLEWAFRSIRKDDAPIERDPAIRMEKETGEGSFLVS 357
            MV +PLKSQFVS+I+T+IS L+E F+FG+ + FN++ E   L+KG Q+ +R H  R K +A ++ + F  LE+ +SFF+DPA  IK +   C+++D +   E      +D   + I  +C  ++   + Q+ GN +   + K  V+C + A++ +  +E   +     +    G  +     C    P  GE       CA A+ Q   N+  F +V  S   A++    G     Q  + +L T V +++  L +  A R  +AY   +TDP+  R+R+ MG E R C F   + + T VP+ L+  I + W+ S  L   S LLL R++F D+SDPL WA R+ R  D PI  +P +    E GE    VS
Sbjct:    1 MVEIPLKSQFVSLIVTLISGLAELFLFGALLGFNKYSECIALRKGRQVSVRLHRIRAKFLAVLAMVVFIFLEVIMSFFSDPAIEIKFRTDECLAVDRIDLREGFTGDTND--EDFILIRCIGIKKDGFLQRAGNFSLNPNTKARVRCGKHALYEY-PNEDDLQFTLTNVTRTGGTDTDLVLECILPTPAVGEKPPTERLCA-AVRQLPPNSIGFTNVYLSA--AVRESEVGPLVNQQVVIPFLETSVRYNTSGLSRNFARRLLRAYDKDVTDPMEIRKRVFMGIERRKCAFEHRKKDLTTVPLGLVYGIVAAWILSF-LTFASTLLLRRSIFYDMSDPLHWAQRTYRHIDEPIVGNPVVTSVYEHGERLMYVS 366          
BLAST of Ggra7637.t1 vs. uniprot
Match: A0A2V3J5A0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5A0_9FLOR)

HSP 1 Score: 156 bits (395), Expect = 9.550e-41
Identity = 115/376 (30.59%), Postives = 189/376 (50.27%), Query Frame = 0
Query:    1 MVVVPLKSQFVSVIITIISTLSEAFIFGSFIRFNRHYETHRLQKGEQLRIRAHLNRTKLIAAISTIFFFTLELFVSFFTDPARIIKNKLHSCVSLDSVRRFEKPVFQFSDPRSET----IKSQCSFVENGVYFQKGGNVTEDDGKVLVQCSEEAIFSFN-----------ASELKTEKMFPTIKPIMGCSSCTSHGPGFGECLTFCAFAIAQNNSV--FYSVSTSQEWALKMDANGQAQQHLTYLGTIVHFSSRNLE--KKMAERAAQAYADSITDPISQRRRILMGSEERICEFSVDRGEGTQVPIALIISISSVWLSSLILVLCSLLLLGRNMFDVSDPLEWAFRSIRKDDAPIERDPAIRMEKETGEGSFLVS 357
            MV++PLKSQ+VS+I TIIS L+E  +  + +R N + E H LQKG  + +  H NR   +  ++T  FF +EL +SF++DPA  +  +   CV+++++ R      +  DP +      I   C        F + GN + +  KV  +C+E A   F            A+ + +E  FP   P++ C+       GF   +   ++  + +++   F  V  + E ++    N      + +L T +  +  N E   K AER  QAY +++ DP   RR + +GSE   C+F     E T+VP  +I+S+S+VW+ SL     +LLL  R  +D+S+P+ WA R+ R+ D P+  DP++    E G     VS
Sbjct:    1 MVLIPLKSQYVSLINTIISLLTELSLLKALLRVNNYCECHALQKGHHVSVTRHQNRATCLVLVTTAAFFAIELLLSFYSDPAVKLTFQSQPCVAVETLTR------RSGDPGTSLEEIGIVLSCVKTNESNIFLRVGNYSMETRKV--ECAESATLMFTLEPHVSLPIGTAAAVSSENPFPD--PLLKCAD------GFCVVIQTASYQSSSSDTTVWFSDVFFADEVSMLQIDNSP----IKFLNTTIFSAQNNTELLPKFAERLLQAYDENLNDPFELRRLMFLGSERDTCQFQ-RTSEATEVPPFIIVSVSTVWVISLAAYAMTLLLSRRVFYDISNPVHWAKRTYRRTDEPVHGDPSVSRVLENGHHVMYVS 355          
BLAST of Ggra7637.t1 vs. uniprot
Match: A0A2V3J6F3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6F3_9FLOR)

HSP 1 Score: 146 bits (369), Expect = 3.090e-37
Identity = 103/344 (29.94%), Postives = 174/344 (50.58%), Query Frame = 0
Query:    1 MVVVPLKSQFVSVIITIISTLSEAFIFGSFIRFNRHYETHRLQKGEQLRIRAHLNRTKLIAAISTIFFFTLELFVSFFTDPARIIKNKLHSCVSLDSVRRFEKPVFQFSDPRSETIKSQCSFVENGVYFQKGGNVTEDDGKVLVQCSEEAIFSFNASELKTEKMFPTIKPIMGCSSCTSHGPGFGECLTFCAFAIAQNNSVFYSVSTSQEWALKMDANGQAQQHLTYLGTIVHFSSRNLEKKMAERAAQAYADSITDPISQRRRILMGSEERICEFSVDRGEGTQVPIALIISISSVWLSSLILVLCSLLLLGRNMF-DVSDPLEWAFRSIRKDDAPIERDPAI 343
            MV++ LK+ FVSVI+T++STL+E  +       N  +E  +LQ+G  +++R HL RT+L++ +    FF LE+  SF+ DP   ++ ++H C++  +  +      QF   R+  I  +C  ++NG   Q GGN +    +V  +CS EA+++    +  +E++   +    GC S    G         C F   + N    S          +D        L ++ T +HF+  +     A RA  A+  +I  P + RR I  G+ E  C F V RG  T VP+A+I+++++VW  +L +   S+  L R +F  + DP+ WA RS+R  D P+  +P +
Sbjct:    1 MVLIRLKAPFVSVIVTVLSTLAELALLSFLFVLNNLHECKQLQRGRSVQVRQHLRRTRLLSVVCLGAFFALEVVFSFYNDPVNNVQIEIHECITASNSVKDSGDSTQFL--RASDILVECRRLDNGTITQFGGNFSSRTQQV--ECSTEAMYTHPLGDETSEEIVADVP--FGCVSGGEEGAA-------CVFVQQRGNLSLISAP------FFLDELSILPDTLPHIITELHFTPPSNVSLFATRATNAFLQNIQGPSALRRIIYSGASEDQCAFPVVRGSATTVPLAMIVALAAVWAVALAM-FASVFALRRGVFFKLDDPMHWATRSVRAADDPLGDNPVL 324          
BLAST of Ggra7637.t1 vs. uniprot
Match: A0A2V3ISI7 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISI7_9FLOR)

HSP 1 Score: 133 bits (334), Expect = 5.880e-32
Identity = 101/358 (28.21%), Postives = 176/358 (49.16%), Query Frame = 0
Query:    1 MVVVPLKSQFVSVIITIISTLSEAFIFGSFIRFNRHYETHRLQKGEQLRIRAHLNRTKLIAAISTIFFFTLELFVSFFTDPARIIKNKLHSCVSLDSVRRFEKPVFQFSDPRSETIKSQCSFVENGVYFQKGGNVTEDDGKVLVQCSEEAIFSFNASELKTEKMFPTIKPIMGCSSCTSHGPGFGECLTFCAFAIAQNNSV-FYSVSTSQEWALKMDANGQAQQHLTYLGTIVHFSSRNLEKKMAERAAQAYADSITDPISQRRRILMGSEERICEFSVDRGEGTQVPIALIISISSVWLSSLILVLCSLLLLGRNMFDVSDPLEWAFRSIRKDDAPIERDPAIRMEKETGEGSFLVS 357
            MV++PLKSQ+ S+I TI+S L+E  +  + + +N++ E   L+ G ++ +R H  RT+ +   +T+ F  LE+  SFF+DPA        SC+SLD++    + +   S  R+  +   C      + +Q  GN++ DDG++  +C ++ +FS +      E +     P      C   G      L  CAF  +  + V F  +    + +  +D N      L    T V++++  +E+++  R+     D +TD    RR +  G+EE  C F V     T +    + +I+  W  SL   L SL + GR  +D+SDPL+WA +++R +D+    +P +    E G    LV+
Sbjct:    1 MVLIPLKSQYTSLIATILSGLAELALLSAVLGYNKYLECRALENGGRVNVRHHRFRTRALTVAATLAFVFLEVSNSFFSDPALKRGEVTKSCISLDALP-IRRGMLDIS-LRAAVVGINCLGTNTSLLWQLAGNIS-DDGEI--KCGDDFLFSADIHHSPNEPV-----PDEHTMECILDGE-----LNLCAFLYSNGSEVTFTEIVLDTDLSFVLDNN----YALRVWKTTVYYNTTGMERELLRRSITLARDLVTDQFVLRREVFAGAEETECNFDVF-SPATTIKEGFLYAIAVAWTLSLAAFLGSLAIRGRVFYDMSDPLDWARQTVRDEDSSDIDNPVVTTRYENGTRFVLVT 338          
BLAST of Ggra7637.t1 vs. uniprot
Match: A0A2V3J5C2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5C2_9FLOR)

HSP 1 Score: 116 bits (291), Expect = 8.150e-26
Identity = 94/369 (25.47%), Postives = 171/369 (46.34%), Query Frame = 0
Query:    1 MVVVPLKSQFVSVIITIISTLSEAFIFGSFIRFNRHYETHRLQKGEQLRIRAHLNRTKLIAAISTIFFFTLELFVSFFTDPARIIKNKLHSCVSLDSVRRFEKPVFQFSDPRSETIKSQCSFVENGVYFQKGGNVTED----------DGKVLVQCSEEAIFSFNASELKTEKMFPTIKPIMGCSSCTSHGPGFGECLTFCAFAIAQNNSVFYSVSTSQEWALKMDANGQAQQHLTY--LGTIVHFSSRNLEKKMAERAAQAYADSITDPISQRRRILMGSEERICEFSVDRGEGTQVPIALIISISSVWLSSLILVLCSLLLLGRNMFDVSDPLEWAFRSIRKDDAPIERDPAIRMEKETGEGSFLVS 357
            MV++PLKSQ+ S+I+T+IS ++E  +  + + FN++ E   LQ G ++ +R H  RTK +   +T+ F  LE+F SF++DP    +    +C SLD++   ++ +   S  ++  +  +C  + + +++Q  GN+++           D +V     +E +++ N      E +    + ++GC              T C F     N V ++     E     D +    + +T     T + ++   LE   A RA    +  +TD  + RR +  GS    C F     + T+V    I +I   W  S+   + S  +  R  +D+SDPL WA ++IR +D     +P +    E G  + LV+
Sbjct:    1 MVLIPLKSQYTSLIVTVISGIAELALLSAVLVFNKYLECRALQNGGKVNVRHHRFRTKALTVAATLAFVFLEVFSSFYSDPDDKTELVRKNCTSLDALT-VQQGLLNIST-QTTVVGVKCIGINSTLFWQHAGNISDGRNIGNGGNIGDDEVFECEKKEVLYTANVERAPDEPV--PDEYVVGCVG------------TSCVFVYRSGNEVTFTDFVHSE-----DVSRVLNESITLPVWKTTISYNVTGLESAFATRAVDLLSQGVTDGFTLRRGVFAGSAITQCNFKTF-SDATRVRKGFIYAIVIAWALSISAFVGSFAIRRRIFYDMSDPLHWAQKTIRDNDLSDTDNPVVTTVYENGSRALLVT 347          
The following BLAST results are available for this feature:
BLAST of Ggra7637.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IT051.530e-4132.98Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5A09.550e-4130.59Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J6F33.090e-3729.94Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3ISI75.880e-3228.21Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J5C28.150e-2625.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 34..58
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 313..367
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 288..312
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..78
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 79..287
NoneNo IPR availableTMHMMTMhelixcoord: 59..78
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 290..312

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000866_piloncontigtig00000866_pilon:734753..735856 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7637.t1Ggra7637.t1Gracilaria gracilis GNS1m malemRNAtig00000866_pilon 734753..735856 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7637.t1 ID=Ggra7637.t1|Name=Ggra7637.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=368bp
MVVVPLKSQFVSVIITIISTLSEAFIFGSFIRFNRHYETHRLQKGEQLRI
RAHLNRTKLIAAISTIFFFTLELFVSFFTDPARIIKNKLHSCVSLDSVRR
FEKPVFQFSDPRSETIKSQCSFVENGVYFQKGGNVTEDDGKVLVQCSEEA
IFSFNASELKTEKMFPTIKPIMGCSSCTSHGPGFGECLTFCAFAIAQNNS
VFYSVSTSQEWALKMDANGQAQQHLTYLGTIVHFSSRNLEKKMAERAAQA
YADSITDPISQRRRILMGSEERICEFSVDRGEGTQVPIALIISISSVWLS
SLILVLCSLLLLGRNMFDVSDPLEWAFRSIRKDDAPIERDPAIRMEKETG
EGSFLVSETVQSRHHLS*
back to top