Ggra7637.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7637.t1
Unique NameGgra7637.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length368
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000866_piloncontigtig00000866_pilon:734753..735856 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7637Ggra7637Gracilaria gracilis GNS1m malegenetig00000866_pilon 734753..735856 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7637.t1.start1Ggra7637.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000866_pilon 734753..734755 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7637.t1.CDS1Ggra7637.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000866_pilon 734753..735856 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7637.t1.exon1Ggra7637.t1.exon1Gracilaria gracilis GNS1m maleexontig00000866_pilon 734753..735856 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7637.t1.stop1Ggra7637.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000866_pilon 735854..735856 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7637.t1Ggra7637.t1Gracilaria gracilis GNS1m malepolypeptidetig00000866_pilon 734753..735856 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7637.t1 ID=Ggra7637.t1|Name=Ggra7637.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=368bp
MVVVPLKSQFVSVIITIISTLSEAFIFGSFIRFNRHYETHRLQKGEQLRI
RAHLNRTKLIAAISTIFFFTLELFVSFFTDPARIIKNKLHSCVSLDSVRR
FEKPVFQFSDPRSETIKSQCSFVENGVYFQKGGNVTEDDGKVLVQCSEEA
IFSFNASELKTEKMFPTIKPIMGCSSCTSHGPGFGECLTFCAFAIAQNNS
VFYSVSTSQEWALKMDANGQAQQHLTYLGTIVHFSSRNLEKKMAERAAQA
YADSITDPISQRRRILMGSEERICEFSVDRGEGTQVPIALIISISSVWLS
SLILVLCSLLLLGRNMFDVSDPLEWAFRSIRKDDAPIERDPAIRMEKETG
EGSFLVSETVQSRHHLS*
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spliced messenger RNA

>Ggra7637.t1 ID=Ggra7637.t1|Name=Ggra7637.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1104bp|location=Sequence derived from alignment at tig00000866_pilon:734753..735856+ (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGGTTGTCGTCCCGCTCAAATCGCAATTCGTAAGTGTGATCATAACAAT
AATTTCCACCTTATCTGAAGCATTCATCTTTGGATCTTTCATCAGGTTCA
ACCGCCATTACGAGACCCATCGTTTACAGAAAGGAGAACAACTTCGAATT
CGGGCGCATTTGAATCGAACAAAGCTAATAGCGGCCATTTCAACCATATT
CTTCTTCACGCTTGAACTGTTTGTCTCGTTCTTCACTGATCCAGCCAGAA
TCATCAAGAACAAACTCCATTCTTGCGTTTCACTGGATTCAGTTAGAAGA
TTTGAGAAACCCGTGTTCCAATTCAGTGATCCCAGGAGCGAAACTATAAA
GAGTCAGTGTTCGTTCGTAGAAAATGGCGTGTACTTTCAGAAGGGAGGCA
ATGTAACGGAAGATGACGGCAAAGTTCTCGTACAATGCTCCGAAGAAGCT
ATATTCTCTTTCAATGCCTCTGAATTAAAAACCGAGAAGATGTTTCCGAC
AATCAAGCCCATCATGGGCTGTTCTTCGTGCACGAGTCATGGGCCAGGAT
TCGGAGAATGTCTAACGTTCTGTGCTTTTGCAATTGCCCAAAACAATTCT
GTGTTCTACTCGGTGTCAACATCACAAGAATGGGCATTGAAGATGGATGC
CAACGGGCAGGCACAGCAGCATTTAACATATCTCGGGACAATCGTGCACT
TCAGCTCTAGAAATCTGGAGAAGAAAATGGCGGAAAGAGCGGCACAAGCG
TATGCAGACAGTATTACGGATCCTATCTCGCAAAGGCGTCGAATCCTGAT
GGGATCAGAAGAAAGAATTTGTGAGTTCTCTGTTGACAGAGGGGAGGGCA
CACAGGTGCCAATTGCTCTCATAATCTCTATTTCGAGTGTTTGGTTGAGC
TCTTTAATTCTGGTTTTATGTTCGTTGTTGCTTCTGGGTCGAAATATGTT
CGATGTGAGTGATCCGTTGGAGTGGGCTTTTCGCAGCATTCGAAAGGATG
ATGCTCCAATCGAGAGGGATCCAGCGATTAGAATGGAAAAGGAGACGGGG
GAGGGTTCTTTTTTGGTATCCGAAACTGTGCAAAGCCGGCACCACTTGAG
CTGA
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protein sequence of Ggra7637.t1

>Ggra7637.t1 ID=Ggra7637.t1|Name=Ggra7637.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=368bp
MVVVPLKSQFVSVIITIISTLSEAFIFGSFIRFNRHYETHRLQKGEQLRI
RAHLNRTKLIAAISTIFFFTLELFVSFFTDPARIIKNKLHSCVSLDSVRR
FEKPVFQFSDPRSETIKSQCSFVENGVYFQKGGNVTEDDGKVLVQCSEEA
IFSFNASELKTEKMFPTIKPIMGCSSCTSHGPGFGECLTFCAFAIAQNNS
VFYSVSTSQEWALKMDANGQAQQHLTYLGTIVHFSSRNLEKKMAERAAQA
YADSITDPISQRRRILMGSEERICEFSVDRGEGTQVPIALIISISSVWLS
SLILVLCSLLLLGRNMFDVSDPLEWAFRSIRKDDAPIERDPAIRMEKETG
EGSFLVSETVQSRHHLS*
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mRNA from alignment at tig00000866_pilon:734753..735856+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7637.t1 ID=Ggra7637.t1|Name=Ggra7637.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=1104bp|location=Sequence derived from alignment at tig00000866_pilon:734753..735856+ (Gracilaria gracilis GNS1m male)
ATGGTTGTCGTCCCGCTCAAATCGCAATTCGTAAGTGTGATCATAACAAT
AATTTCCACCTTATCTGAAGCATTCATCTTTGGATCTTTCATCAGGTTCA
ACCGCCATTACGAGACCCATCGTTTACAGAAAGGAGAACAACTTCGAATT
CGGGCGCATTTGAATCGAACAAAGCTAATAGCGGCCATTTCAACCATATT
CTTCTTCACGCTTGAACTGTTTGTCTCGTTCTTCACTGATCCAGCCAGAA
TCATCAAGAACAAACTCCATTCTTGCGTTTCACTGGATTCAGTTAGAAGA
TTTGAGAAACCCGTGTTCCAATTCAGTGATCCCAGGAGCGAAACTATAAA
GAGTCAGTGTTCGTTCGTAGAAAATGGCGTGTACTTTCAGAAGGGAGGCA
ATGTAACGGAAGATGACGGCAAAGTTCTCGTACAATGCTCCGAAGAAGCT
ATATTCTCTTTCAATGCCTCTGAATTAAAAACCGAGAAGATGTTTCCGAC
AATCAAGCCCATCATGGGCTGTTCTTCGTGCACGAGTCATGGGCCAGGAT
TCGGAGAATGTCTAACGTTCTGTGCTTTTGCAATTGCCCAAAACAATTCT
GTGTTCTACTCGGTGTCAACATCACAAGAATGGGCATTGAAGATGGATGC
CAACGGGCAGGCACAGCAGCATTTAACATATCTCGGGACAATCGTGCACT
TCAGCTCTAGAAATCTGGAGAAGAAAATGGCGGAAAGAGCGGCACAAGCG
TATGCAGACAGTATTACGGATCCTATCTCGCAAAGGCGTCGAATCCTGAT
GGGATCAGAAGAAAGAATTTGTGAGTTCTCTGTTGACAGAGGGGAGGGCA
CACAGGTGCCAATTGCTCTCATAATCTCTATTTCGAGTGTTTGGTTGAGC
TCTTTAATTCTGGTTTTATGTTCGTTGTTGCTTCTGGGTCGAAATATGTT
CGATGTGAGTGATCCGTTGGAGTGGGCTTTTCGCAGCATTCGAAAGGATG
ATGCTCCAATCGAGAGGGATCCAGCGATTAGAATGGAAAAGGAGACGGGG
GAGGGTTCTTTTTTGGTATCCGAAACTGTGCAAAGCCGGCACCACTTGAG
CTGA
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Coding sequence (CDS) from alignment at tig00000866_pilon:734753..735856+

>Ggra7637.t1 ID=Ggra7637.t1|Name=Ggra7637.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=1104bp|location=Sequence derived from alignment at tig00000866_pilon:734753..735856+ (Gracilaria gracilis GNS1m male)
ATGGTTGTCGTCCCGCTCAAATCGCAATTCGTAAGTGTGATCATAACAAT
AATTTCCACCTTATCTGAAGCATTCATCTTTGGATCTTTCATCAGGTTCA
ACCGCCATTACGAGACCCATCGTTTACAGAAAGGAGAACAACTTCGAATT
CGGGCGCATTTGAATCGAACAAAGCTAATAGCGGCCATTTCAACCATATT
CTTCTTCACGCTTGAACTGTTTGTCTCGTTCTTCACTGATCCAGCCAGAA
TCATCAAGAACAAACTCCATTCTTGCGTTTCACTGGATTCAGTTAGAAGA
TTTGAGAAACCCGTGTTCCAATTCAGTGATCCCAGGAGCGAAACTATAAA
GAGTCAGTGTTCGTTCGTAGAAAATGGCGTGTACTTTCAGAAGGGAGGCA
ATGTAACGGAAGATGACGGCAAAGTTCTCGTACAATGCTCCGAAGAAGCT
ATATTCTCTTTCAATGCCTCTGAATTAAAAACCGAGAAGATGTTTCCGAC
AATCAAGCCCATCATGGGCTGTTCTTCGTGCACGAGTCATGGGCCAGGAT
TCGGAGAATGTCTAACGTTCTGTGCTTTTGCAATTGCCCAAAACAATTCT
GTGTTCTACTCGGTGTCAACATCACAAGAATGGGCATTGAAGATGGATGC
CAACGGGCAGGCACAGCAGCATTTAACATATCTCGGGACAATCGTGCACT
TCAGCTCTAGAAATCTGGAGAAGAAAATGGCGGAAAGAGCGGCACAAGCG
TATGCAGACAGTATTACGGATCCTATCTCGCAAAGGCGTCGAATCCTGAT
GGGATCAGAAGAAAGAATTTGTGAGTTCTCTGTTGACAGAGGGGAGGGCA
CACAGGTGCCAATTGCTCTCATAATCTCTATTTCGAGTGTTTGGTTGAGC
TCTTTAATTCTGGTTTTATGTTCGTTGTTGCTTCTGGGTCGAAATATGTT
CGATGTGAGTGATCCGTTGGAGTGGGCTTTTCGCAGCATTCGAAAGGATG
ATGCTCCAATCGAGAGGGATCCAGCGATTAGAATGGAAAAGGAGACGGGG
GAGGGTTCTTTTTTGGTATCCGAAACTGTGCAAAGCCGGCACCACTTGAG
CTGA
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