Ggra7587.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Ggra7587.t1
Unique Name	Ggra7587.t1
Type	polypeptide
Organism	Gracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length	441

Homology

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BLAST of Ggra7587.t1 vs. uniprot
Match: A0A2V3IWN9 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWN9_9FLOR)

HSP 1 Score: 383 bits (983), Expect = 4.430e-128
Identity = 176/348 (50.57%), Postives = 255/348 (73.28%), Query Frame = 0

Query:   90 LCGEEDESPDPKRPTWGICVAFILSQWHKLLLYFSKSHIWPEKMAQTPGSCYSRHIWIGVQPTPAETNDLGITVSHFRKLSWFGRDCEQQKPCLSGMGPLPESLQRSALGNIASAAYNFLEIEFAPQESVNILVYDRSDTIRRQWNGASEVFDKLRSDKRVNVQLLHRMPISFARQVKLFTWANIVVAPHGGAMANTIFMQTGSDILEVRRNCEADKRFPNFMPWDWTGWHAHLLGLNLMYIRCTMQKEKTKRTSSLKDEEPSQFTVNVTEVLRVLEGCIRRQIHRRNAAHRNQLLN-KKLPGEEDEEIFDLVHREFQRITIVEFSVLVSIAAMVIIGSRFFSRRSHR 436
            +CGE+ +   P+RP WGIC+AFIL+QWH   L+F K+ IWP ++   PG+C+S+ IW+G+ P  A + D G+ VSHFRKLSWFGR+CE Q PC+SG+  LP+S Q SAL NI SA  ++ E+++A  + +N+L+YDR+DT RR+W GA EVF+KL SDKR++V+LLH+MP+SF +QVKLF WA+I ++PHG A+ANTIFMQ+ SD+LE+ +NC+AD +   F PWDWTGWHAHLLGLNL+Y+ CT  ++ +  TS    +  S+FTVNV++VL V+E C++RQ+HRR A    Q+      P  +   + + V +E +R+++ EF +L+ ++A+V++G+R  S R  R
Sbjct:    1 MCGEDADYASPQRPPWGICLAFILAQWHSAQLHFEKTRIWPHQVT-APGACHSKQIWMGILPASALSRDTGVRVSHFRKLSWFGRNCEVQYPCVSGLAHLPDSWQTSALSNIVSAVLDYTEVKYARSDVINVLIYDRNDTRRRKWMGAQEVFEKLGSDKRLHVKLLHQMPMSFFKQVKLFAWADIFLSPHGAAIANTIFMQSESDVLEIMKNCDADSKQARFAPWDWTGWHAHLLGLNLVYLECTTLQQASAVTS----DGVSRFTVNVSDVLTVVEHCVQRQLHRRKAKSVGQIAGIAPNPSSKGSNLIE-VQQELRRLSVEEFLMLLMLSAVVVLGTRTASARKRR 342

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BLAST of Ggra7587.t1 vs. uniprot
Match: A0A1X6P8T0 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P8T0_PORUM)

HSP 1 Score: 83.6 bits (205), Expect = 1.930e-13
Identity = 45/117 (38.46%), Postives = 66/117 (56.41%), Query Frame = 0

Query:  219 VNILVYDRSDTIRRQWNGASEVFDKLRSDKRVNVQLLHRM-PISFARQVKLFTWANIVVAPHGGAMANTIFMQTGSDILEVRRNC-EADKRFPNFMPWDWTGWHAHLLGLNLMYIRC 333
            V +L+Y R D   RQW     +   LR+++ V V ++HR+ P SFA Q   F  A+++VAPHG A AN +F+     ++EV R C +A        P  W+G  A  LGL+L+Y+ C
Sbjct:  647 VRVLLYTRGDMTSRQWLSTGSLVAALRAERAVTVDVVHRLVPSSFAAQAATFAAADVLVAPHGAAAANALFLPPDGAVVEVWRCCWDAGVARRPTAPRPWSGALAAALGLDLIYVPC 763

The following BLAST results are available for this feature:

BLAST of Ggra7587.t1 vs. uniprot

BLAST of Ggra7587.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IWN9	4.430e-128	50.57	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A1X6P8T0	1.930e-13	38.46	Uncharacterized protein n=1 Tax=Porphyra umbilical...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007657	Glycosyltransferase 61	PFAM	PF04577	Glyco_transf_61	coord: 208..296 e-value: 2.5E-12 score: 47.1
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..12
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..17
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 431..440
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 13..17
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 410..430
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 18..409
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	TMHMM	TMhelix		coord: 408..430

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000866_pilon	contig	tig00000866_pilon:243554..244876 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria gracilis GNS1m male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Ggra7587.t1	Ggra7587.t1	Gracilaria gracilis GNS1m male	mRNA	tig00000866_pilon 243554..244876 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Ggra7587.t1 ID=Ggra7587.t1|Name=Ggra7587.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=441bp
MLVQSLVLFVTVAGSLAFDFCHTDPRLQVLQNDPSSTASCPSAIYVPELG
RNPNHALHDRLWAVSHYLKHCADNEASLILNDHVFYNLSLCGEEDESPDP
KRPTWGICVAFILSQWHKLLLYFSKSHIWPEKMAQTPGSCYSRHIWIGVQ
PTPAETNDLGITVSHFRKLSWFGRDCEQQKPCLSGMGPLPESLQRSALGN
IASAAYNFLEIEFAPQESVNILVYDRSDTIRRQWNGASEVFDKLRSDKRV
NVQLLHRMPISFARQVKLFTWANIVVAPHGGAMANTIFMQTGSDILEVRR
NCEADKRFPNFMPWDWTGWHAHLLGLNLMYIRCTMQKEKTKRTSSLKDEE
PSQFTVNVTEVLRVLEGCIRRQIHRRNAAHRNQLLNKKLPGEEDEEIFDL
VHREFQRITIVEFSVLVSIAAMVIIGSRFFSRRSHRMRRT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007657	Glycosyltransferase_61