Ggra7585.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7585.t1
Unique NameGgra7585.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length217
Homology
BLAST of Ggra7585.t1 vs. uniprot
Match: A0A2V3IL68 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IL68_9FLOR)

HSP 1 Score: 256 bits (653), Expect = 1.830e-83
Identity = 135/225 (60.00%), Postives = 160/225 (71.11%), Query Frame = 0
Query:    1 MKLTLALGLCISVSGAFAAGIGAVGRNAA--YQVTATPAPYVT------PVPEYKATQPSASTPTPPPGGYTAPETGPEYVPSPAPYTGGE-APSMDNMCWMETKRCCYKEEADGYECRDYYADKYARCYAKFKYVRKCDKAEKHGKPEKPEGRVERTKCEKVYYDKGYGPHVKGYPASGESKWYDSKELPMKPYGVEGEPKYNAPRYEPEPVPAGASYVPPVGY 216
            MK   ALGL + +S A  A IG +GR     Y+ +  P P+ T      P  +Y ATQPS +TPTPPP GYTAPET        AP T  +     DNMCWMETK+CCY E+ADGYEC+DYYA KYARCYAKFKYVR+CDKAE HGKPEKP+ RVE++KC+KV+YD+ YGPHV+GYP   ES+WYDS+ELP KPYGV+GEP+Y APRYE EPV A + Y  P  Y
Sbjct:    1 MKFIFALGLYVCLSEAVGASIG-MGRETTIRYRPSVAPTPHYTATTTAPPTAQYAATQPSYATPTPPPEGYTAPETS-------APTTDEKYTTETDNMCWMETKKCCYIEKADGYECKDYYAHKYARCYAKFKYVRRCDKAESHGKPEKPKPRVEKSKCQKVHYDQNYGPHVEGYPTDAESEWYDSEELPKKPYGVKGEPQYPAPRYEAEPVYANSGYETPPRY 217          
BLAST of Ggra7585.t1 vs. uniprot
Match: A0A2V3IVJ2 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVJ2_9FLOR)

HSP 1 Score: 210 bits (535), Expect = 6.650e-66
Identity = 105/185 (56.76%), Postives = 130/185 (70.27%), Query Frame = 0
Query:   30 YQVTATPAPYVTPVPEYKATQPSASTPTPPPGGYTAPETGPEYVPSPAPYTGGEAPSMD----NMCWMETKRCCYKEEADGYECRDYYADKYARCYAKFKYVRKCDKAEKHGKPEKPEGRVERTKCEKVYYDKGYGPHVKGYPASGESKWYDSKELPMKPYGVEGEPKYNAPRYEPEPVPAGASY 210
            YQ +A PAPY TP     +T+   STP P    Y+AP++G +Y  +  P T  +   MD    NMCWMETK+CCY EEADGY+C+DYYA KY+RCYAKFK VRKCD+AE+HGKPE+P+ RV R +C K YYDK YGPHV+GYP+ GES WYD+K+LP KPYGV+ EP+Y  P   PE     + Y
Sbjct:    9 YQPSAAPAPYQTPTNNPSSTEYDKSTPLP--DNYSAPKSGKDYASTQNPPT--DEIHMDENTNNMCWMETKKCCYLEEADGYKCKDYYAHKYSRCYAKFKTVRKCDRAEEHGKPERPKPRVNRKECTKQYYDKNYGPHVEGYPSGGESVWYDAKDLPKKPYGVQSEPQYQIPSQIPEEFSKNSGY 189          
BLAST of Ggra7585.t1 vs. uniprot
Match: A0A2V3IYA0 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYA0_9FLOR)

HSP 1 Score: 102 bits (254), Expect = 3.240e-22
Identity = 54/119 (45.38%), Postives = 71/119 (59.66%), Query Frame = 0
Query:   81 GGEAPSMDNMCWMETKRCCYKEEADGYECRDYYADKYARCYAKFKYVRKC-DKAEKHGKPEKPEGRVERTKCEKVYYDKGYGPHVKGYPASGESKWYDSKELPMKPYGVEGEPKYNAPR 198
            G  AP M   CW  +K CCY+E   GYEC+DYYA KYARC+   ++   C D  E   +  +P+GRV+  +     YD  YGPHV GYP  GES++Y +  +P KP+GV  E  Y AP+
Sbjct:  148 GRHAPKM---CWTVSKHCCYEEVQKGYECKDYYAYKYARCHPVIEFDEVCGDIKETPAEHPRPKGRVKYEESVLKNYDANYGPHVAGYPKDGESEYYRTDTIPSKPHGVT-ENAYPAPQ 262          
The following BLAST results are available for this feature:
BLAST of Ggra7585.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IL681.830e-8360.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IVJ26.650e-6656.76Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IYA03.240e-2245.38Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..69
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000866_piloncontigtig00000866_pilon:125816..126466 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7585.t1Ggra7585.t1Gracilaria gracilis GNS1m malemRNAtig00000866_pilon 125816..126466 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7585.t1 ID=Ggra7585.t1|Name=Ggra7585.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=217bp
MKLTLALGLCISVSGAFAAGIGAVGRNAAYQVTATPAPYVTPVPEYKATQ
PSASTPTPPPGGYTAPETGPEYVPSPAPYTGGEAPSMDNMCWMETKRCCY
KEEADGYECRDYYADKYARCYAKFKYVRKCDKAEKHGKPEKPEGRVERTK
CEKVYYDKGYGPHVKGYPASGESKWYDSKELPMKPYGVEGEPKYNAPRYE
PEPVPAGASYVPPVGY*
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