Ggra7585.t1 (mRNA) Gracilaria gracilis GNS1m male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGgra7585.t1
Unique NameGgra7585.t1
TypemRNA
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length217
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000866_piloncontigtig00000866_pilon:125816..126466 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7585Ggra7585Gracilaria gracilis GNS1m malegenetig00000866_pilon 125816..126466 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7585.t1.stop1Ggra7585.t1.stop1Gracilaria gracilis GNS1m malestop_codontig00000866_pilon 125816..125818 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7585.t1.CDS1Ggra7585.t1.CDS1Gracilaria gracilis GNS1m maleCDStig00000866_pilon 125816..126466 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7585.t1.exon1Ggra7585.t1.exon1Gracilaria gracilis GNS1m maleexontig00000866_pilon 125816..126466 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7585.t1.start1Ggra7585.t1.start1Gracilaria gracilis GNS1m malestart_codontig00000866_pilon 126464..126466 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Ggra7585.t1Ggra7585.t1Gracilaria gracilis GNS1m malepolypeptidetig00000866_pilon 125816..126466 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Ggra7585.t1 ID=Ggra7585.t1|Name=Ggra7585.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=217bp
MKLTLALGLCISVSGAFAAGIGAVGRNAAYQVTATPAPYVTPVPEYKATQ
PSASTPTPPPGGYTAPETGPEYVPSPAPYTGGEAPSMDNMCWMETKRCCY
KEEADGYECRDYYADKYARCYAKFKYVRKCDKAEKHGKPEKPEGRVERTK
CEKVYYDKGYGPHVKGYPASGESKWYDSKELPMKPYGVEGEPKYNAPRYE
PEPVPAGASYVPPVGY*
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spliced messenger RNA

>Ggra7585.t1 ID=Ggra7585.t1|Name=Ggra7585.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=651bp|location=Sequence derived from alignment at tig00000866_pilon:125816..126466- (Gracilaria gracilis GNS1m male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAAGCTCACTCTCGCACTCGGACTCTGCATTTCCGTCTCTGGCGCCTT
CGCTGCCGGTATTGGAGCAGTAGGCAGAAACGCCGCTTACCAGGTCACTG
CAACACCGGCTCCCTATGTCACCCCTGTCCCTGAATACAAGGCTACTCAA
CCTTCGGCTTCCACTCCAACCCCACCGCCGGGAGGATACACCGCTCCAGA
AACAGGACCTGAATACGTCCCGAGTCCCGCTCCGTACACCGGCGGTGAGG
CTCCATCCATGGACAACATGTGCTGGATGGAGACTAAGAGATGCTGCTAC
AAAGAAGAAGCCGATGGATATGAATGTCGGGACTATTATGCCGATAAATA
TGCTCGATGCTATGCTAAGTTCAAATACGTGAGAAAATGTGACAAGGCTG
AGAAGCATGGCAAGCCGGAGAAGCCGGAGGGTCGAGTGGAGAGAACCAAG
TGCGAAAAAGTGTACTACGACAAGGGCTACGGTCCCCACGTGAAGGGATA
CCCCGCCAGCGGTGAAAGCAAGTGGTATGACTCAAAGGAACTTCCGATGA
AACCGTATGGTGTTGAGGGAGAGCCGAAGTACAATGCTCCTCGTTATGAA
CCCGAGCCAGTCCCGGCAGGTGCCTCGTACGTTCCCCCGGTTGGGTATTA
G
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protein sequence of Ggra7585.t1

>Ggra7585.t1 ID=Ggra7585.t1|Name=Ggra7585.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=217bp
MKLTLALGLCISVSGAFAAGIGAVGRNAAYQVTATPAPYVTPVPEYKATQ
PSASTPTPPPGGYTAPETGPEYVPSPAPYTGGEAPSMDNMCWMETKRCCY
KEEADGYECRDYYADKYARCYAKFKYVRKCDKAEKHGKPEKPEGRVERTK
CEKVYYDKGYGPHVKGYPASGESKWYDSKELPMKPYGVEGEPKYNAPRYE
PEPVPAGASYVPPVGY*
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mRNA from alignment at tig00000866_pilon:125816..126466-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Ggra7585.t1 ID=Ggra7585.t1|Name=Ggra7585.t1|organism=Gracilaria gracilis GNS1m male|type=mRNA|length=651bp|location=Sequence derived from alignment at tig00000866_pilon:125816..126466- (Gracilaria gracilis GNS1m male)
ATGAAGCTCACTCTCGCACTCGGACTCTGCATTTCCGTCTCTGGCGCCTT
CGCTGCCGGTATTGGAGCAGTAGGCAGAAACGCCGCTTACCAGGTCACTG
CAACACCGGCTCCCTATGTCACCCCTGTCCCTGAATACAAGGCTACTCAA
CCTTCGGCTTCCACTCCAACCCCACCGCCGGGAGGATACACCGCTCCAGA
AACAGGACCTGAATACGTCCCGAGTCCCGCTCCGTACACCGGCGGTGAGG
CTCCATCCATGGACAACATGTGCTGGATGGAGACTAAGAGATGCTGCTAC
AAAGAAGAAGCCGATGGATATGAATGTCGGGACTATTATGCCGATAAATA
TGCTCGATGCTATGCTAAGTTCAAATACGTGAGAAAATGTGACAAGGCTG
AGAAGCATGGCAAGCCGGAGAAGCCGGAGGGTCGAGTGGAGAGAACCAAG
TGCGAAAAAGTGTACTACGACAAGGGCTACGGTCCCCACGTGAAGGGATA
CCCCGCCAGCGGTGAAAGCAAGTGGTATGACTCAAAGGAACTTCCGATGA
AACCGTATGGTGTTGAGGGAGAGCCGAAGTACAATGCTCCTCGTTATGAA
CCCGAGCCAGTCCCGGCAGGTGCCTCGTACGTTCCCCCGGTTGGGTATTA
G
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Coding sequence (CDS) from alignment at tig00000866_pilon:125816..126466-

>Ggra7585.t1 ID=Ggra7585.t1|Name=Ggra7585.t1|organism=Gracilaria gracilis GNS1m male|type=CDS|length=651bp|location=Sequence derived from alignment at tig00000866_pilon:125816..126466- (Gracilaria gracilis GNS1m male)
ATGAAGCTCACTCTCGCACTCGGACTCTGCATTTCCGTCTCTGGCGCCTT
CGCTGCCGGTATTGGAGCAGTAGGCAGAAACGCCGCTTACCAGGTCACTG
CAACACCGGCTCCCTATGTCACCCCTGTCCCTGAATACAAGGCTACTCAA
CCTTCGGCTTCCACTCCAACCCCACCGCCGGGAGGATACACCGCTCCAGA
AACAGGACCTGAATACGTCCCGAGTCCCGCTCCGTACACCGGCGGTGAGG
CTCCATCCATGGACAACATGTGCTGGATGGAGACTAAGAGATGCTGCTAC
AAAGAAGAAGCCGATGGATATGAATGTCGGGACTATTATGCCGATAAATA
TGCTCGATGCTATGCTAAGTTCAAATACGTGAGAAAATGTGACAAGGCTG
AGAAGCATGGCAAGCCGGAGAAGCCGGAGGGTCGAGTGGAGAGAACCAAG
TGCGAAAAAGTGTACTACGACAAGGGCTACGGTCCCCACGTGAAGGGATA
CCCCGCCAGCGGTGAAAGCAAGTGGTATGACTCAAAGGAACTTCCGATGA
AACCGTATGGTGTTGAGGGAGAGCCGAAGTACAATGCTCCTCGTTATGAA
CCCGAGCCAGTCCCGGCAGGTGCCTCGTACGTTCCCCCGGTTGGGTATTA
G
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