Ggra7579.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7579.t1
Unique NameGgra7579.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length252
Homology
BLAST of Ggra7579.t1 vs. uniprot
Match: A0A2V3IVN3 (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVN3_9FLOR)

HSP 1 Score: 300 bits (768), Expect = 4.230e-100
Identity = 166/253 (65.61%), Postives = 190/253 (75.10%), Query Frame = 0
Query:    4 SAFVQPSFSSAFTPSRARRAAVSQRPTSSTPARIVMADGEKKPFFRNPFAAKPKGP---NVPAVTFIAPQPGDPGYKEAAQAKPAXXXXXXPKTQTVTQKSGSSPQKLPVVSGD--VIKRGLDLLKEDVLKNAPERAGVGRQDSSAVVMRPQAGEPGYKPAAYQTVQVSKLGISTFSDDKNYVSKVGGIDAVKQAALDLKTGQKTGKQIKKEALMKAENIKMKAEAPKEFDIPDYLKPLPEDTPRRGRSWKNY 251
            SAFV PSF+SAFTP+R + A  S+RP++S PAR VMAD EK+PFFRNPFAAKP  P   + P+ TFIAPQPGDPGYKE A AKP                    P  LPVV+ D   IKRGLDLLK+DVLKNAPE+ GVGRQDSSAV MRPQAGEPGYKPAAYQTV+VSKLGISTFSDDKNY+  VGGIDAVK+AAL++ +G+KT KQ+K EAL K      K E    +DIPDYLKPLPEDTPR+G +WKN+
Sbjct:    2 SAFVPPSFTSAFTPARGQPATASRRPSASRPARFVMAD-EKQPFFRNPFAAKPAQPAQPDAPSTTFIAPQPGDPGYKEPAAAKPP-----------------QQPTPLPVVADDKGAIKRGLDLLKQDVLKNAPEQVGVGRQDSSAVTMRPQAGEPGYKPAAYQTVRVSKLGISTFSDDKNYLGNVGGIDAVKKAALEVVSGEKTTKQLKAEALSKVAKTAPKKETTV-YDIPDYLKPLPEDTPRKGMTWKNW 235          
BLAST of Ggra7579.t1 vs. uniprot
Match: A0A1X6P9T1 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P9T1_PORUM)

HSP 1 Score: 130 bits (327), Expect = 1.400e-32
Identity = 69/135 (51.11%), Postives = 97/135 (71.85%), Query Frame = 0
Query:  118 RGLDLLKEDVLKNAPERAGVGRQDSSAVVMRPQAGEPGYKPAAYQTVQVSKLGISTFSDDKNYVSKVGGIDAVKQAALDLKTGQKTGKQIKKEALMKAENIKMKAEAPKEFD-IPDYLKPLPEDTPRRGRSWKNY 251
            RGL LL+ED+LK+APERAG+GRQD   V   P  GEPGYK +AY+  + S LG+S+FSDD N  +K+GGI+A+K+AA++ + G     Q+K +AL   + +   AEA ++ + +P YL+PLPEDTPR+  +WKNY
Sbjct:  196 RGLGLLREDLLKSAPERAGIGRQDQVGVAA-PTYGEPGYKYSAYEKAKQSTLGVSSFSDDANAAAKIGGIEALKKAAIEARKGASAA-QLKAKALKIEKAVLSAAEAQEKTNPLPSYLQPLPEDTPRKYSTWKNY 328          
BLAST of Ggra7579.t1 vs. uniprot
Match: A0A1X6NMN9 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NMN9_PORUM)

HSP 1 Score: 101 bits (252), Expect = 8.900e-23
Identity = 72/195 (36.92%), Postives = 97/195 (49.74%), Query Frame = 0
Query:   71 PGDPGYKEAAQAK---PAXXXXXXPKTQTVTQKSGSSPQKLPVVSGDVIKRGLDLLK---EDVLKNAPERAGVGRQDSSAVVMRPQAGEPGYKPAAYQTVQVSKLGISTFSDDKNYVSKVGGIDAVK---QAALDLKTGQKTGKQIKKEALMKAENIKMKA-----EAPKEFDIPDYLKPLPEDTPRRGRSWKNY 251
            P +P  +EA + K   PA      P+   +++          V +    +RG+ L K   ED L+  P                P AGEPGYK  AYQ V+ S LGISTFSDDKNYV  VGG+ AV+   +AA +    +K  K+ KK  + +     + +      A     +PDYL+PLPEDTP  G+SWKNY
Sbjct:   23 PKEPAAEEAPKKKKAAPAPKETEAPRVSRLSRPKXXXXXXXXVSAAG--ERGVSLFKRDFEDKLQGGPTYTAA-----------PMAGEPGYKSEAYQRVKSSSLGISTFSDDKNYVGNVGGLAAVRLAAEAAEEKMAVEKAAKKAKKAGIEEPPASSLPSYLGGGSAAGSSLLPDYLRPLPEDTPAEGKSWKNY 204          
BLAST of Ggra7579.t1 vs. uniprot
Match: A0A7S0ZGH3 (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZGH3_9RHOD)

HSP 1 Score: 92.0 bits (227), Expect = 1.160e-18
Identity = 57/122 (46.72%), Postives = 72/122 (59.02%), Query Frame = 0
Query:  116 IKRGLDLLKEDVLKNAPERAGVGRQDSSAVVMRPQAGEPGYKPAAYQTVQVSKLGISTFSDDKNYVSKVGGIDAVKQAALDLKTGQKTGKQIK---KEALMKAENIKMKAEAPKEFDIPDYL 234
            +KRGL LL ED+LK  PE AGVGRQD + V   PQ GEPGY   AY+    S LGIS+F+DDKN V  VGG+ AV  AA  +K G+   + I+   KE     + +K   E    + +P YL
Sbjct:  139 MKRGLQLLVEDILKTGPEAAGVGRQDLT-VSAEPQFGEPGYVAPAYKVAMASSLGISSFADDKNSVLNVGGLQAVIDAAEKVKAGKLNAETIEETLKEGGKMIDEVKETEEIV--YSLPSYL 257          
The following BLAST results are available for this feature:
BLAST of Ggra7579.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3IVN34.230e-10065.61Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6P9T11.400e-3251.11Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6NMN98.900e-2336.92Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0ZGH31.160e-1846.72Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 229..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..111

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000866_piloncontigtig00000866_pilon:107268..108023 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7579.t1Ggra7579.t1Gracilaria gracilis GNS1m malemRNAtig00000866_pilon 107268..108023 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7579.t1 ID=Ggra7579.t1|Name=Ggra7579.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=252bp
MDCSAFVQPSFSSAFTPSRARRAAVSQRPTSSTPARIVMADGEKKPFFRN
PFAAKPKGPNVPAVTFIAPQPGDPGYKEAAQAKPAAEAKPAPKTQTVTQK
SGSSPQKLPVVSGDVIKRGLDLLKEDVLKNAPERAGVGRQDSSAVVMRPQ
AGEPGYKPAAYQTVQVSKLGISTFSDDKNYVSKVGGIDAVKQAALDLKTG
QKTGKQIKKEALMKAENIKMKAEAPKEFDIPDYLKPLPEDTPRRGRSWKN
Y*
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