Ggra7575.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7575.t1
Unique NameGgra7575.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length460
Homology
BLAST of Ggra7575.t1 vs. uniprot
Match: A0A2V3IVN8 (F-box/LRR-repeat protein 20 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVN8_9FLOR)

HSP 1 Score: 671 bits (1732), Expect = 6.590e-240
Identity = 341/427 (79.86%), Postives = 370/427 (86.65%), Query Frame = 0
Query:   33 CMSRSPARKRKSCAAVSHPLHAAAAVXXXXXXXXXXXXXXXXRRPAMRLLDLSDDALALIVSHVMSPAREGSRAIVTEDSLRASLPLALTCRTMHSLWRRCMTDLELWVSGRLTDRGLVSICAASGRSLHRLGLRRCRLSLNAFRAIPRYCPRLRSLDLSHTRVTDDVIFSLAARCGSSLQFLALHGCTALSSRALRAIADSCTHLRFLDIGAVPAVDDDTLSYLARARGSSLRTLVLSHCTKLSDTAMGEIGTHCSALMSLTVRSLASITDCGLQKLCERIGHRLQILDVLDCTGLTMGGYFSTMEAHCPHVFRYLQESNYVEHLGERCLRDNIIATMPGLIYRISATDAIRRLPALYFLLLDESTLRPFRVSVQSKSLNLSDFGTVLISNFGKKPTQKTRSVLLSRFGYDSPCDSESDDESCGRE 459
            CM+R   RKRK      HP ++                    RRP MRLLDL +DALAL+++HVM+PAREG+R+IVTEDSLRASLPLA TCR  +++WRRCMTDLELWVSGRL DRGL SICA+SGR +HRLGLRR RLSL+AFRAIPR+C +LRSLDLSHT VTDDVIFSLAARCGS LQFLALHGCT LSSRALRAIAD CTHLRFLD+G VPAVDDDTL+++ RARG++LRTLVLS C+KLSD AMG IG HCSALMSLTVRSL SITD GLQ +CE IGH LQILD+LDCTGLTMGGYFSTMEAHCPHVFRYLQESNYV+HLGERCLRDNIIATMPGLIYRISATDAIRRLPALYFLLLDESTLRPFRVSVQSKSLNLSDFGTVLISNFGKKPT KTR+VLLSRFGYDSPCDSESDDESC RE
Sbjct:   34 CMTRFLVRKRKFLHIPHHPNYS----------HPYYTALKRPRRPPMRLLDLPEDALALVMTHVMTPAREGTRSIVTEDSLRASLPLAQTCRAFYAVWRRCMTDLELWVSGRLDDRGLTSICASSGRYIHRLGLRRSRLSLHAFRAIPRFCSQLRSLDLSHTSVTDDVIFSLAARCGSKLQFLALHGCTKLSSRALRAIADMCTHLRFLDVGRVPAVDDDTLAHIVRARGATLRTLVLSDCSKLSDAAMGHIGKHCSALMSLTVRSLTSITDRGLQTMCEHIGHHLQILDLLDCTGLTMGGYFSTMEAHCPHVFRYLQESNYVDHLGERCLRDNIIATMPGLIYRISATDAIRRLPALYFLLLDESTLRPFRVSVQSKSLNLSDFGTVLISNFGKKPTPKTRNVLLSRFGYDSPCDSESDDESCARE 450          
BLAST of Ggra7575.t1 vs. uniprot
Match: R7QIH1 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIH1_CHOCR)

HSP 1 Score: 544 bits (1401), Expect = 1.240e-190
Identity = 265/381 (69.55%), Postives = 314/381 (82.41%), Query Frame = 0
Query:   79 MRLLDLSDDALALIVSHVMSPAREGSRAIVTEDSLRASLPLALTCRTMHSLWRRCMTDLELWVSGRLTDRGLVSICAASGRSLHRLGLRRCR-LSLNAFRAIPRYCPRLRSLDLSHTRVTDDVIFSLAARCGSSLQFLALHGCTALSSRALRAIADSCTHLRFLDIGAVPAVDDDTLSYLARARGSSLRTLVLSHCTKLSDTAMGEIGTHCSALMSLTVRSLASITDCGLQKLCERIGHRLQILDVLDCTGLTMGGYFSTMEAHCPHVFRYLQESNYVEHLGERCLRDNIIATMPGLIYRISATDAIRRLPALYFLLLDESTLRPFRVSVQSKSLNLSDFGTVLISNFGKKPTQKTRSVLLSRFGYDSPCDSESDDESCGR 458
            + LLDLS+D L  I++HVM+PA+EGSR I+TE+S++ASLPLA TC  ++ +WR  M DLELWVSG+L DRGL +IC  +G+ +HRLGLRRC+ +S  AF  IPR C RLRSLD+SHT + DD +  L    G SLQFLALHGC  L++R++ AIAD C HLRFLDIG++ AVDD  + YL    G S+RT+VLS+C  LSD+ M  +G  C A+MSLT+R L+SITD GL KLC  IG R+QILDVLDC GLTMGGYF+TMEA CPHVF+YL+ESNY++HLGERCLRDNIIATMPGLIYRISATDAIRRLPALYFLLLDESTLRPFRVSVQSKSLNLSDFG+VLISNFGKKPT KT+++LLSRFGYDSP DSESDDE+C R
Sbjct:    2 LHLLDLSEDILVGIMTHVMTPAKEGSRKIITEESIKASLPLATTCHALYDVWRHSMHDLELWVSGKLNDRGLEAICKGNGKGIHRLGLRRCKAISKRAFAQIPRQCSRLRSLDMSHTDIGDDFVLELTKNTGRSLQFLALHGCNKLTARSIHAIADRCPHLRFLDIGSIAAVDDAAIEYLVSRLGGSIRTMVLSNCKNLSDSGMAALGVECKAIMSLTLRGLSSITDNGLYKLCCGIGDRVQILDVLDCAGLTMGGYFATMEAFCPHVFKYLEESNYIDHLGERCLRDNIIATMPGLIYRISATDAIRRLPALYFLLLDESTLRPFRVSVQSKSLNLSDFGSVLISNFGKKPTPKTKNILLSRFGYDSPFDSESDDEACER 382          
BLAST of Ggra7575.t1 vs. uniprot
Match: uncharacterized protein LOC116126283 n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI00126398C7 (uncharacterized protein LOC116126283 n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI00126398C7)

HSP 1 Score: 66.2 bits (160), Expect = 6.930e-8
Identity = 53/176 (30.11%), Postives = 82/176 (46.59%), Query Frame = 0
Query:  134 MTDLELWVSGRLTDRGLVSICAASGRSLHRLG-LRRC---RLSLNAFRAIPRYCPRLRSLDLSHTR-VTDDVIFSLAARCGSSLQFLALHGCTALSSRALRAIADSCTHLRFLDIGAVPAVDDDTLSYLARARGSSLRTLVLSHCTKLSDTAMGEIGTHCSALMSLTVRSLASITD 304
            +T L+L   GRL D  ++S    S +SL  L  L  C   RLS    + I      LR ++LS    VT   I  LA   GS +Q L ++ C  + +  +        HL  L +  +  V DD +       G +++ LVL+ C KL+D ++  I   C+ L +L + +L  +TD
Sbjct:  413 LTVLQLDYCGRLPDHIVLSTLVRSSKSLSSLTTLSLCGASRLSDVGLQGIVSSASALRCINLSQCCFVTATSINILANSLGSVMQELYINDCQNIDAMLILPALKKLKHLEVLSVARIETVSDDFIREFLSDHGHNMKELVLTECVKLTDISLKAIAETCTGLRALDIFNLRRLTD 588          
BLAST of Ggra7575.t1 vs. uniprot
Match: J3LF45 (Uncharacterized protein n=2 Tax=Oryza brachyantha TaxID=4533 RepID=J3LF45_ORYBR)

HSP 1 Score: 63.2 bits (152), Expect = 3.290e-7
Identity = 44/161 (27.33%), Postives = 76/161 (47.20%), Query Frame = 0
Query:  210 SSLQFLALHGCTALSSRALRAIADSCTHLRFLDIGAVPAVDDDTLSYLARARGSSLRTLVLSHCTKLSDTAMGEIGTHCSALMSLTVRSLASITDCGLQKL-CERIGHRLQILDVLDCTGLTMGGYFSTMEA----------HCPHVFRYLQESNYVEHLG 359
            SSL  L L  C  ++ +++ A+A+ C +L  L IG            L+ A  SSL+ L +  C K++D+++  + ++C  L+++ V     ITD   Q +        L++L V  C GLT+ G  + +E+           CP V R + E   ++  G
Sbjct:  173 SSLVSLKLLDCNKVTDKSIHALANFCHNLETLVIGGXXXXXXXXXXALSLACCSSLKCLRMDWCLKITDSSLRSLFSNCKLLVAIDVGCCDQITDAAFQDMNTNGFQSELRLLKVSSCIGLTVAGVSNVIESCKALEHLDVRSCPQVTRQICEQAGLQFPG 333          
BLAST of Ggra7575.t1 vs. uniprot
Match: A0A5A7UQM3 (Leucine-rich repeat, cysteine-containing subtype n=2 Tax=Cucumis melo TaxID=3656 RepID=A0A5A7UQM3_CUCME)

HSP 1 Score: 63.9 bits (154), Expect = 4.030e-7
Identity = 54/177 (30.51%), Postives = 85/177 (48.02%), Query Frame = 0
Query:  137 LELWVSGR-LTDRGLVSICAASGRSLHRLG----LRRCRLSLNAFRAIPRYCPRLRSLDLSHTR-VTDDVIFSLAARCGSSLQFLALHGCTALSSRALRAIADSCTHLRFLDIGAVPAVDDDTLSYLARARGSSLRTLVLSHCTKLSDTAMGEIGTHCSALMSLTVRSLASITDCGL 307
            L+L+  GR + D  L+S  A S  SL  L        C LS     A+    P L+SL+LS    +T   I S+A   GS+L+ L L  C  +    +    +   HL  L +  +  V D  +     A G +L+ L+L+ C KL++ ++  I   CSAL ++ + +L+ +TD  L
Sbjct:  555 LQLYQCGRSIFDIVLLSTLARSSNSLPALKSLSLTGACSLSDVGVAALVCSAPALQSLNLSQCSFLTFSSIDSIANSLGSTLRELYLDDCLKIDPMLMLPAMNKLQHLEVLSLAGMEDVCDKFIQEFLTAGGRNLKELILTDCVKLTNKSIKAISETCSALRAIDLMNLSKLTDYAL 731          
BLAST of Ggra7575.t1 vs. uniprot
Match: F6HGN8 (Uncharacterized protein n=5 Tax=Vitis TaxID=3603 RepID=F6HGN8_VITVI)

HSP 1 Score: 62.8 bits (151), Expect = 9.220e-7
Identity = 44/158 (27.85%), Postives = 74/158 (46.84%), Query Frame = 0
Query:  132 RCMTDLELWVSGRLTDRGLVSICAASGRSLHRLGLRRCRLSLNAFRAIPRYCPRLRSLDLSH-TRVTDDVIFSLAARCGSSLQFLALHGCTALSSRALRAIADSCTHLRFLDIGAVPAVDDDTLSYLARARGSSLRTLVLSHCTKLSDTAMGEIGTHC 288
            RCMTD  L  +  +   GL ++   S +         CRLS    RA+    P LRS++LS  + +T   I +LA   GS L+ L +  C  + +  + +  +    L  L +  +  V DD +       G +++ LVL+ C++L+D ++  I   C
Sbjct:  550 RCMTDYVLRATFDMLSNGLPALTTVSLKGA-------CRLSDAGLRALVSSAPMLRSINLSQCSLLTSASIKNLAETLGSVLRELYIDDCQGIDAMLILSALEKLECLEVLSVAGIQTVCDDFIWEFISVHGPTMKELVLTDCSRLTDFSLKAIAETC 700          
BLAST of Ggra7575.t1 vs. uniprot
Match: A0A8J5IQG0 (Uncharacterized protein n=3 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5IQG0_ZINOF)

HSP 1 Score: 62.4 bits (150), Expect = 1.170e-6
Identity = 64/228 (28.07%), Postives = 97/228 (42.54%), Query Frame = 0
Query:  134 MTDLELWVSGRLTDRGLVSICAASGRSLHRLGLRRC-RLSLNAFRAIPRYC-PRLRSLDLSHTRVTDDVIFSLAA--RCGSSLQFLALHGCTALSSRALRAIADSCTHLRFLDIGAVPAVDDDTL---------------------------SYLARARGSSLRTLVLSHCTKLSDTAMGEIGTHCSALMSLTVRSLASITDCGLQKLCERIGHRLQILDVLDCTGLT 330
            +  L +  S  L+D GLVS      R+L  L +  C +L+L         C P L+SL L       D+ F+ A    C  SL+ L +  C  ++S +L+ +   C  L+ LD G    V D +L                           + L +A GS+L+TL L  C K++D +   I   C  L  L + S  SI D G+  L       L++L + +CT +T
Sbjct:  504 LKQLSVHKSCDLSDTGLVSF-TEKARALENLHIEDCHQLTLMGVLGALLTCNPELKSLSLVRCLGIKDIDFAPAQLPSC-KSLESLTIRNCPGVTSASLQMVGKICPQLQKLDFGGQSGVTDASLVPLIQSSEAGFVDVNLSGCVNVSDSLVTMLVKAHGSTLKTLSLDGCRKITDRSTMAIAQGCLVLEELDL-SCCSIGDYGVAILASARQLNLRMLSLANCTKVT 728          
BLAST of Ggra7575.t1 vs. uniprot
Match: A0A6P8JB36 (uncharacterized protein LOC116308603 isoform X1 n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8JB36_ACTTE)

HSP 1 Score: 62.4 bits (150), Expect = 1.410e-6
Identity = 39/122 (31.97%), Postives = 57/122 (46.72%), Query Frame = 0
Query:  183 CPRLRSLDLSHTRVTDDVIFSLAARCGSSLQFLALHGCTALSSRALRAIADSCTHLRFLDIGAVPAVDDDTLSYLARARGSSLRTLVLSHCTKLSDTAMGEIGTHCSALMSLTVRSLASITD 304
            CPRL++L L+ T VTD  +F+LA +CG  L+ L L  C  L+ R   A+A+SCT                            L++  L  CT  S   M  +  +C ++ SL V S+  +TD
Sbjct: 1222 CPRLKTLSLAETSVTDITMFALAEKCGDKLRDLDLSWCEELTDRGRCAMAESCT---------------------------GLQSFALRQCTA-SRITMETLSIYCQSMTSLNVSSVGQLTD 1315          
BLAST of Ggra7575.t1 vs. uniprot
Match: A0A2J7PGU4 (Uncharacterized protein n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7PGU4_9NEOP)

HSP 1 Score: 58.5 bits (140), Expect = 5.620e-6
Identity = 49/152 (32.24%), Postives = 73/152 (48.03%), Query Frame = 0
Query:  161 LHRLGLRRCRLSLNA---FRAIPRYCPRLRSLDLSHTRVTDDVIFSLAARCGSSLQFLALHGCTALSSRALRAIADSCTHLRFLDIGAVPAVDDDTLSYLARARGSSLRTLVLSHCTKLSDTAMGEIGTHCSALMSLTVRSLASITDCGLQK 309
            L +L LR C LS ++     +I  + P L  L L       +  +SL  R    L  L L     LS +A+R IA+SC HL+ L++  V  + DD + ++ +  GS L TL+L     L+D A   +  +C  L  L V     +T+ GL K
Sbjct:    7 LKKLNLRFCSLSEDSTGLLASIVAFYPNLEELTLKGCFPLTEAGYSLIPRL-KKLSVLDLSHSEELSGKAVRLIAESCQHLKKLNLDDVRKISDDDVVHIIKKLGSQLITLILDG-EDLTDVAFSNLS-NCVRLQELEVSFCDQMTNKGLLK 155          
BLAST of Ggra7575.t1 vs. uniprot
Match: A0A0A9S4X5 (Uncharacterized protein n=2 Tax=Arundo donax TaxID=35708 RepID=A0A0A9S4X5_ARUDO)

HSP 1 Score: 59.3 bits (142), Expect = 7.200e-6
Identity = 43/149 (28.86%), Postives = 71/149 (47.65%), Query Frame = 0
Query:  210 SSLQFLALHGCTALSSRALRAIADSCTHLRFLDIGAVPAVDDDTLSYLARARGSSLRTLVLSHCTKLSDTAMGEIGTHCSALMSLTVRSLASITDCGLQKL-CERIGHRLQILDVLDCTGLTMGGYFSTMEA----------HCPHVFR 347
            S L  L L  C  +  +++ ++A  C +L  L IG    + D ++  LA A  SSLR+L +  C K++D ++  + ++C  L+++ V     ITD   Q +        L+IL +  C  LT+ G  S +E+           CP V R
Sbjct:  236 SCLVSLKLLDCIKVEDKSIYSLAKFCHNLETLVIGGCQNISDASIEALALACSSSLRSLRMDWCLKITDASLQTLLSNCK-LVAIDVGCCGQITDAAFQGMEGNDFQSELKILKISSCIRLTVAGISSVVESCKALEYLDVRSCPQVTR 383          
The following BLAST results are available for this feature:
BLAST of Ggra7575.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A2V3IVN86.590e-24079.86F-box/LRR-repeat protein 20 n=1 Tax=Gracilariopsis... [more]
R7QIH11.240e-19069.55Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
uncharacterized protein LOC116126283 n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI00126398C76.930e-830.11uncharacterized protein LOC116126283 n=1 Tax=Pista... [more]
J3LF453.290e-727.33Uncharacterized protein n=2 Tax=Oryza brachyantha ... [more]
A0A5A7UQM34.030e-730.51Leucine-rich repeat, cysteine-containing subtype n... [more]
F6HGN89.220e-727.85Uncharacterized protein n=5 Tax=Vitis TaxID=3603 R... [more]
A0A8J5IQG01.170e-628.07Uncharacterized protein n=3 Tax=Zingiber officinal... [more]
A0A6P8JB361.410e-631.97uncharacterized protein LOC116308603 isoform X1 n=... [more]
A0A2J7PGU45.620e-632.24Uncharacterized protein n=1 Tax=Cryptotermes secun... [more]
A0A0A9S4X57.200e-628.86Uncharacterized protein n=2 Tax=Arundo donax TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 235..260
e-value: 83.0
score: 7.4
coord: 288..313
e-value: 13.0
score: 13.5
coord: 209..234
e-value: 13.0
score: 13.5
coord: 183..207
e-value: 1.6
score: 17.7
coord: 262..287
e-value: 0.33
score: 20.0
coord: 158..182
e-value: 340.0
score: 2.6
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 224..367
e-value: 8.7E-18
score: 66.3
coord: 80..223
e-value: 9.7E-16
score: 59.6
NoneNo IPR availablePANTHERPTHR13382MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR Bcoord: 104..271
coord: 249..354
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 24..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..459
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 121..330

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000866_piloncontigtig00000866_pilon:101689..103068 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7575.t1Ggra7575.t1Gracilaria gracilis GNS1m malemRNAtig00000866_pilon 101689..103068 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7575.t1 ID=Ggra7575.t1|Name=Ggra7575.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=460bp
MPPFKAQSATRLAAAFSSHLFVAAPSSPPAPSCMSRSPARKRKSCAAVSH
PLHAAAAVAAAAAATAAATPAKRPRRPAMRLLDLSDDALALIVSHVMSPA
REGSRAIVTEDSLRASLPLALTCRTMHSLWRRCMTDLELWVSGRLTDRGL
VSICAASGRSLHRLGLRRCRLSLNAFRAIPRYCPRLRSLDLSHTRVTDDV
IFSLAARCGSSLQFLALHGCTALSSRALRAIADSCTHLRFLDIGAVPAVD
DDTLSYLARARGSSLRTLVLSHCTKLSDTAMGEIGTHCSALMSLTVRSLA
SITDCGLQKLCERIGHRLQILDVLDCTGLTMGGYFSTMEAHCPHVFRYLQ
ESNYVEHLGERCLRDNIIATMPGLIYRISATDAIRRLPALYFLLLDESTL
RPFRVSVQSKSLNLSDFGTVLISNFGKKPTQKTRSVLLSRFGYDSPCDSE
SDDESCGRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006553Leu-rich_rpt_Cys-con_subtyp
IPR032675LRR_dom_sf