Ggra7571.t1 (polypeptide) Gracilaria gracilis GNS1m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGgra7571.t1
Unique NameGgra7571.t1
Typepolypeptide
OrganismGracilaria gracilis GNS1m male (Gracilaria gracilis GNS1m male (Slender Wart Weed))
Sequence length212
Homology
BLAST of Ggra7571.t1 vs. uniprot
Match: A0A2V3IS45 (20 kDa chaperonin, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS45_9FLOR)

HSP 1 Score: 351 bits (900), Expect = 3.120e-121
Identity = 167/211 (79.15%), Postives = 194/211 (91.94%), Query Frame = 0
Query:    1 MTAAAASHTLDGRTISGPLQPVGQNILVKIAESPDTTTGGLFLAATAKEKPTYGEAIEVGPGKYFPNGIHVPMNVKKGDYVLYGKYGGTDLDYDGDKHTIVTQDDILCKLQDGEYSASAVQPIQDRMLVKVDEAAEETSSGILLSKTAKTKSTSGKVVAMGPGRYMENGEMEPLAFQVGDTVYYGKYSGSEVEFGGDQYMVIRMADVYAKL 211
            MTAAAASHT++G++ISGPLQPVGQN+LVKIAE+ DTT GGL L  +AKEKPTYGE +E G GK+FPNG+ VPM++ KG+YVLYGKYGGTDLDYDGDKHTIVTQDD+LCKL +GEYSASAV+PI DR+LVKV+E+AEETSSGI+LSKTAK KSTSGKVVAMGPGR+MENG+ EP AF VGDTV+YGKYSG+EVEFGGD YM+IR+ADVYAK+
Sbjct:    1 MTAAAASHTVNGKSISGPLQPVGQNLLVKIAEAADTTAGGLILTGSAKEKPTYGEVVEAGSGKFFPNGMQVPMSISKGEYVLYGKYGGTDLDYDGDKHTIVTQDDVLCKLANGEYSASAVEPILDRLLVKVEESAEETSSGIILSKTAKEKSTSGKVVAMGPGRFMENGQTEPPAFAVGDTVFYGKYSGTEVEFGGDAYMLIRVADVYAKV 211          
BLAST of Ggra7571.t1 vs. uniprot
Match: R7QHL2 (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHL2_CHOCR)

HSP 1 Score: 307 bits (787), Expect = 1.480e-103
Identity = 142/210 (67.62%), Postives = 177/210 (84.29%), Query Frame = 0
Query:    1 MTAAAASHTLDGRTISGPLQPVGQNILVKIAESPDTTTGGLFLAATAKEKPTYGEAIEVGPGKYFPNGIHVPMNVKKGDYVLYGKYGGTDLDYDGDKHTIVTQDDILCKLQDGEYSASAVQPIQDRMLVKVDEAAEETSSGILLSKTAKTKSTSGKVVAMGPGRYMENGEMEPLAFQVGDTVYYGKYSGSEVEFGGDQYMVIRMADVYAK 210
            MTAA A+HTL+G+T+ GP+QP GQNILVK+AE+  TTTGGL L++TAKEKPTYGEA+EVGPG++F NG+ +PM V KGD+VLYGKYGGTD+DYDG+KHT+VTQDDILCKL  GEY  SAV PI DRML+KVD+A EET  GI++++    K+TSG VVA+G GR+MENGE EP AF VG+ V YGKY+G+EVEF G+ YM++R AD++AK
Sbjct:   32 MTAATATHTLNGKTLPGPVQPAGQNILVKVAEAQATTTGGLILSSTAKEKPTYGEAVEVGPGRHFGNGVKIPMAVNKGDFVLYGKYGGTDVDYDGEKHTVVTQDDILCKLSGGEYKPSAVVPIFDRMLIKVDQAKEETGGGIIMARNTAEKATSGTVVALGEGRFMENGETEPAAFAVGEIVLYGKYAGTEVEFDGETYMLVRTADIFAK 241          
BLAST of Ggra7571.t1 vs. uniprot
Match: A0A7S0ZES1 (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZES1_9RHOD)

HSP 1 Score: 239 bits (611), Expect = 1.620e-76
Identity = 110/211 (52.13%), Postives = 156/211 (73.93%), Query Frame = 0
Query:    1 MTAAAASHTLDGRTISGPLQPVGQNILVKIAESPDTTTGGLFLAATAKEKPTYGEAIEVGPGKYFPNGIHVPMNVKKGDYVLYGKYGGTDLDYDGDKHTIVTQDDILCKLQDGEYSASAVQPIQDRMLVKVDEAAEETSSGILLSKTAKTKSTSGKVVAMGPGRYMENGEMEPLAFQVGDTVYYGKYSGSEVEFGGDQYMVIRMADVYAKL 211
            +T   + H L+G  ++ P + +  N+LVK+AE+P+ T+GGLFL + AKEKP YG  +  GPG YFP+G  +PM +++GD VL+GKYGG ++ YDG+KH IVTQDD+LCK ++G YS  A++P+ DR+L+K D+ AE+TS G+ LS TA  K TSG+V A+G GR MENGE EP AF+VG+ V YGKY+G++V F G  Y+++R+ D+ A L
Sbjct:   53 VTDEKSEHVLNGLKLNAPFRALRNNVLVKLAEAPEQTSGGLFLTSEAKEKPNYGMVVSAGPGTYFPSGGKIPMVLEEGDTVLFGKYGGDEVVYDGEKHIIVTQDDVLCKFENGNYSVGALKPLFDRVLIKKDKGAEQTSGGLTLSTTAIEKPTSGEVTALGDGRLMENGEFEPHAFKVGNRVMYGKYAGTDVSFEGVDYILVRVTDIIATL 263          
BLAST of Ggra7571.t1 vs. uniprot
Match: A0A5J4YN10 (20 kDa chaperonin, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YN10_PORPP)

HSP 1 Score: 237 bits (604), Expect = 3.740e-75
Identity = 111/209 (53.11%), Postives = 151/209 (72.25%), Query Frame = 0
Query:    3 AAAASHTLDGRTISGPLQPVGQNILVKIAESPDTTTGGLFLAATAKEKPTYGEAIEVGPGKYFPNGIHVPMNVKKGDYVLYGKYGGTDLDYDGDKHTIVTQDDILCKLQDGEYSASAVQPIQDRMLVKVDEAAEETSSGILLSKTAKTKSTSGKVVAMGPGRYMENGEMEPLAFQVGDTVYYGKYSGSEVEFGGDQYMVIRMADVYAKL 211
            A  AS TL+G TI  PL+ V  N+LVKIAE+P+ T GGL LA  A EKP YG A+ VG G +FP+G  + M++ + D VL+G YGG ++ YDG KH  +TQDD+LC  + GEY A AV+P+ DR+ VK D+   ET+SG+ LS  A  K TSG+V++ GPGR MENG+ EP+ F+VG+ V +GKYSGSEV+F G +Y+++R+AD++A L
Sbjct:   77 AVLASRTLNGATIERPLRAVRNNVLVKIAEAPEKTAGGLLLATEAMEKPNYGVAVSVGEGAFFPSGGKIDMSINENDVVLFGSYGGDEITYDGAKHAFITQDDVLCYFEGGEYKADAVRPVYDRVFVKKDKGVTETASGLTLSTNAVEKPTSGEVISHGPGRLMENGQYEPVQFKVGERVMFGKYSGSEVKFDGVEYVLVRVADIFAVL 285          
BLAST of Ggra7571.t1 vs. uniprot
Match: A0A1X6NXP6 (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NXP6_PORUM)

HSP 1 Score: 229 bits (585), Expect = 3.010e-73
Identity = 111/207 (53.62%), Postives = 150/207 (72.46%), Query Frame = 0
Query:    4 AAASHTLDGRTISGPLQPVGQNILVKIAESPDTTTGGLFLAATAKEKPTYGEAIEVGPGKYFPNGIHVPMNVKKGDYVLYGKYGGTDLDYDGDKHTIVTQDDILCKLQDGEYSASAVQPIQDRMLVKVDEAAEETSSGILLSKTA-KTKSTSGKVVAMGPGRYMENGEMEPLAFQVGDTVYYGKYSGSEVEFGGDQYMVIRMADVYA 209
            A+++H L+G TISGPL P    ++V++A  P+TTTGGL L+  A EKP+YGE +  GPG YFP G  +PM V  G+ VLYGKYGGT+L YD  K T+VTQDD+LCKL+ G Y+A AV+PI DR+ VK  +A   +  GI+L+  A   +  +G+VVA+GPGR MENGE EPL+F  G  V + K+ G+EV+FG D+Y+V+R+AD+YA
Sbjct:    7 ASSTHELNGTTISGPLVPARNYLMVRVASPPETTTGGLILSTAAVEKPSYGEVLSTGPGAYFPAGGLIPMVVAVGETVLYGKYGGTELQYDNAKTTLVTQDDVLCKLKGGAYAADAVEPILDRVFVKKAKAEAASGGGIVLTAGAGSAERNTGEVVAVGPGRLMENGETEPLSFGAGARVLFAKFGGTEVKFGADEYVVLRVADIYA 213          
BLAST of Ggra7571.t1 vs. uniprot
Match: K0T1C8 (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T1C8_THAOC)

HSP 1 Score: 179 bits (455), Expect = 3.400e-53
Identity = 94/204 (46.08%), Postives = 130/204 (63.73%), Query Frame = 0
Query:   10 LDGRTISGPLQPVGQNILVKIAESPDTTTGGLFLAATAKEKPTYGEAIEVGPGK-YFPNGIHVPMNVKKGDYVLYGKYGGTDLDYDGDKHTIVTQDDILCKLQDGEYSASAVQPIQDRMLVKVDEAAEETSSGILLSKTAKT--KSTSGKVVAMGPGRYMENGEMEPLAFQVGDTVYYGKYSGSEVEFGGDQYMVIRMADVYAK 210
            L+GR I G L P    +LVKIA   D T GG+ L  +AK K T G  I  GPGK +  +G+  PM V+ GD V+YGKY GT+++YDGDKHT++  DDIL K +  + +      I D +LVKVD+  EET+SG+L++ +AK   K ++G VV +GPGR   NGE+  +   VGD V Y  ++G+EV   GD++ V+RM D+ AK
Sbjct:   38 LEGREIEGALTPTNNFVLVKIAPIEDETEGGILLTGSAKIKKTEGTVISAGPGKTHQESGLLFPMPVESGDGVVYGKYDGTEVEYDGDKHTLIRDDDILVKFKGDKLTLDTADVISDNVLVKVDDDGEETASGLLIAASAKKGGKPSTGTVVKVGPGRMASNGEIMTVDIGVGDMVKYRDFAGNEVTIEGDEFSVVRMTDILAK 241          
BLAST of Ggra7571.t1 vs. uniprot
Match: M1UWX1 (Probable chloroplast chaperonin CPN21 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UWX1_CYAM1)

HSP 1 Score: 179 bits (453), Expect = 1.680e-52
Identity = 93/213 (43.66%), Postives = 142/213 (66.67%), Query Frame = 0
Query:    3 AAAASHTLDGRTISGPLQPVGQNILVKIAESPDTTTGGLFLAATAKEKPTYGEAIEVGPGKYFPNG-IHVPMNVKKGDYVLYGKYGGTDLDYDGDKHTIVTQDDILCKLQDGEYS-ASAVQPIQDRMLVKVDEAAEETS-SGILLSKTAKTK--STSGKVVAMGPGRYMENGEMEPLAFQVGDTVYYGKYSGSEVEFGGDQYMVIRMADVYAK 210
            A + +H+++  T  GP+Q +G+ +LV++      T GG+ LA +A+EKP+ G  + VG G + PN  + +PM VK GD VL+GKYGGT++  D + H  V+ DDIL     G+     A++P+ DR+LV++++  E  S SGI+++ TA     + +G+VVA+GPGR+M NGE EP+  QVG+ V + KYSGSEV+FG  +Y V+R+AD+ AK
Sbjct:   58 ATSGTHSINSYTTGGPVQALGRYVLVRLDRKETQTVGGIVLAESAQEKPSRGTVVSVGGGAWHPNAPVKMPMAVKPGDVVLFGKYGGTEVKMDDEDHVFVSMDDILGVYDGGKVDDPQALKPVFDRVLVQMEKKTERRSASGIIVAPTASVDEDAKAGRVVAVGPGRFMVNGEYEPVPVQVGEWVMFRKYSGSEVKFGDQEYNVVRIADLLAK 270          
BLAST of Ggra7571.t1 vs. uniprot
Match: B8CCQ7 (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CCQ7_THAPS)

HSP 1 Score: 173 bits (439), Expect = 8.300e-51
Identity = 92/207 (44.44%), Postives = 133/207 (64.25%), Query Frame = 0
Query:    7 SHTLDGRTISGPLQPVGQNILVKIAESPDTTTGGLFLAATAKEKPTYGEAIEVGPGK-YFPNGIHVPMNVKKGDYVLYGKYGGTDLDYDGDKHTIVTQDDILCKLQDGEYSASAVQPIQDRMLVKVDEAAEETSSGILLSKTAK--TKSTSGKVVAMGPGRYMENGEMEPLAFQVGDTVYYGKYSGSEVEFGGDQYMVIRMADVYAK 210
            S  L+GR I G L P    +LVK+AE  + T GG+ L  +AK K T G  I  GPGK +  +GI  PM V  G+ V+YGKY GT++ YDGD+HT++  DDIL K  DG+ +   V  + D +LVKV++  E TS G+L++ T+K  +K ++G+VV +GPGR   NGE+  +   VGD V +  ++G+EV+  G++Y V+RM D+ AK
Sbjct:   34 SVKLEGREIDGVLTPTNNFVLVKVAEIEEETAGGILLTGSAKIKKTEGTVISTGPGKTHQESGILFPMPVTPGNGVVYGKYDGTEIVYDGDRHTLIRDDDILVKF-DGKLTLDNVDVVSDNVLVKVNDDQEATSGGLLIAATSKKGSKPSTGEVVKVGPGRMASNGEIMTVDISVGDEVKFRDFAGNEVQIEGEEYAVVRMTDILAK 239          
BLAST of Ggra7571.t1 vs. uniprot
Match: A0A7S2ZWA5 (Hypothetical protein n=5 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZWA5_9RHOD)

HSP 1 Score: 172 bits (435), Expect = 3.960e-50
Identity = 86/208 (41.35%), Postives = 129/208 (62.02%), Query Frame = 0
Query:    4 AAASHTLDGRTISGPLQPVGQNILVKIAESPDTTTGGLFLAATAKEKPTYGEAIEVGPG-KYFPNGIHVPMNVKKGDYVLYGKYGGTDLDYDGDKHTIVTQDDILCKLQDGEYSASAVQPIQDRMLVKVDEAAEETSSGILLSKTAKTKSTSGKVVAMGPGRYMENGEMEPLAFQVGDTVYYGKYSGSEVEFGGD-QYMVIRMADVYA 209
            A   H L GR I+G   P+   +  K A +PD+T GGL LA  AKEKP +G  + VG G  Y   GI +PM VK GD V++G++GG ++ YD  KH  V Q D+LCKL++G+Y    V+P+ D++ VKV    ++T+SGI+++  A      G+V++ GPGR +ENGE E +    G +V +G Y G+++ F  D +Y+ +R +D+ A
Sbjct:   37 ATDEHELQGRKITGTPVPIRNYVFAKRAAAPDSTEGGLVLADVAKEKPNFGTVLAVGDGGSYRLTGIKMPMVVKPGDSVVFGRFGGLEVTYDNSKHIFVDQFDLLCKLKEGDYKPENVEPLFDKVFVKVARKMDQTASGIMIAPGATESKNMGEVISAGPGRALENGEYEEMPVSAGQSVLWGDYVGTKLAFDRDNEYVFLRASDLLA 244          
BLAST of Ggra7571.t1 vs. uniprot
Match: M2X640 (Chaperonin GroES n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X640_GALSU)

HSP 1 Score: 169 bits (427), Expect = 1.610e-48
Identity = 84/205 (40.98%), Postives = 135/205 (65.85%), Query Frame = 0
Query:    8 HTLDGRTISGPLQPVGQNILVKIAESPDTTTGGLFLA-ATAKEKPTYGEAIEVGPGKYFPNG-IHVPMNVKKGDYVLYGKYGGTDLDYDGDKHTIVTQDDILCKLQDGEYSASAVQPIQDRMLVKVDEAAEETSSGILLSKTAKTKSTSGKVVAMGPGRYMENGEMEPLAFQVGDTVYYGKYSGSEVEFGGDQYMVIRMADVYAK 210
            H ++G   S  L P+   +LVK A   + T+ GL +A +++ ++   G  + VGPG + P      P+ V+ GD++L GKYGG  +D DG KH +++Q+DILC LQ G+   S+++PI DR+++K  ++ +ET+SGI+++ + +   T G+VVA+GPGR +++G+ EP+   VGD V Y KYSG+E  FGGD Y+++R +D  AK
Sbjct:   75 HRINGFPASRDLVPLRNYVLVKFATPEEQTSSGLLIARSSSDDQAVQGTVVAVGPGSFLPKTKARGPLAVQPGDFILAGKYGGQRIDIDGHKHFLLSQEDILCTLQGGKKEVSSIKPIFDRVVLKKIKSEQETASGIVIAASNELP-TIGEVVAVGPGRLLDDGQYEPIELSVGDHVVYSKYSGNEYRFGGDDYIIVRASDCVAK 278          
The following BLAST results are available for this feature:
BLAST of Ggra7571.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IS453.120e-12179.1520 kDa chaperonin, chloroplastic n=1 Tax=Gracilari... [more]
R7QHL21.480e-10367.62Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0ZES11.620e-7652.13Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4YN103.740e-7553.1120 kDa chaperonin, chloroplastic n=1 Tax=Porphyrid... [more]
A0A1X6NXP63.010e-7353.62Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
K0T1C83.400e-5346.08Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
M1UWX11.680e-5243.66Probable chloroplast chaperonin CPN21 n=1 Tax=Cyan... [more]
B8CCQ78.300e-5144.44Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2ZWA53.960e-5041.35Hypothetical protein n=5 Tax=Rhodosorus marinus Ta... [more]
M2X6401.610e-4840.98Chaperonin GroES n=1 Tax=Galdieria sulphuraria Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020818GroES chaperonin familyPRINTSPR00297CHAPERONIN10coord: 142..163
score: 45.83
coord: 177..189
score: 51.28
coord: 120..135
score: 35.29
coord: 198..211
score: 23.51
IPR020818GroES chaperonin familySMARTSM00883Cpn10_2coord: 119..211
e-value: 6.2E-34
score: 128.7
coord: 18..110
e-value: 7.1E-30
score: 115.3
IPR020818GroES chaperonin familyPFAMPF00166Cpn10coord: 120..210
e-value: 7.9E-26
score: 89.9
coord: 19..109
e-value: 6.1E-25
score: 87.1
IPR020818GroES chaperonin familyPANTHERPTHR1077210 KDA HEAT SHOCK PROTEINcoord: 19..108
coord: 120..209
IPR020818GroES chaperonin familyHAMAPMF_00580CH10coord: 18..111
score: 19.028122
IPR020818GroES chaperonin familyHAMAPMF_00580CH10coord: 119..211
score: 18.601618
IPR020818GroES chaperonin familyCDDcd00320cpn10coord: 120..211
e-value: 3.87165E-31
score: 107.593
IPR020818GroES chaperonin familyCDDcd00320cpn10coord: 18..110
e-value: 2.04638E-30
score: 105.667
IPR037124GroES chaperonin superfamilyGENE3D2.30.33.40GroES chaperonincoord: 117..211
e-value: 1.0E-30
score: 107.9
coord: 17..116
e-value: 1.1E-29
score: 104.6
NoneNo IPR availablePANTHERPTHR10772:SF2410 KDA CHAPERONINcoord: 120..209
coord: 19..108
IPR018369Chaperonin GroES, conserved sitePROSITEPS00681CHAPERONINS_CPN10coord: 120..144
IPR011032GroES-like superfamilySUPERFAMILY50129GroES-likecoord: 19..110
IPR011032GroES-like superfamilySUPERFAMILY50129GroES-likecoord: 120..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000866_piloncontigtig00000866_pilon:95414..96049 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria gracilis GNS1m male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Ggra7571.t1Ggra7571.t1Gracilaria gracilis GNS1m malemRNAtig00000866_pilon 95414..96049 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Ggra7571.t1 ID=Ggra7571.t1|Name=Ggra7571.t1|organism=Gracilaria gracilis GNS1m male|type=polypeptide|length=212bp
MTAAAASHTLDGRTISGPLQPVGQNILVKIAESPDTTTGGLFLAATAKEK
PTYGEAIEVGPGKYFPNGIHVPMNVKKGDYVLYGKYGGTDLDYDGDKHTI
VTQDDILCKLQDGEYSASAVQPIQDRMLVKVDEAAEETSSGILLSKTAKT
KSTSGKVVAMGPGRYMENGEMEPLAFQVGDTVYYGKYSGSEVEFGGDQYM
VIRMADVYAKL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020818Chaperonin_GroES
IPR037124Chaperonin_GroES_sf
IPR018369Chaprnonin_Cpn10_CS
IPR011032GroES-like_sf